Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn3g21307 Nelumbo nucifera HOM05D000707 ORTHO05D008008 3.7e-131 471.5 228 100.0
TAR636G1228 Trochodendron aralioides HOM05D000707 ORTHO05D008008 2.9e-27 126.3 104 66.3
Nn4g26014 Nelumbo nucifera HOM05D000707 ORTHO05D008008 5.2e-24 115.5 99 63.6
Lsat_1_v5_gn_9_4901 Lactuca sativa HOM05D000707 ORTHO05D008008 3.2e-21 106.3 103 61.2
Lj2A1186G33 Lonicera japonica HOM05D000707 ORTHO05D008008 5.0e-19 99.0 101 60.4
TWI23G0773 Tripterygium wilfordii HOM05D000707 ORTHO05D008008 5.0e-19 99.0 99 55.6
vmacro02501 Vaccinium macrocarpon HOM05D000707 ORTHO05D008008 1.5e-18 97.4 95 56.8
PGSC0003DMG400011378 Solanum tuberosum HOM05D000707 ORTHO05D008008 1.9e-18 97.1 97 56.7
CSS0014157 Camellia sinensis var. sinensis HOM05D000707 ORTHO05D008008 7.3e-18 95.1 101 53.5
PSO210G0725 Papaver somniferum HOM05D000707 ORTHO05D008008 1.2e-17 94.4 96 54.2
CAN.G426.34 Capsicum annuum HOM05D000707 ORTHO05D008008 1.6e-17 94.0 100 55.0
GSVIVG01010991001 Vitis vinifera HOM05D000707 ORTHO05D008008 2.8e-17 93.2 113 50.4
ECA247G2474 Erigeron canadensis HOM05D000707 ORTHO05D008008 4.7e-17 92.4 95 56.8
Nitab4.5_0000824g0040 Nicotiana tabacum HOM05D000707 ORTHO05D008008 4.7e-17 92.4 100 55.0
Peaxi162Scf00067g01119 Petunia axillaris HOM05D000707 ORTHO05D008008 4.7e-17 92.4 98 55.1
TWI14G0931 Tripterygium wilfordii HOM05D000707 ORTHO05D008008 8.1e-17 91.7 99 51.5
PSO170G1056 Papaver somniferum HOM05D000707 ORTHO05D008008 1.8e-16 90.5 102 50.0
TPR.G32301 Trifolium pratense HOM05D000707 ORTHO05D008008 3.1e-16 89.7 100 53.0
Ah.08g212620 Amaranthus hybridus HOM05D000707 ORTHO05D008008 4.0e-16 89.4 95 53.7
Lj1g0005138 Lotus japonicus HOM05D000707 ORTHO05D008008 4.0e-16 89.4 173 37.6
Nitab4.5_0009550g0010 Nicotiana tabacum HOM05D000707 ORTHO05D008008 5.2e-16 89.0 100 53.0
TWI59G0050 Tripterygium wilfordii HOM05D000707 ORTHO05D008008 5.2e-16 89.0 99 49.5
Sopen09g029390 Solanum pennellii HOM05D000707 ORTHO05D008008 6.8e-16 88.6 98 53.1
CiPaw.07G101200 Carya illinoinensis HOM05D000707 ORTHO05D008008 8.9e-16 88.2 101 52.5
AUR62034638 Chenopodium quinoa HOM05D000707 ORTHO05D008008 8.9e-16 88.2 104 49.0
Lalb_Chr15g0078751 Lupinus albus HOM05D000707 ORTHO05D008008 8.9e-16 88.2 98 53.1
Medtr7g108150 Medicago truncatula HOM05D000707 ORTHO05D008008 8.9e-16 88.2 100 53.0
Prupe.8G253900 Prunus persica HOM05D000707 ORTHO05D008008 8.9e-16 88.2 105 51.4
Aqoxy2G03098 Aquilegia oxysepala HOM05D000707 ORTHO05D008008 1.2e-15 87.8 106 51.9
Rhsim13G0016400 Rhododendron simsii HOM05D000707 ORTHO05D008008 1.5e-15 87.4 102 51.0
Manes.01G214400 Manihot esculenta HOM05D000707 ORTHO05D008008 3.4e-15 86.3 110 46.4
VMungo1383G1467 Vigna mungo HOM05D000707 ORTHO05D008008 3.4e-15 86.3 133 43.6
Gohir.A12G008800 Gossypium hirsutum HOM05D000707 ORTHO05D008008 4.4e-15 85.9 100 51.0
Psat3g024360 Pisum sativum HOM05D000707 ORTHO05D008008 4.4e-15 85.9 127 42.5
Solyc09g074560.3 Solanum lycopersicum HOM05D000707 ORTHO05D008008 4.4e-15 85.9 98 51.0
Gohir.D12G008500 Gossypium hirsutum HOM05D000707 ORTHO05D008008 5.8e-15 85.5 100 51.0
Glyma.19G207100 Glycine max HOM05D000707 ORTHO05D008008 7.5e-15 85.1 99 49.5
Hund18077 Selenicereus undatus HOM05D000707 ORTHO05D008008 7.5e-15 85.1 108 52.8
CANSAT25G1163 Cannabis sativa HOM05D000707 ORTHO05D008008 1.3e-14 84.3 101 52.5
Gorai.008G008400 Gossypium raimondii HOM05D000707 ORTHO05D008008 1.3e-14 84.3 100 50.0
EL10Ac7g17393 Beta vulgaris HOM05D000707 ORTHO05D008008 1.7e-14 84.0 105 47.6
COL.COLO4_08017 Corchorus olitorius HOM05D000143 ORTHO05D008008 1.7e-14 84.0 100 50.0
Haze_04831 Corylus avellana HOM05D000707 ORTHO05D008008 1.7e-14 84.0 111 43.2
Actinidia00690 Actinidia chinensis HOM05D000707 ORTHO05D008008 2.2e-14 83.6 100 49.0
AUR62008578 Chenopodium quinoa HOM05D000707 ORTHO05D008008 2.2e-14 83.6 104 48.1
Glyma.03G209800 Glycine max HOM05D000707 ORTHO05D008008 2.2e-14 83.6 101 50.5
Oeu034816.2 Olea europaea HOM05D000707 ORTHO05D008008 2.2e-14 83.6 101 47.5
Sabra14G0100300 Salix brachista HOM05D000707 ORTHO05D008008 2.2e-14 83.6 94 48.9
MSTRG.18186 Avicennia marina HOM05D000707 ORTHO05D008008 2.9e-14 83.2 100 51.0
QL12p024300 Quercus lobata HOM05D000707 ORTHO05D008008 2.9e-14 83.2 102 48.0
Oeu057561.4 Olea europaea HOM05D006618 ORTHO05D008008 3.7e-14 82.8 104 48.1
Potri.014G134601 Populus trichocarpa HOM05D000707 ORTHO05D008008 3.7e-14 82.8 94 48.9
DCAR_002791 Daucus carota HOM05D000707 ORTHO05D008008 8.3e-14 81.6 110 43.6
Duzib133G0475 Durio zibethinus HOM05D000707 ORTHO05D008008 1.1e-13 81.3 100 48.0
Lalb_Chr18g0047431 Lupinus albus HOM05D000707 ORTHO05D008008 1.1e-13 81.3 107 48.6
MD11G1299600 Malus domestica HOM05D000707 ORTHO05D008008 1.1e-13 81.3 111 44.1
Phvul.001G203000 Phaseolus vulgaris HOM05D000707 ORTHO05D008008 1.1e-13 81.3 102 49.0
Thecc.01G292100 Theobroma cacao HOM05D000707 ORTHO05D008008 1.4e-13 80.9 100 49.0
Potri.002G208100 Populus trichocarpa HOM05D000707 ORTHO05D008008 1.9e-13 80.5 92 47.8
THA.LOC104823059 Tarenaya hassleriana HOM05D000707 ORTHO05D008008 1.9e-13 80.5 99 47.5
Sabra02G0149900 Salix brachista HOM05D000707 ORTHO05D008008 2.4e-13 80.1 92 46.7
MD03G1277600 Malus domestica HOM05D000707 ORTHO05D008008 4.1e-13 79.3 106 45.3
Ciclev10020545m.g Citrus clementina HOM05D000707 ORTHO05D008008 5.4e-13 79.0 100 45.0
FAN27G0750 Fragaria x ananassa HOM05D000707 ORTHO05D008008 5.4e-13 79.0 100 47.0
HanXRQChr10g0283841 Helianthus annuus HOM05D000707 ORTHO05D008008 7.1e-13 78.6 101 48.5
RcHm_v2.0_Chr6g0292831 Rosa chinensis HOM05D000707 ORTHO05D008008 9.2e-13 78.2 102 46.1
DCAR_012422 Daucus carota HOM05D000707 ORTHO05D008008 1.2e-12 77.8 112 41.1
FAN20G0483 Fragaria x ananassa HOM05D000707 ORTHO05D008008 1.2e-12 77.8 105 46.7
Aa31LG1G29290 Aethionema arabicum HOM05D000707 ORTHO05D008008 1.6e-12 77.4 122 41.8
Cpa.g.sc9.175 Carica papaya HOM05D000707 ORTHO05D008008 1.6e-12 77.4 129 37.2
FvH4_2g24910 Fragaria vesca HOM05D000707 ORTHO05D008008 2.1e-12 77.0 105 45.7
MBI19_g30846_MAGBIO Magnolia biondii HOM05D000707 ORTHO05D008008 2.7e-12 76.6 102 48.0
Ca_09117_v3 Cicer arietinum L. HOM05D000707 ORTHO05D008008 3.5e-12 76.3 101 49.5
DCAR_018357 Daucus carota HOM05D000707 ORTHO05D008008 3.5e-12 76.3 111 43.2
SGA_v2.0_scaffold1G00417 Striga asiatica HOM05D000707 ORTHO05D008008 1.0e-11 74.7 102 44.1
BcaB02g08724 Brassica carinata HOM05D000707 ORTHO05D008008 1.3e-11 74.3 102 44.1
BcaC02g12537 Brassica carinata HOM05D000707 ORTHO05D008008 3.0e-11 73.2 100 41.0
C04p00040 Brassica napus HOM05D000707 ORTHO05D008008 3.0e-11 73.2 100 41.0
Hma1.2p1_0399F.1_g144130 Hydrangea macrophylla HOM05D000707 ORTHO05D008008 3.0e-11 73.2 100 43.0
Sp4g29800 Schrenkiella parvula HOM05D000707 ORTHO05D008008 3.0e-11 73.2 102 43.1
BolC4t21651H Brassica oleracea HOM05D000707 ORTHO05D008008 3.9e-11 72.8 100 41.0
Hma1.2p1_0209F.1_g089000 Hydrangea macrophylla HOM05D000707 ORTHO05D008008 3.9e-11 72.8 114 44.7
A05p00120 Brassica napus HOM05D000707 ORTHO05D008008 8.6e-11 71.6 100 40.0
BraA05t19008Z Brassica rapa HOM05D000707 ORTHO05D008008 8.6e-11 71.6 100 40.0
Dinv33002 Davidia involucrata HOM05D000707 ORTHO05D008008 1.5e-10 70.9 99 42.4
Migut.D00173 Erythranthe guttata HOM05D000707 ORTHO05D008008 1.5e-10 70.9 104 44.2
MSTRG.21600 Avicennia marina HOM05D000707 ORTHO05D008008 1.9e-10 70.5 103 45.6
unitig_0.g647 Utricularia gibba HOM05D000707 ORTHO05D008008 1.6e-09 67.4 100 45.0
CARHR143280 Cardamine hirsuta HOM05D000707 ORTHO05D008008 3.6e-09 66.2 101 44.6
Gohir.A08G116500 Gossypium hirsutum HOM05D000707 ORTHO05D008008 3.6e-09 66.2 97 40.2
Gohir.D08G137300 Gossypium hirsutum HOM05D000707 ORTHO05D008008 4.7e-09 65.9 97 40.2
Gorai.004G140600 Gossypium raimondii HOM05D000707 ORTHO05D008008 4.7e-09 65.9 97 40.2
Atru.chr5.1261 Acer truncatum HOM05D000707 ORTHO05D008008 4.0e-08 62.8 94 38.3
HPP92_025210 Vanilla planifolia HOM05D000707 ORTHO05D008008 8.9e-08 61.6 172 32.6
unitig_61.g26315 Utricularia gibba HOM05D000406 ORTHO05D008572 1.2e-07 61.2 105 39.0
AT2G47890 Arabidopsis thaliana HOM05D000707 ORTHO05D008008 1.5e-07 60.8 100 40.0
Gorai.005G195800 Gossypium raimondii HOM05D000707 ORTHO05D004608 1.5e-07 60.8 60 53.3
Gohir.A03G151100 Gossypium hirsutum HOM05D000707 ORTHO05D004608 2.6e-07 60.1 60 51.7
AL39U10080 Arabidopsis lyrata HOM05D000707 ORTHO05D008008 5.8e-07 58.9 101 37.6
AL4G47470 Arabidopsis lyrata HOM05D000707 ORTHO05D008008 5.8e-07 58.9 101 37.6
CAN.G16.9 Capsicum annuum HOM05D000707 ORTHO05D004608 9.9e-07 58.2 42 61.9
Gohir.D02G174100 Gossypium hirsutum HOM05D000707 ORTHO05D004608 9.9e-07 58.2 60 51.7
Carub.0004s3060 Capsella rubella HOM05D000707 ORTHO05D008008 2.2e-06 57.0 98 36.7
Thhalv10001548m.g Eutrema salsugineum HOM05D000707 ORTHO05D008008 4.9e-06 55.8 110 38.2
Sc24g0003950 Simmondsia chinensis HOM05D000707 ORTHO05D008008 6.4e-06 55.5 116 36.2


User provided reference genes

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