Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g15719 Nelumbo nucifera HOM05D003463 ORTHO05D004206 9.2e-80 300.1 141 100.0
Nn1g06924 Nelumbo nucifera HOM05D003463 ORTHO05D004206 3.1e-51 205.3 96 95.8
Nn7g36849 Nelumbo nucifera HOM05D003463 ORTHO05D004206 4.9e-49 198.0 96 93.8
Nn1g03744 Nelumbo nucifera HOM05D003463 ORTHO05D004206 6.7e-46 187.6 96 89.6
Dinv10901 Davidia involucrata HOM05D003463 ORTHO05D004206 6.2e-44 181.0 108 77.8
TAR629G1280 Trochodendron aralioides HOM05D003463 ORTHO05D004206 1.1e-43 180.3 108 76.9
GSVIVG01030649001 Vitis vinifera HOM05D003463 ORTHO05D004206 4.0e-43 178.3 93 86.0
Dinv18548 Davidia involucrata HOM05D003463 ORTHO05D004206 6.9e-43 177.6 108 76.9
TAR627G0487 Trochodendron aralioides HOM05D003463 ORTHO05D004206 9.0e-43 177.2 93 86.0
Hma1.2p1_1378F.1_g279185 Hydrangea macrophylla HOM05D003463 ORTHO05D004206 4.5e-42 174.9 109 75.2
Prupe.3G222600 Prunus persica HOM05D003463 ORTHO05D004206 4.5e-42 174.9 108 75.9
CANSAT64G0087 Cannabis sativa HOM05D003463 ORTHO05D004206 1.3e-41 173.3 108 74.1
Cfa014461 Carpinus fangiana HOM05D003463 ORTHO05D004206 2.2e-41 172.6 93 81.7
Haze_12964 Corylus avellana HOM05D003463 ORTHO05D004206 3.8e-41 171.8 93 81.7
Cpa.g.sc8.254 Carica papaya HOM05D003463 ORTHO05D004206 4.9e-41 171.4 110 70.9
MD09G1103200 Malus domestica HOM05D003463 ORTHO05D004206 4.9e-41 171.4 108 74.1
vmacro12241 Vaccinium macrocarpon HOM05D003463 ORTHO05D004206 6.5e-41 171.0 108 75.0
Actinidia12489 Actinidia chinensis HOM05D003463 ORTHO05D004206 1.4e-40 169.9 111 73.0
CiPaw.03G164300 Carya illinoinensis HOM05D003463 ORTHO05D004206 1.9e-40 169.5 93 81.7
Cc05_g05330 Coffea canephora HOM05D003463 ORTHO05D004206 1.9e-40 169.5 108 75.0
CiPaw.04G119100 Carya illinoinensis HOM05D003463 ORTHO05D004206 4.2e-40 168.3 93 81.7
MD17G1091000 Malus domestica HOM05D003463 ORTHO05D004206 5.5e-40 167.9 108 72.2
Oeu035823.1 Olea europaea HOM05D003463 ORTHO05D004206 7.1e-40 167.5 108 72.2
QL08p034245 Quercus lobata HOM05D003463 ORTHO05D004206 1.2e-39 166.8 96 77.1
CDE05G3394 Ceratophyllum demersum HOM05D003463 ORTHO05D004206 2.1e-39 166.0 101 72.3
Glyma.12G102400 Glycine max HOM05D003463 ORTHO05D004206 3.5e-39 165.2 93 78.5
Glyma.06G301900 Glycine max HOM05D003463 ORTHO05D004206 4.6e-39 164.9 93 77.4
Nitab4.5_0001134g0130 Nicotiana tabacum HOM05D003463 ORTHO05D004206 4.6e-39 164.9 108 74.1
CsaV3_7G003880 Cucumis sativus L. HOM05D003463 ORTHO05D004206 6.0e-39 164.5 108 70.4
Rhsim06G0155700 Rhododendron simsii HOM05D003463 ORTHO05D004206 7.9e-39 164.1 93 80.6
CDE11G1115 Ceratophyllum demersum HOM05D003463 ORTHO05D004206 1.0e-38 163.7 108 68.5
Nn5g27117 Nelumbo nucifera HOM05D003463 ORTHO05D004206 1.8e-38 162.9 93 86.0
Nn5g27119 Nelumbo nucifera HOM05D003463 ORTHO05D004206 1.8e-38 162.9 93 86.0
Nitab4.5_0003429g0030 Nicotiana tabacum HOM05D003463 ORTHO05D004206 1.8e-38 162.9 108 73.1
Peaxi162Scf00007g01417 Petunia axillaris HOM05D003463 ORTHO05D004206 3.0e-38 162.2 108 72.2
ClCG02G001610 Citrullus lanatus HOM05D003463 ORTHO05D004206 5.1e-38 161.4 108 69.4
CSS0019318 Camellia sinensis var. sinensis HOM05D003463 ORTHO05D004206 6.7e-38 161.0 108 70.4
RcHm_v2.0_Chr2g0160501 Rosa chinensis HOM05D003463 ORTHO05D004206 8.7e-38 160.6 108 66.7
MELO3C018791.2 Cucumis melo HOM05D003463 ORTHO05D004206 1.1e-37 160.2 108 69.4
FvH4_6g43760 Fragaria vesca HOM05D003463 ORTHO05D004206 1.1e-37 160.2 109 65.1
FAN02G4525 Fragaria x ananassa HOM05D003463 ORTHO05D004206 1.1e-37 160.2 109 65.1
FAN05G2372 Fragaria x ananassa HOM05D003463 ORTHO05D004206 1.1e-37 160.2 109 65.1
FAN09G4547 Fragaria x ananassa HOM05D003463 ORTHO05D004206 1.1e-37 160.2 109 65.1
FAN14G1979 Fragaria x ananassa HOM05D003463 ORTHO05D004206 1.1e-37 160.2 109 65.1
Solyc07g052940.4 Solanum lycopersicum HOM05D003463 ORTHO05D004206 1.1e-37 160.2 108 71.3
Sopen07g026490 Solanum pennellii HOM05D003463 ORTHO05D004206 1.1e-37 160.2 108 71.3
SalBow7G2865 Salvia bowleyana HOM05D003463 ORTHO05D004206 1.5e-37 159.8 108 69.4
EL10Ac9g22340 Beta vulgaris HOM05D003463 ORTHO05D004206 1.9e-37 159.5 93 82.8
CAN.G86.25 Capsicum annuum HOM05D003463 ORTHO05D004206 2.5e-37 159.1 108 70.4
Glyma.12G196800 Glycine max HOM05D003463 ORTHO05D004206 2.5e-37 159.1 93 77.4
Glyma.13G305000 Glycine max HOM05D003463 ORTHO05D004206 2.5e-37 159.1 93 78.5
CSS0001270 Camellia sinensis var. sinensis HOM05D003463 ORTHO05D004206 3.3e-37 158.7 108 73.1
CSS0039700 Camellia sinensis var. sinensis HOM05D003463 ORTHO05D004206 3.3e-37 158.7 108 73.1
CSS0043747 Camellia sinensis var. sinensis HOM05D003463 ORTHO05D004206 3.3e-37 158.7 109 73.4
DCAR_009696 Daucus carota HOM05D003463 ORTHO05D004206 3.3e-37 158.7 93 76.3
Sed0025509 Sechium edule HOM05D003463 ORTHO05D004206 3.3e-37 158.7 108 68.5
Aqoxy4G01913 Aquilegia oxysepala HOM05D003463 ORTHO05D004206 4.3e-37 158.3 92 78.3
DCAR_021199 Daucus carota HOM05D003463 ORTHO05D004206 4.3e-37 158.3 98 74.5
Lalb_Chr19g0135651 Lupinus albus HOM05D003463 ORTHO05D004206 4.3e-37 158.3 93 75.3
Phvul.005G112000 Phaseolus vulgaris HOM05D003463 ORTHO05D004206 5.7e-37 157.9 93 77.4
Manes.13G074400 Manihot esculenta HOM05D003463 ORTHO05D004206 7.4e-37 157.5 99 71.7
Psat0s3330g0040 Pisum sativum HOM05D003463 ORTHO05D004206 7.4e-37 157.5 96 75.0
CSS0047242 Camellia sinensis var. sinensis HOM05D003463 ORTHO05D004206 9.6e-37 157.1 94 80.9
Sed0018482 Sechium edule HOM05D003463 ORTHO05D004206 9.6e-37 157.1 98 72.4
Lalb_Chr14g0375591 Lupinus albus HOM05D003463 ORTHO05D004206 1.3e-36 156.8 93 76.3
Thecc.02G164300 Theobroma cacao HOM05D003463 ORTHO05D004206 1.6e-36 156.4 108 68.5
Ciclev10014009m.g Citrus clementina HOM05D003463 ORTHO05D004206 2.1e-36 156.0 108 68.5
COL.COLO4_13026 Corchorus olitorius HOM05D003463 ORTHO05D004206 2.1e-36 156.0 98 73.5
VMungo1080G1634 Vigna mungo HOM05D003463 ORTHO05D004206 2.1e-36 156.0 93 76.3
Ca_20672_v3 Cicer arietinum L. HOM05D003463 ORTHO05D004206 2.8e-36 155.6 93 72.0
Medtr4g045743 Medicago truncatula HOM05D003463 ORTHO05D004206 2.8e-36 155.6 93 73.1
Psat7g193080 Pisum sativum HOM05D003463 ORTHO05D004206 2.8e-36 155.6 93 73.1
Ah.01g005040 Amaranthus hybridus HOM05D003463 ORTHO05D004206 3.7e-36 155.2 109 70.6
Aa31LG8G8660 Aethionema arabicum HOM05D003463 ORTHO05D004206 6.3e-36 154.5 104 66.3
Sc21g0001820 Simmondsia chinensis HOM05D003463 ORTHO05D004206 6.3e-36 154.5 93 77.4
Ca_01564_v3 Cicer arietinum L. HOM05D003463 ORTHO05D004206 8.2e-36 154.1 93 76.3
Oeu011067.1 Olea europaea HOM05D003463 ORTHO05D004206 1.8e-35 152.9 108 66.7
PGR042G2093 Punica granatum HOM05D003463 ORTHO05D004206 1.8e-35 152.9 93 73.1
Hund08062 Selenicereus undatus HOM05D003463 ORTHO05D004206 1.8e-35 152.9 93 77.4
Migut.M00384 Erythranthe guttata HOM05D003463 ORTHO05D004206 2.4e-35 152.5 108 66.7
Medtr2g089080 Medicago truncatula HOM05D003463 ORTHO05D004206 5.3e-35 151.4 93 75.3
ATR0804G005 Amborella trichopoda HOM05D003463 ORTHO05D004206 6.9e-35 151.0 98 72.4
SGA_v2.0_scaffold34G13880 Striga asiatica HOM05D003463 ORTHO05D004206 6.9e-35 151.0 108 64.8
Atru.chr6.3118 Acer truncatum HOM05D003463 ORTHO05D004206 9.0e-35 150.6 111 64.0
Gohir.A03G162950 Gossypium hirsutum HOM05D003463 ORTHO05D004206 2.0e-34 149.4 108 65.7
Gorai.005G208600 Gossypium raimondii HOM05D003463 ORTHO05D004206 2.0e-34 149.4 108 65.7
TPR.G19054 Trifolium pratense HOM05D003463 ORTHO05D004206 2.0e-34 149.4 93 69.9
Duzib052G0139 Durio zibethinus HOM05D003463 ORTHO05D004206 3.4e-34 148.7 108 64.8
Lj3g0003812 Lotus japonicus HOM05D003463 ORTHO05D004206 4.5e-34 148.3 93 72.0
Lj3g0021154 Lotus japonicus HOM05D003463 ORTHO05D004206 4.5e-34 148.3 93 72.0
TPR.G30794 Trifolium pratense HOM05D003463 ORTHO05D004206 4.5e-34 148.3 93 73.1
Duzib248G0717 Durio zibethinus HOM05D003463 ORTHO05D004206 5.9e-34 147.9 108 66.7
TWI36G1584 Tripterygium wilfordii HOM05D003463 ORTHO05D004206 7.6e-34 147.5 108 63.9
Actinidia27017 Actinidia chinensis HOM05D003463 ORTHO05D004206 1.3e-33 146.7 95 73.7
Eucgr.A01739 Eucalyptus grandis HOM05D003463 ORTHO05D004206 1.7e-33 146.4 95 71.6
Gohir.D02G186400 Gossypium hirsutum HOM05D003463 ORTHO05D004206 1.7e-33 146.4 108 64.8
TWI18G0507 Tripterygium wilfordii HOM05D003463 ORTHO05D004206 6.5e-33 144.4 108 63.9
PSO675G4322 Papaver somniferum HOM05D003463 ORTHO05D004206 8.5e-33 144.1 92 70.7
PSO541G5151 Papaver somniferum HOM05D003463 ORTHO05D004206 1.1e-32 143.7 92 70.7
Lsat_1_v5_gn_8_129901 Lactuca sativa HOM05D003463 ORTHO05D004206 1.4e-32 143.3 93 72.0
Os08g0180100 Oryza sativa ssp. japonica HOM05D003463 ORTHO05D004206 3.2e-32 142.1 93 71.0
Thhalv10024183m.g Eutrema salsugineum HOM05D003463 ORTHO05D004206 4.2e-32 141.7 93 68.8
Sp7g13400 Schrenkiella parvula HOM05D003463 ORTHO05D004206 4.2e-32 141.7 93 69.9
CARHR221910 Cardamine hirsuta HOM05D003463 ORTHO05D004206 5.5e-32 141.4 93 68.8
Sabra17G0027900 Salix brachista HOM05D003463 ORTHO05D004206 5.5e-32 141.4 99 64.6
AL7G40500 Arabidopsis lyrata HOM05D003463 ORTHO05D004206 7.2e-32 141.0 93 68.8
AT4G15180 Arabidopsis thaliana HOM05D003463 ORTHO05D004206 7.2e-32 141.0 93 68.8
Zm00001eb171790 Zea mays HOM05D003463 ORTHO05D004206 7.2e-32 141.0 108 63.0
HanXRQChr17g0563751 Helianthus annuus HOM05D003463 ORTHO05D004206 1.2e-31 140.2 93 67.7
THA.LOC104808502 Tarenaya hassleriana HOM05D003463 ORTHO05D004206 2.7e-31 139.0 100 60.0
BcaB02g07835 Brassica carinata HOM05D003463 ORTHO05D004206 3.6e-31 138.7 104 60.6
BcaC08g44245 Brassica carinata HOM05D003463 ORTHO05D004206 3.6e-31 138.7 104 60.6
C06p16490 Brassica napus HOM05D003463 ORTHO05D004206 3.6e-31 138.7 104 60.6
BolC6t36852H Brassica oleracea HOM05D003463 ORTHO05D004206 3.6e-31 138.7 104 60.6
ECA233G2663 Erigeron canadensis HOM05D003463 ORTHO05D004206 3.6e-31 138.7 93 68.8
Eucgr.E02490 Eucalyptus grandis HOM05D003463 ORTHO05D004206 3.6e-31 138.7 96 67.7
Zm00001eb413080 Zea mays HOM05D003463 ORTHO05D004206 4.6e-31 138.3 108 61.1
BcaNung00300 Brassica carinata HOM05D003463 ORTHO05D004206 6.1e-31 137.9 93 66.7
Lj1C753T3 Lonicera japonica HOM05D003463 ORTHO05D004206 1.0e-30 137.1 89 67.4
Potri.017G041100 Populus trichocarpa HOM05D003463 ORTHO05D004206 1.0e-30 137.1 98 63.3
A01p22340 Brassica napus HOM05D003463 ORTHO05D004206 1.3e-30 136.7 93 66.7
A05p17060 Brassica napus HOM05D003463 ORTHO05D004206 1.3e-30 136.7 104 59.6
BraA01t02149Z Brassica rapa HOM05D003463 ORTHO05D004206 1.3e-30 136.7 93 66.7
BraA05t20607Z Brassica rapa HOM05D003463 ORTHO05D004206 1.3e-30 136.7 104 59.6
BcaC09g50202 Brassica carinata HOM05D003463 ORTHO05D004206 1.8e-30 136.3 93 66.7
CSS0016126 Camellia sinensis var. sinensis HOM05D003463 ORTHO05D004206 3.9e-30 135.2 94 73.4
SHI10282 Sapria himalayana HOM05D003463 ORTHO05D004206 6.7e-30 134.4 111 58.6
C01p27890 Brassica napus HOM05D003463 ORTHO05D004206 1.9e-29 132.9 93 64.5
BolC1t02722H Brassica oleracea HOM05D003463 ORTHO05D004206 1.9e-29 132.9 93 64.5
Potri.007G119300 Populus trichocarpa HOM05D003463 ORTHO05D004206 9.7e-29 130.6 99 59.6
SEGI_02831 Sequoiadendron giganteum HOM05D003463 ORTHO05D004206 3.2e-24 115.5 81 61.7
HanXRQChr11g0343651 Helianthus annuus HOM05D001440 ORTHO05D001119 1.0e-22 110.5 102 53.9
Hma1.2p1_2477F.1_g322850 Hydrangea macrophylla HOM05D003463 ORTHO05D004206 3.8e-17 92.0 109 49.5
Pp3c11_18840 Physcomitrium patens HOM05D003463 ORTHO05D004206 2.0e-13 79.7 78 50.0
Pp3c7_5920 Physcomitrium patens HOM05D003463 ORTHO05D004206 5.7e-13 78.2 78 48.7
Pp3c7_5929 Physcomitrium patens HOM05D003463 ORTHO05D004206 5.7e-13 78.2 78 48.7
Mapoly0021s0105 Marchantia polymorpha HOM05D003463 ORTHO05D004206 1.7e-12 76.6 93 44.1
AagrBONN_evm.TU.Sc2ySwM_117.2770 Anthoceros agrestis HOM05D003463 ORTHO05D004206 2.0e-10 69.7 92 42.4
CBR_g54148 Chara braunii HOM05D003463 ORTHO05D004206 1.7e-09 66.6 104 38.5


User provided reference genes

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