Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g15765 Nelumbo nucifera HOM05D006328 ORTHO05D007721 9.3e-36 152.9 72 100.0
Nn7g35935 Nelumbo nucifera HOM05D006328 ORTHO05D007721 1.9e-33 145.2 72 94.4
Haze_22985 Corylus avellana HOM05D006328 ORTHO05D007721 9.6e-33 142.9 72 91.7
Sabra03G0161800 Salix brachista HOM05D006328 ORTHO05D007721 9.6e-33 142.9 72 91.7
Potri.003G216700 Populus trichocarpa HOM05D006328 ORTHO05D007721 1.3e-32 142.5 72 91.7
Manes.03G088400 Manihot esculenta HOM05D006328 ORTHO05D007721 1.6e-32 142.1 71 93.0
Eucgr.B03625 Eucalyptus grandis HOM05D006328 ORTHO05D007721 2.1e-32 141.7 71 91.5
MBI13_g29633_MAGBIO Magnolia biondii HOM05D006328 ORTHO05D007721 2.8e-32 141.4 72 90.3
PGR102G1639 Punica granatum HOM05D006328 ORTHO05D007721 3.7e-32 141.0 71 91.5
Ciclev10016391m.g Citrus clementina HOM05D006328 ORTHO05D007721 4.8e-32 140.6 71 93.0
QL01p007982 Quercus lobata HOM05D006328 ORTHO05D007721 4.8e-32 140.6 70 92.9
ATR0598G038 Amborella trichopoda HOM05D006328 ORTHO05D007721 6.2e-32 140.2 71 93.0
TAR633G0950 Trochodendron aralioides HOM05D006328 ORTHO05D007721 6.2e-32 140.2 72 88.9
TAR633G1956 Trochodendron aralioides HOM05D006328 ORTHO05D007721 6.2e-32 140.2 72 88.9
Nitab4.5_0000775g0140 Nicotiana tabacum HOM05D006328 ORTHO05D007721 8.1e-32 139.8 71 90.1
CAN.G158.4 Capsicum annuum HOM05D006328 ORTHO05D007721 1.1e-31 139.4 71 90.1
ClCG03G013990 Citrullus lanatus HOM05D006328 ORTHO05D007721 1.1e-31 139.4 72 87.5
ClCG08G005770 Citrullus lanatus HOM05D006328 ORTHO05D007721 1.1e-31 139.4 72 87.5
MELO3C015648.2 Cucumis melo HOM05D006328 ORTHO05D007721 1.1e-31 139.4 72 87.5
CsaV3_1G042230 Cucumis sativus L. HOM05D006328 ORTHO05D007721 1.1e-31 139.4 72 87.5
HanXRQChr07g0196761 Helianthus annuus HOM05D006328 ORTHO05D007721 1.1e-31 139.4 71 90.1
Sopen01g002030 Solanum pennellii HOM05D006328 ORTHO05D007721 1.1e-31 139.4 71 90.1
PGSC0003DMG400032183 Solanum tuberosum HOM05D006328 ORTHO05D007721 1.1e-31 139.4 71 90.1
Atru.chr3.2259 Acer truncatum HOM05D006328 ORTHO05D007721 1.4e-31 139.0 71 90.1
Atru.chr3.2265 Acer truncatum HOM05D006328 ORTHO05D007721 1.4e-31 139.0 71 90.1
CDE06G2606 Ceratophyllum demersum HOM05D006328 ORTHO05D007721 1.4e-31 139.0 72 88.9
Manes.15G105600 Manihot esculenta HOM05D006328 ORTHO05D007721 1.4e-31 139.0 71 90.1
Sed0015335 Sechium edule HOM05D006328 ORTHO05D007721 1.4e-31 139.0 72 87.5
EL10Ac4g10350 Beta vulgaris HOM05D006328 ORTHO05D007721 1.8e-31 138.7 72 86.1
Cpa.g.sc119.81 Carica papaya HOM05D006328 ORTHO05D007721 1.8e-31 138.7 71 88.7
COL.COLO4_34990 Corchorus olitorius HOM05D001240 ORTHO05D002450 1.8e-31 138.7 71 90.1
DCAR_001992 Daucus carota HOM05D006328 ORTHO05D007721 1.8e-31 138.7 71 88.7
FAN16G1952 Fragaria x ananassa HOM05D006328 ORTHO05D007721 1.8e-31 138.7 72 90.3
FAN25G2838 Fragaria x ananassa HOM05D006328 ORTHO05D007721 1.8e-31 138.7 72 90.3
Nitab4.5_0011368g0030 Nicotiana tabacum HOM05D006328 ORTHO05D007721 1.8e-31 138.7 71 90.1
Aqoxy1G00065 Aquilegia oxysepala HOM05D006328 ORTHO05D007721 2.4e-31 138.3 72 88.9
CiPaw.13G173100 Carya illinoinensis HOM05D006328 ORTHO05D007721 2.4e-31 138.3 71 88.7
Lj1A460T3 Lonicera japonica HOM05D006328 ORTHO05D007721 2.4e-31 138.3 71 90.1
Solyc01g006020.4 Solanum lycopersicum HOM05D006328 ORTHO05D007721 2.4e-31 138.3 71 88.7
Medtr3g083310 Medicago truncatula HOM05D006328 ORTHO05D007721 3.1e-31 137.9 72 86.1
HPP92_009650 Vanilla planifolia HOM05D006328 ORTHO05D007721 3.1e-31 137.9 71 91.5
AUR62000025 Chenopodium quinoa HOM05D006328 ORTHO05D007721 4.0e-31 137.5 72 86.1
FvH4_3g44830 Fragaria vesca HOM05D006328 ORTHO05D007721 4.0e-31 137.5 72 88.9
FAN11G1794 Fragaria x ananassa HOM05D006328 ORTHO05D007721 4.0e-31 137.5 72 88.9
Peaxi162Scf00100g00716 Petunia axillaris HOM05D006328 ORTHO05D007721 4.0e-31 137.5 71 88.7
THA.LOC104811061 Tarenaya hassleriana HOM05D006328 ORTHO05D007721 4.0e-31 137.5 71 88.7
Oeu029372.1 Olea europaea HOM05D006328 ORTHO05D007721 5.3e-31 137.1 71 87.3
RcHm_v2.0_Chr5g0081531 Rosa chinensis HOM05D006328 ORTHO05D007721 5.3e-31 137.1 72 87.5
AUR62019196 Chenopodium quinoa HOM05D006328 ORTHO05D007721 6.9e-31 136.7 72 86.1
ECA238G4721 Erigeron canadensis HOM05D006328 ORTHO05D007721 6.9e-31 136.7 71 87.3
SalBow6G6014 Salvia bowleyana HOM05D006328 ORTHO05D007721 6.9e-31 136.7 71 87.3
Hund07572 Selenicereus undatus HOM05D006328 ORTHO05D007721 6.9e-31 136.7 72 88.9
Thecc.09G213100 Theobroma cacao HOM05D006328 ORTHO05D007721 6.9e-31 136.7 71 88.7
Aa31LG4G12590 Aethionema arabicum HOM05D006328 ORTHO05D007721 9.0e-31 136.3 71 90.1
MSTRG.18860 Avicennia marina HOM05D006328 ORTHO05D007721 9.0e-31 136.3 71 85.9
CANSAT11G2432 Cannabis sativa HOM05D006328 ORTHO05D007721 9.0e-31 136.3 72 84.7
FAN21G0799 Fragaria x ananassa HOM05D006328 ORTHO05D007721 9.0e-31 136.3 72 88.9
Lj6g0000665 Lotus japonicus HOM05D006328 ORTHO05D007721 9.0e-31 136.3 72 86.1
GSVIVG01025405001 Vitis vinifera HOM05D006328 ORTHO05D007721 9.0e-31 136.3 72 84.7
AL5G20530 Arabidopsis lyrata HOM05D006328 ORTHO05D007721 1.2e-30 136.0 71 87.3
CSS0031266 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 1.2e-30 136.0 71 88.7
Carub.0003s3500 Capsella rubella HOM05D006328 ORTHO05D007721 1.2e-30 136.0 71 87.3
Migut.D02532 Erythranthe guttata HOM05D006328 ORTHO05D007721 1.2e-30 136.0 71 85.9
Hma1.2p1_0062F.1_g034170 Hydrangea macrophylla HOM05D006328 ORTHO05D007721 1.2e-30 136.0 70 87.1
Hma1.2p1_0062F.1_g034180 Hydrangea macrophylla HOM05D006328 ORTHO05D007721 1.2e-30 136.0 70 87.1
MD08G1205200 Malus domestica HOM05D006328 ORTHO05D007721 1.2e-30 136.0 72 87.5
TWI60G0846 Tripterygium wilfordii HOM05D006328 ORTHO05D007721 1.2e-30 136.0 71 87.3
Ah.06g193050 Amaranthus hybridus HOM05D001193 ORTHO05D007721 1.5e-30 135.6 72 83.3
Gohir.D13G217500 Gossypium hirsutum HOM05D006328 ORTHO05D007721 1.5e-30 135.6 71 88.7
Gorai.013G248000 Gossypium raimondii HOM05D006328 ORTHO05D007721 1.5e-30 135.6 71 88.7
Lalb_Chr10g0091951 Lupinus albus HOM05D006328 ORTHO05D007721 1.5e-30 135.6 72 86.1
Thhalv10004835m.g Eutrema salsugineum HOM05D006328 ORTHO05D007721 2.0e-30 135.2 71 87.3
Rhsim13G0229700 Rhododendron simsii HOM05D006328 ORTHO05D007721 2.0e-30 135.2 71 87.3
TPR.G19330 Trifolium pratense HOM05D006328 ORTHO05D007721 2.0e-30 135.2 72 84.7
vmacro04215 Vaccinium macrocarpon HOM05D006328 ORTHO05D007721 2.0e-30 135.2 71 87.3
vmacro22566 Vaccinium macrocarpon HOM05D006328 ORTHO05D007721 2.0e-30 135.2 71 87.3
A06p39560 Brassica napus HOM05D006328 ORTHO05D007721 2.6e-30 134.8 71 85.9
BraA06t26871Z Brassica rapa HOM05D006328 ORTHO05D007721 2.6e-30 134.8 71 85.9
CARHR153570 Cardamine hirsuta HOM05D006328 ORTHO05D007721 2.6e-30 134.8 71 87.3
Prupe.1G537200 Prunus persica HOM05D006328 ORTHO05D007721 2.6e-30 134.8 72 86.1
SGA_v2.0_scaffold6G03437 Striga asiatica HOM05D006328 ORTHO05D007721 2.6e-30 134.8 71 85.9
BcaB04g19533 Brassica carinata HOM05D006328 ORTHO05D007721 3.4e-30 134.4 71 87.3
Dinv13426 Davidia involucrata HOM05D006328 ORTHO05D007721 3.4e-30 134.4 71 88.7
Lsat_1_v5_gn_2_101560 Lactuca sativa HOM05D006328 ORTHO05D007721 3.4e-30 134.4 71 84.5
Sp2g18300 Schrenkiella parvula HOM05D006328 ORTHO05D007721 3.4e-30 134.4 71 87.3
arahy.Tifrunner.gnm1.ann1.6HD85A Arachis hypogaea HOM05D006328 ORTHO05D007721 4.5e-30 134.0 72 84.7
BcaC04g23807 Brassica carinata HOM05D006328 ORTHO05D007721 4.5e-30 134.0 71 87.3
A09p04230 Brassica napus HOM05D006328 ORTHO05D007721 4.5e-30 134.0 71 87.3
C09p04470 Brassica napus HOM05D006328 ORTHO05D007721 4.5e-30 134.0 71 87.3
BolC9t53377H Brassica oleracea HOM05D006328 ORTHO05D007721 4.5e-30 134.0 71 87.3
BraA09t36060Z Brassica rapa HOM05D006328 ORTHO05D007721 4.5e-30 134.0 71 87.3
Actinidia16265 Actinidia chinensis HOM05D006328 ORTHO05D007721 5.8e-30 133.7 71 85.9
Duzib150G1371 Durio zibethinus HOM05D006328 ORTHO05D007721 5.8e-30 133.7 71 87.3
Glyma.08G315600 Glycine max HOM05D006328 ORTHO05D007721 5.8e-30 133.7 72 81.9
Glyma.18G097300 Glycine max HOM05D006328 ORTHO05D007721 5.8e-30 133.7 72 81.9
Gohir.A13G213700 Gossypium hirsutum HOM05D006328 ORTHO05D007721 7.6e-30 133.3 71 87.3
PSO339G5084 Papaver somniferum HOM05D006328 ORTHO05D007721 7.6e-30 133.3 72 84.7
AT3G32930 Arabidopsis thaliana HOM05D006328 ORTHO05D007721 1.0e-29 132.9 71 85.9
C07p38710 Brassica napus HOM05D006328 ORTHO05D007721 1.3e-29 132.5 71 84.5
Phvul.006G042800 Phaseolus vulgaris HOM05D006328 ORTHO05D007721 1.3e-29 132.5 72 80.6
VMungo0540G0449 Vigna mungo HOM05D006328 ORTHO05D007721 2.2e-29 131.7 72 80.6
Cc01_g01550 Coffea canephora HOM05D006328 ORTHO05D007721 2.9e-29 131.3 69 87.0
PSO384G1580 Papaver somniferum HOM05D006328 ORTHO05D007721 4.9e-29 130.6 72 83.3
unitig_746.g26630 Utricularia gibba HOM05D006328 ORTHO05D007721 8.4e-29 129.8 72 84.7
Os07g0608100 Oryza sativa ssp. japonica HOM05D006328 ORTHO05D007721 6.0e-27 123.6 72 79.2
AagrBONN_evm.TU.Sc2ySwM_344.1649 Anthoceros agrestis HOM05D006328 ORTHO05D007721 1.9e-25 118.6 71 76.1
Zm00001eb108920 Zea mays HOM05D006328 ORTHO05D007721 7.4e-25 116.7 72 73.6
HanXRQChr04g0113321 Helianthus annuus HOM05D006328 ORTHO05D007721 1.6e-24 115.5 61 85.2
Mapoly0048s0070 Marchantia polymorpha HOM05D006328 ORTHO05D007721 2.8e-24 114.8 71 71.8
CDE07G1106 Ceratophyllum demersum HOM05D006328 ORTHO05D007721 4.8e-24 114.0 62 82.3
Actinidia06854 Actinidia chinensis HOM05D001240 ORTHO05D002450 9.0e-23 109.8 57 86.0
Pp3c11_23310 Physcomitrium patens HOM05D006328 ORTHO05D007721 2.0e-22 108.6 68 73.5
CBR_g50072 Chara braunii HOM05D006328 ORTHO05D007721 1.0e-21 106.3 71 64.8
Duzib168G1709 Durio zibethinus HOM05D006328 ORTHO05D007721 1.0e-18 96.3 55 80.0
unitig_899.g15354 Utricularia gibba HOM05D006328 ORTHO05D007721 1.4e-15 85.9 50 76.0
CSS0049555 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 4.6e-11 70.9 45 73.3
CSS0028438 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 1.1e-09 66.2 44 72.7
Psat5g101200 Pisum sativum HOM05D006328 ORTHO05D007721 9.7e-09 63.2 29 93.1


User provided reference genes

Program Settings