Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g15502 Nelumbo nucifera HOM05D006647 ORTHO05D008232 3.4e-172 608.2 303 100.0
TAR633G0758 Trochodendron aralioides HOM05D006647 ORTHO05D008232 1.1e-114 417.2 263 78.3
Dinv09377 Davidia involucrata HOM05D006647 ORTHO05D008232 3.5e-108 395.6 263 77.2
GSVIVG01032057001 Vitis vinifera HOM05D006647 ORTHO05D008232 1.9e-106 389.8 263 74.5
Haze_03236 Corylus avellana HOM05D006647 ORTHO05D008232 2.7e-105 386.0 264 75.4
Cfa010738 Carpinus fangiana HOM05D006647 ORTHO05D008232 8.0e-105 384.4 266 74.4
Manes.07G004100 Manihot esculenta HOM05D006647 ORTHO05D008232 1.5e-103 380.2 266 72.9
Atru.chr11.2639 Acer truncatum HOM05D006647 ORTHO05D008232 2.2e-102 376.3 268 72.8
PSO339G5555 Papaver somniferum HOM05D006647 ORTHO05D008232 5.4e-101 371.7 262 70.6
CiPaw.13G002900 Carya illinoinensis HOM05D006647 ORTHO05D008232 7.0e-101 371.3 272 72.4
THA.LOC104801981 Tarenaya hassleriana HOM05D006647 ORTHO05D008232 9.1e-101 370.9 261 72.4
TWI73G0313 Tripterygium wilfordii HOM05D006647 ORTHO05D008232 2.7e-100 369.4 270 71.1
Nitab4.5_0011905g0020 Nicotiana tabacum HOM05D006647 ORTHO05D008232 6.5e-99 364.8 264 70.1
PSO384G2587 Papaver somniferum HOM05D006647 ORTHO05D008232 6.5e-99 364.8 264 70.1
Potri.009G064500 Populus trichocarpa HOM05D006647 ORTHO05D008232 8.6e-99 364.4 267 72.3
Actinidia20680 Actinidia chinensis HOM05D006647 ORTHO05D008232 1.1e-98 364.0 267 71.2
Nitab4.5_0001542g0050 Nicotiana tabacum HOM05D006647 ORTHO05D008232 1.1e-98 364.0 264 70.1
Solyc01g086900.4 Solanum lycopersicum HOM05D006647 ORTHO05D008232 1.1e-98 364.0 264 70.1
Sopen01g033910 Solanum pennellii HOM05D006647 ORTHO05D008232 1.9e-98 363.2 264 70.1
Ciclev10032303m.g Citrus clementina HOM05D006647 ORTHO05D008232 2.5e-98 362.8 285 67.0
RcHm_v2.0_Chr1g0314911 Rosa chinensis HOM05D006647 ORTHO05D008232 5.5e-98 361.7 268 70.5
Lj5g0023478 Lotus japonicus HOM05D006647 ORTHO05D008232 9.5e-98 360.9 270 67.4
Lalb_Chr25g0283211 Lupinus albus HOM05D006647 ORTHO05D008232 1.6e-97 360.1 271 66.8
Sabra09G0047700 Salix brachista HOM05D006647 ORTHO05D008232 2.1e-97 359.8 266 71.1
FAN03G0714 Fragaria x ananassa HOM05D006647 ORTHO05D008232 3.6e-97 359.0 265 69.4
arahy.Tifrunner.gnm1.ann1.BH4E67 Arachis hypogaea HOM05D006647 ORTHO05D008232 6.1e-97 358.2 266 68.8
arahy.Tifrunner.gnm1.ann1.K7GJAS Arachis hypogaea HOM05D006647 ORTHO05D008232 1.0e-96 357.5 266 68.8
FvH4_7g00690 Fragaria vesca HOM05D006647 ORTHO05D008232 1.8e-96 356.7 265 69.1
Peaxi162Scf00428g00819 Petunia axillaris HOM05D006647 ORTHO05D008232 2.3e-96 356.3 266 69.9
TPR.G12287 Trifolium pratense HOM05D006647 ORTHO05D008232 2.3e-96 356.3 269 67.7
Hma1.2p1_0929F.1_g237940 Hydrangea macrophylla HOM05D006647 ORTHO05D008232 6.8e-96 354.8 207 83.1
Lj9A629T102 Lonicera japonica HOM05D006647 ORTHO05D008232 8.8e-96 354.4 207 82.6
Thecc.01G413900 Theobroma cacao HOM05D006647 ORTHO05D008232 8.8e-96 354.4 270 65.9
Prupe.2G009700 Prunus persica HOM05D006647 ORTHO05D008232 2.0e-95 353.2 276 67.4
Phvul.005G036700 Phaseolus vulgaris HOM05D006647 ORTHO05D008232 3.4e-95 352.4 269 69.1
VMungo1080G0119 Vigna mungo HOM05D006647 ORTHO05D008232 2.2e-94 349.7 270 69.3
CSS0029691 Camellia sinensis var. sinensis HOM05D006647 ORTHO05D008232 1.1e-93 347.4 274 68.6
Glyma.08G152700 Glycine max HOM05D006647 ORTHO05D008232 1.1e-93 347.4 268 68.7
MD07G1006600 Malus domestica HOM05D006647 ORTHO05D008232 1.1e-93 347.4 253 71.1
MSTRG.5006 Avicennia marina HOM05D006647 ORTHO05D008232 9.2e-93 344.4 272 68.4
CsaV3_7G031240 Cucumis sativus L. HOM05D006647 ORTHO05D008232 1.6e-92 343.6 269 67.3
QL04p005221 Quercus lobata HOM05D006647 ORTHO05D008232 1.6e-92 343.6 279 65.2
Carub.0005s3017 Capsella rubella HOM05D006647 ORTHO05D008232 2.0e-92 343.2 265 64.5
FAN06G3601 Fragaria x ananassa HOM05D006647 ORTHO05D008232 2.7e-92 342.8 201 81.1
FAN10G4164 Fragaria x ananassa HOM05D006647 ORTHO05D008232 2.7e-92 342.8 201 81.1
Medtr3g027870 Medicago truncatula HOM05D006647 ORTHO05D008232 5.9e-92 341.7 270 66.3
AL5G46420 Arabidopsis lyrata HOM05D006647 ORTHO05D008232 7.8e-92 341.3 265 65.7
Sc11g0009300 Simmondsia chinensis HOM05D006647 ORTHO05D008232 7.8e-92 341.3 277 65.7
DCAR_006301 Daucus carota HOM05D006647 ORTHO05D008232 1.0e-91 340.9 232 72.8
CARHR291410 Cardamine hirsuta HOM05D006647 ORTHO05D008232 1.3e-91 340.5 265 67.5
Sp1g00030 Schrenkiella parvula HOM05D006647 ORTHO05D008232 3.8e-91 339.0 270 64.8
Sp5g00020 Schrenkiella parvula HOM05D006647 ORTHO05D008232 3.8e-91 339.0 270 64.8
Psat5g204920 Pisum sativum HOM05D006647 ORTHO05D008232 8.6e-91 337.8 258 66.3
Sed0007518 Sechium edule HOM05D006647 ORTHO05D008232 1.2e-89 334.0 266 66.9
Eucgr.G03394 Eucalyptus grandis HOM05D006647 ORTHO05D008232 3.6e-89 332.4 271 66.1
BcaC01g03971 Brassica carinata HOM05D006647 ORTHO05D008232 4.7e-89 332.0 267 65.2
HanXRQChr01g0017301 Helianthus annuus HOM05D006647 ORTHO05D008232 8.0e-89 331.3 260 66.5
AT5G26880 Arabidopsis thaliana HOM05D006647 ORTHO05D008232 3.0e-88 329.3 207 75.4
C03p46630 Brassica napus HOM05D006647 ORTHO05D008232 1.2e-87 327.4 249 67.1
Thhalv10006150m.g Eutrema salsugineum HOM05D006647 ORTHO05D008232 1.5e-87 327.0 227 70.5
BraA03t12997Z Brassica rapa HOM05D006647 ORTHO05D008232 2.0e-87 326.6 259 66.0
Duzib138G0958 Durio zibethinus HOM05D006647 ORTHO05D008232 2.0e-87 326.6 267 65.5
HPP92_015763 Vanilla planifolia HOM05D006647 ORTHO05D008232 5.7e-87 325.1 263 65.0
A03p38460 Brassica napus HOM05D006647 ORTHO05D008232 9.8e-87 324.3 249 67.1
BolC3t16926H Brassica oleracea HOM05D006647 ORTHO05D008232 1.7e-86 323.6 249 67.1
CANSAT01G0516 Cannabis sativa HOM05D006647 ORTHO05D008232 1.7e-86 323.6 228 70.6
AUR62009372 Chenopodium quinoa HOM05D006647 ORTHO05D008232 8.3e-86 321.2 202 76.7
ATR0605G070 Amborella trichopoda HOM05D006647 ORTHO05D008232 9.2e-85 317.8 204 73.0
Gorai.004G174000 Gossypium raimondii HOM05D006647 ORTHO05D008232 1.2e-84 317.4 220 71.8
COL.COLO4_23898 Corchorus olitorius HOM05D006647 ORTHO05D008232 1.6e-84 317.0 202 77.2
Gohir.D08G166600 Gossypium hirsutum HOM05D006647 ORTHO05D008232 1.6e-84 317.0 217 71.4
Gohir.A08G145600 Gossypium hirsutum HOM05D006647 ORTHO05D008232 3.5e-84 315.8 187 80.7
MBI01_g36432_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 1.1e-82 310.8 251 64.5
Rhsim01G0130800 Rhododendron simsii HOM05D006647 ORTHO05D008232 5.6e-82 308.5 342 53.2
Migut.N01481 Erythranthe guttata HOM05D006647 ORTHO05D008232 1.6e-81 307.0 240 65.8
ClCG09G004320 Citrullus lanatus HOM05D006647 ORTHO05D008232 3.6e-81 305.8 269 61.7
Hund20080 Selenicereus undatus HOM05D006647 ORTHO05D008232 8.0e-81 304.7 218 72.9
MSTRG.5008 Avicennia marina HOM05D006647 ORTHO05D008232 1.4e-80 303.9 215 70.2
Cc02_g28430 Coffea canephora HOM05D006647 ORTHO05D008232 5.2e-80 302.0 175 81.7
EL10Ac2g04310 Beta vulgaris HOM05D006647 ORTHO05D008232 1.5e-79 300.4 266 61.3
Migut.O00562 Erythranthe guttata HOM05D006647 ORTHO05D008232 1.7e-78 297.0 176 80.7
SalBow4G2297 Salvia bowleyana HOM05D006647 ORTHO05D008232 5.0e-75 285.4 174 79.3
unitig_0.g1579 Utricularia gibba HOM05D006647 ORTHO05D008232 9.5e-74 281.2 240 62.5
Lsat_1_v5_gn_1_109441 Lactuca sativa HOM05D006647 ORTHO05D008232 1.6e-73 280.4 209 68.9
SGA_v2.0_scaffold4G02252 Striga asiatica HOM05D006647 ORTHO05D008232 2.6e-71 273.1 272 58.8
MBI04_g14259_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 8.3e-70 268.1 259 59.1
CDE06G2349 Ceratophyllum demersum HOM05D006647 ORTHO05D008232 7.1e-69 265.0 170 73.5
A03p38500 Brassica napus HOM05D006647 ORTHO05D008232 3.6e-65 252.7 203 65.0
Mapoly0078s0003 Marchantia polymorpha HOM05D006647 ORTHO05D008232 2.4e-64 250.0 211 58.3
AUR62023053 Chenopodium quinoa HOM05D006647 ORTHO05D008232 1.2e-63 247.7 227 58.1
vmacro21178 Vaccinium macrocarpon HOM05D006647 ORTHO05D008232 1.2e-60 237.7 237 57.4
ECA248G3327 Erigeron canadensis HOM05D006647 ORTHO05D008232 1.6e-60 237.3 249 52.2
Pp3c8_11960 Physcomitrium patens HOM05D006647 ORTHO05D008232 4.6e-60 235.7 196 58.7
AagrBONN_evm.TU.Sc2ySwM_362.154 Anthoceros agrestis HOM05D006647 ORTHO05D008232 1.6e-57 227.3 159 66.7
SMO351G0607 Selaginella moellendorffii HOM05D006647 ORTHO05D008232 2.4e-56 223.4 157 66.9
Pp3c23_8130 Physcomitrium patens HOM05D006647 ORTHO05D008232 3.4e-55 219.5 161 64.0
CBR_g41537 Chara braunii HOM05D006647 ORTHO05D008232 4.2e-53 212.6 157 65.0
MELO3C023534.2 Cucumis melo HOM05D006647 ORTHO05D008232 2.1e-52 210.3 134 73.1
FAN01G0876 Fragaria x ananassa HOM05D006647 ORTHO05D008232 2.5e-50 203.4 185 60.0
Os08g0506500 Oryza sativa ssp. japonica HOM05D006647 ORTHO05D008232 4.3e-50 202.6 199 57.8
FAN01G1843 Fragaria x ananassa HOM05D006647 ORTHO05D008232 5.3e-48 195.7 157 63.7
PGSC0003DMG400006881 Solanum tuberosum HOM05D006647 ORTHO05D008232 9.0e-48 194.9 113 81.4
QL04p005246 Quercus lobata HOM05D000030 ORTHO05D008232 3.8e-46 189.5 161 62.7
PGR031G3323 Punica granatum HOM05D006647 ORTHO05D008232 1.9e-45 187.2 167 60.5
Cpa.g.sc234.12 Carica papaya HOM05D006647 ORTHO05D008232 7.1e-45 185.3 110 81.8
Oeu010354.1 Olea europaea HOM05D006647 ORTHO05D008232 9.3e-45 184.9 111 80.2
MCO06G107 Micromonas commoda HOM05D006647 ORTHO05D008232 1.1e-40 171.4 159 56.6
Cre10.g417650 Chlamydomonas reinhardtii HOM05D006647 ORTHO05D008232 4.0e-40 169.5 174 49.4
Zm00001eb034920 Zea mays HOM05D006647 ORTHO05D008232 1.1e-37 161.4 135 62.2
Cc00_g30670 Coffea canephora HOM05D006647 ORTHO05D008232 9.3e-37 158.3 82 87.8
Ca_26823_v3 Cicer arietinum L. HOM05D006647 ORTHO05D008232 1.6e-36 157.5 81 88.9
BcaB01g01017 Brassica carinata HOM05D006647 ORTHO05D008232 2.3e-35 153.7 107 69.2
BcaB04g18808 Brassica carinata HOM05D006647 ORTHO05D008232 2.3e-35 153.7 107 69.2
Aa31LG10G17440 Aethionema arabicum HOM05D006647 ORTHO05D008232 5.1e-35 152.5 106 71.7
Cpa.g.sc234.13 Carica papaya HOM05D006647 ORTHO05D008232 6.7e-35 152.1 136 62.5
FAN01G1906 Fragaria x ananassa HOM05D006647 ORTHO05D008232 8.7e-35 151.8 92 79.3
Ah.10g029810 Amaranthus hybridus HOM05D006647 ORTHO05D008232 1.5e-34 151.0 92 78.3
Aa31LG10G17450 Aethionema arabicum HOM05D006647 ORTHO05D008232 6.0e-28 129.0 158 48.7
MBI04_g09488_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 1.8e-24 117.5 89 65.2
PRCOL_00005260 Prasinoderma coloniale HOM05D006647 ORTHO05D008232 2.2e-17 94.0 178 37.1


User provided reference genes

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