Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn002s41358 Nelumbo nucifera HOM05D000580 ORTHO05D001785 1.9e-26 121.7 61 100.0
Nn2g15463 Nelumbo nucifera HOM05D000580 ORTHO05D001785 1.9e-26 121.7 61 100.0
CAN.G134.1 Capsicum annuum HOM05D000580 ORTHO05D001785 7.4e-26 119.8 61 98.4
CARHR282220 Cardamine hirsuta HOM05D000580 ORTHO05D001785 7.4e-26 119.8 61 98.4
Duzib026G0003 Durio zibethinus HOM05D000580 ORTHO05D001362 7.4e-26 119.8 61 98.4
Duzib124G0006 Durio zibethinus HOM05D000580 ORTHO05D001362 7.4e-26 119.8 61 98.4
Duzib237G0002 Durio zibethinus HOM05D000580 ORTHO05D001362 7.4e-26 119.8 61 98.4
Duzib256G0004 Durio zibethinus HOM05D000580 ORTHO05D001362 7.4e-26 119.8 61 98.4
Migut.D01433 Erythranthe guttata HOM05D000580 ORTHO05D001785 7.4e-26 119.8 61 98.4
Gohir.1Z078400 Gossypium hirsutum HOM05D000580 ORTHO05D001785 7.4e-26 119.8 61 98.4
Gohir.A02G022101 Gossypium hirsutum HOM05D000580 ORTHO05D001785 7.4e-26 119.8 61 98.4
Gohir.A09G083720 Gossypium hirsutum HOM05D000580 ORTHO05D001785 7.4e-26 119.8 61 98.4
Gohir.A09G103750 Gossypium hirsutum HOM05D000580 ORTHO05D001785 7.4e-26 119.8 61 98.4
Gohir.A12G178675 Gossypium hirsutum HOM05D000580 ORTHO05D001785 7.4e-26 119.8 61 98.4
Gohir.A12G228650 Gossypium hirsutum HOM05D000580 ORTHO05D001785 7.4e-26 119.8 61 98.4
HanXRQChr00c0314g0573481 Helianthus annuus HOM05D000580 ORTHO05D001785 7.4e-26 119.8 61 98.4
HanXRQChr00c0394g0574571 Helianthus annuus HOM05D000580 ORTHO05D001785 7.4e-26 119.8 61 98.4
HanXRQChr00c0557g0575751 Helianthus annuus HOM05D000580 ORTHO05D001785 7.4e-26 119.8 61 98.4
HanXRQChr01g0020251 Helianthus annuus HOM05D000580 ORTHO05D001785 7.4e-26 119.8 61 98.4
HanXRQChr04g0127521 Helianthus annuus HOM05D000580 ORTHO05D001785 7.4e-26 119.8 61 98.4
HanXRQChr10g0284351 Helianthus annuus HOM05D000580 ORTHO05D001785 7.4e-26 119.8 61 98.4
HanXRQChr10g0318091 Helianthus annuus HOM05D000580 ORTHO05D001785 7.4e-26 119.8 61 98.4
HanXRQChr11g0326931 Helianthus annuus HOM05D000580 ORTHO05D001785 7.4e-26 119.8 61 98.4
HanXRQChr12g0369831 Helianthus annuus HOM05D000580 ORTHO05D001785 7.4e-26 119.8 61 98.4
HanXRQCPg0580151 Helianthus annuus HOM05D000580 ORTHO05D001785 7.4e-26 119.8 61 98.4
Lj2P1237T69 Lonicera japonica HOM05D000580 ORTHO05D001785 7.4e-26 119.8 61 98.4
PSO548G0060 Papaver somniferum HOM05D000580 ORTHO05D001785 7.4e-26 119.8 61 98.4
RcHm_v2.0_CPg0501911 Rosa chinensis HOM05D000580 ORTHO05D001785 7.4e-26 119.8 61 98.4
SalBow1G5124 Salvia bowleyana HOM05D000580 ORTHO05D001785 7.4e-26 119.8 61 98.4
Solyc00g500028.1 Solanum lycopersicum HOM05D000580 ORTHO05D001785 7.4e-26 119.8 61 98.4
Solyc00g500073.1 Solanum lycopersicum HOM05D000580 ORTHO05D001785 7.4e-26 119.8 61 98.4
Solyc00g500158.1 Solanum lycopersicum HOM05D000580 ORTHO05D001785 7.4e-26 119.8 61 98.4
MELO3C000399.2 Cucumis melo HOM05D000580 ORTHO05D001785 9.6e-26 119.4 60 98.3
HanXRQChr11g0321061 Helianthus annuus HOM05D000580 ORTHO05D001785 9.6e-26 119.4 60 98.3
AL2G20590 Arabidopsis lyrata HOM05D000580 ORTHO05D001785 2.1e-25 118.2 61 96.7
AL2G21690 Arabidopsis lyrata HOM05D000580 ORTHO05D001785 2.1e-25 118.2 61 96.7
ATCG00730 Arabidopsis thaliana HOM05D000580 ORTHO05D001785 2.1e-25 118.2 61 96.7
DCAR_032516 Daucus carota HOM05D000580 ORTHO05D001785 2.1e-25 118.2 61 96.7
Gohir.A03G137700 Gossypium hirsutum HOM05D000580 ORTHO05D001785 2.1e-25 118.2 61 96.7
HanXRQChr02g0032961 Helianthus annuus HOM05D000580 ORTHO05D001785 2.1e-25 118.2 61 96.7
HanXRQChr02g0052671 Helianthus annuus HOM05D000580 ORTHO05D001785 2.1e-25 118.2 61 96.7
HanXRQChr15g0486551 Helianthus annuus HOM05D000580 ORTHO05D001785 2.1e-25 118.2 61 96.7
PGR111G0048 Punica granatum HOM05D000580 ORTHO05D001785 2.1e-25 118.2 61 96.7
Ah.10g027190 Amaranthus hybridus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Ah.10g027480 Amaranthus hybridus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund04056 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund08804 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund12526 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund15206 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund19319 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund26843 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund27466 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund27479 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund27576 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund27893 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund27960 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund27983 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund28047 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund28107 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund28266 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund28324 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund28457 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund28467 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund28486 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund28517 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund28527 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund28630 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund28744 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund28757 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund28844 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund28888 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund29020 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund29034 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund29162 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund29215 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund29226 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund29232 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund29507 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund29523 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund29532 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund29535 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund29548 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund29561 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund29565 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund29572 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund29583 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund29591 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund29600 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund29603 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund29610 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund29680 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund29716 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund29876 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund29955 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund30033 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund30067 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund30082 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund30302 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund30445 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund30485 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
Hund30800 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.8e-25 117.9 61 95.1
CAN.G129.15 Capsicum annuum HOM05D000580 ORTHO05D001785 3.7e-25 117.5 61 96.7
CAN.G1595.5 Capsicum annuum HOM05D000580 ORTHO05D001785 3.7e-25 117.5 61 96.7
CAN.G307.12 Capsicum annuum HOM05D000580 ORTHO05D001785 3.7e-25 117.5 61 96.7
Gohir.A05G142175 Gossypium hirsutum HOM05D000580 ORTHO05D001785 3.7e-25 117.5 61 96.7
HanXRQChr02g0052531 Helianthus annuus HOM05D000580 ORTHO05D001785 3.7e-25 117.5 61 96.7
Potri.011G074600 Populus trichocarpa HOM05D000580 ORTHO05D001785 3.7e-25 117.5 60 95.0
Hund29665 Selenicereus undatus HOM05D000580 ORTHO05D001785 3.7e-25 117.5 60 95.0
HanXRQChr11g0345251 Helianthus annuus HOM05D000580 ORTHO05D001785 4.8e-25 117.1 61 96.7
C05p18880 Brassica napus HOM05D000580 ORTHO05D001785 6.3e-25 116.7 61 95.1
BolSC35t60666H Brassica oleracea HOM05D000580 ORTHO05D001785 6.3e-25 116.7 61 95.1
BolSC47t61078H Brassica oleracea HOM05D000580 ORTHO05D001785 6.3e-25 116.7 61 95.1
BraSC143t45634Z Brassica rapa HOM05D000580 ORTHO05D001785 6.3e-25 116.7 61 95.1
BraSC58t46499Z Brassica rapa HOM05D000580 ORTHO05D001785 6.3e-25 116.7 61 95.1
Medtr0002s0750 Medicago truncatula HOM05D000580 ORTHO05D001785 6.3e-25 116.7 61 95.1
LjContig00318g0018353 Lotus japonicus HOM05D000580 ORTHO05D001785 1.1e-24 115.9 61 93.4
LjContig00319g0017313 Lotus japonicus HOM05D000580 ORTHO05D001785 1.1e-24 115.9 61 93.4
LjContig00319g0022083 Lotus japonicus HOM05D000580 ORTHO05D001785 1.1e-24 115.9 61 93.4
CAN.G327.17 Capsicum annuum HOM05D000580 ORTHO05D001785 1.4e-24 115.5 61 93.4
BraSC59t46574Z Brassica rapa HOM05D000580 ORTHO05D001785 1.8e-24 115.2 61 93.4
MELO3C033573.2 Cucumis melo HOM05D000580 ORTHO05D001785 1.8e-24 115.2 61 91.8
HanXRQChr10g0303871 Helianthus annuus HOM05D000580 ORTHO05D001785 1.8e-24 115.2 59 96.6
Medtr4g034790 Medicago truncatula HOM05D000580 ORTHO05D001785 1.8e-24 115.2 61 93.4
CAN.G1367.7 Capsicum annuum HOM05D000580 ORTHO05D001785 4.1e-24 114.0 61 95.1
EL10As12g24033 Beta vulgaris HOM05D000580 ORTHO05D001785 5.3e-24 113.6 58 94.8
CAN.G127.15 Capsicum annuum HOM05D000580 ORTHO05D001785 9.0e-24 112.8 60 93.3
Sc15g0001500 Simmondsia chinensis HOM05D000580 ORTHO05D001785 9.0e-24 112.8 61 93.4
arahy.Tifrunner.gnm1.ann1.I9279U Arachis hypogaea HOM05D000580 ORTHO05D001785 2.6e-23 111.3 61 86.9
Lalb_Chr23g0274221 Lupinus albus HOM05D000580 ORTHO05D001785 3.4e-23 110.9 61 90.2
BraSC103t45448Z Brassica rapa HOM05D000580 ORTHO05D001785 5.9e-23 110.2 61 91.8
CAN.G219.33 Capsicum annuum HOM05D000580 ORTHO05D001785 5.9e-23 110.2 61 91.8
Hund27594 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.9e-23 110.2 56 94.6
arahy.Tifrunner.gnm1.ann1.GZ00NU Arachis hypogaea HOM05D000580 ORTHO05D001785 7.6e-23 109.8 57 91.2
Lj1P929T39 Lonicera japonica HOM05D000580 ORTHO05D001785 7.6e-23 109.8 61 88.5
Lj2P1239T124 Lonicera japonica HOM05D000580 ORTHO05D001785 1.7e-22 108.6 54 98.1
Pp3c21_5670 Physcomitrium patens HOM05D000580 ORTHO05D001785 1.7e-22 108.6 61 86.9
Psat5g206560 Pisum sativum HOM05D000580 ORTHO05D001785 1.7e-22 108.6 61 86.9
RcHm_v2.0_Chr3g0476911 Rosa chinensis HOM05D000580 ORTHO05D001785 2.2e-22 108.2 61 90.2
Lalb_Chr03g0039301 Lupinus albus HOM05D000580 ORTHO05D001785 3.8e-22 107.5 61 86.9
arahy.Tifrunner.gnm1.ann1.J8VLEJ Arachis hypogaea HOM05D000580 ORTHO05D001785 6.5e-22 106.7 57 89.5
BraSC138t45556Z Brassica rapa HOM05D000580 ORTHO05D001785 1.4e-21 105.5 62 90.3
Gorai.004G150600 Gossypium raimondii HOM05D000580 ORTHO05D001785 1.4e-21 105.5 61 88.5
EL10Ac5g11666 Beta vulgaris HOM05D000580 ORTHO05D001785 2.1e-20 101.7 55 89.1
Psat6g110880 Pisum sativum HOM05D000580 ORTHO05D001785 2.7e-20 101.3 52 94.2
Gohir.A07G130966 Gossypium hirsutum HOM05D000580 ORTHO05D001785 4.6e-20 100.5 50 98.0
MCO11G579 Micromonas commoda HOM05D000580 ORTHO05D001785 7.9e-20 99.8 61 72.1
Hund28676 Selenicereus undatus HOM05D000580 ORTHO05D001785 7.9e-20 99.8 55 87.3
Gorai.004G123400 Gossypium raimondii HOM05D000580 ORTHO05D001785 1.8e-19 98.6 55 87.3
Gohir.A01G137760 Gossypium hirsutum HOM05D000580 ORTHO05D001785 5.1e-19 97.1 54 88.9
Nn8g40935 Nelumbo nucifera HOM05D000580 ORTHO05D001785 8.7e-19 96.3 47 100.0
CAN.G1478.6 Capsicum annuum HOM05D000580 ORTHO05D001785 7.4e-18 93.2 49 93.9
Lalb_Chr18g0049331 Lupinus albus HOM05D000580 ORTHO05D001785 2.2e-17 91.7 61 77.0
Gohir.A12G178640 Gossypium hirsutum HOM05D000580 ORTHO05D001785 2.8e-17 91.3 60 81.7
HanXRQChr00c0593g0576331 Helianthus annuus HOM05D000580 ORTHO05D001785 6.9e-16 86.7 43 97.7
Nitab4.5_0001761g0200 Nicotiana tabacum HOM05D000445 ORTHO05D000314 2.6e-15 84.7 57 78.9
Solyc03g122000.4 Solanum lycopersicum HOM05D000580 ORTHO05D001785 7.7e-15 83.2 45 91.1
Sopen05g009050 Solanum pennellii HOM05D000580 ORTHO05D001785 1.1e-13 79.3 40 95.0
SMO086G0045 Selaginella moellendorffii HOM05D000580 ORTHO05D001785 3.6e-12 74.3 58 70.7
HanXRQChr04g0094331 Helianthus annuus HOM05D000580 ORTHO05D001785 1.4e-11 72.4 35 97.1
arahy.Tifrunner.gnm1.ann1.7X81Z4 Arachis hypogaea HOM05D000580 ORTHO05D001785 3.9e-11 70.9 35 91.4
Ah.10g028960 Amaranthus hybridus HOM05D000580 ORTHO05D001785 5.1e-11 70.5 33 100.0
Gohir.A12G178615 Gossypium hirsutum HOM05D000580 ORTHO05D001785 5.1e-11 70.5 33 100.0
Gohir.D01G102086 Gossypium hirsutum HOM05D000580 ORTHO05D001785 5.1e-11 70.5 35 94.3
Gorai.001G191300 Gossypium raimondii HOM05D000580 ORTHO05D001785 8.8e-11 69.7 35 91.4
HanXRQChr16g0513491 Helianthus annuus HOM05D000580 ORTHO05D001785 1.1e-10 69.3 33 97.0
BolSC29t60606H Brassica oleracea HOM05D000580 ORTHO05D001785 1.5e-10 68.9 33 97.0
Hund29543 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.5e-10 68.9 33 97.0
MELO3C034318.2 Cucumis melo HOM05D000580 ORTHO05D001785 3.3e-10 67.8 36 88.9
Gohir.D07G170866 Gossypium hirsutum HOM05D000580 ORTHO05D001785 3.3e-10 67.8 34 88.2
HanXRQChr05g0148481 Helianthus annuus HOM05D000580 ORTHO05D001785 3.3e-10 67.8 52 63.5
BolSC35t60733H Brassica oleracea HOM05D000580 ORTHO05D001785 3.7e-09 64.3 34 94.1
Migut.D01367 Erythranthe guttata HOM05D000580 ORTHO05D001785 3.7e-09 64.3 34 97.1
arahy.Tifrunner.gnm1.ann1.G4W793 Arachis hypogaea HOM05D000680 ORTHO05D001785 4.8e-09 63.9 33 81.8
SEGI_18833 Sequoiadendron giganteum HOM05D000580 ORTHO05D001289 6.3e-09 63.5 35 85.7
Lsat_1_v5_gn_2_129581 Lactuca sativa HOM05D000580 ORTHO05D011423 7.7e-07 56.6 29 96.6


User provided reference genes

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