Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g15034 Nelumbo nucifera HOM05D005854 ORTHO05D007175 3.4e-133 478.4 254 100.0
TAR383G0748 Trochodendron aralioides HOM05D005854 ORTHO05D007175 3.7e-111 405.2 250 86.0
PSO339G2746 Papaver somniferum HOM05D005854 ORTHO05D007175 4.7e-90 335.1 252 71.8
PSO801G0186 Papaver somniferum HOM05D005854 ORTHO05D007175 1.4e-89 333.6 251 72.1
CANSAT54G0206 Cannabis sativa HOM05D005854 ORTHO05D007175 3.0e-89 332.4 237 75.1
Hund23260 Selenicereus undatus HOM05D005854 ORTHO05D007175 6.7e-89 331.3 248 71.8
PGR031G0642 Punica granatum HOM05D005854 ORTHO05D007175 1.4e-86 323.6 249 70.7
CSS0045126 Camellia sinensis var. sinensis HOM05D005854 ORTHO05D007175 2.6e-85 319.3 254 71.3
Sc26g0000750 Simmondsia chinensis HOM05D005854 ORTHO05D007175 3.5e-85 318.9 236 72.9
RcHm_v2.0_Chr3g0451741 Rosa chinensis HOM05D005854 ORTHO05D007175 1.3e-84 317.0 245 71.0
ATR0594G138 Amborella trichopoda HOM05D005854 ORTHO05D007175 5.0e-84 315.1 252 70.2
MD04G1222200 Malus domestica HOM05D005854 ORTHO05D007175 1.5e-83 313.5 245 71.0
vmacro13205 Vaccinium macrocarpon HOM05D005854 ORTHO05D007175 5.5e-83 311.6 254 69.3
Cpa.g.sc10.16 Carica papaya HOM05D005854 ORTHO05D007175 4.7e-82 308.5 239 71.1
CiPaw.02G037800 Carya illinoinensis HOM05D005854 ORTHO05D007175 4.7e-82 308.5 239 71.1
Haze_15607 Corylus avellana HOM05D005854 ORTHO05D007175 4.7e-82 308.5 247 69.2
Hma1.2p1_0397F.1_g143770 Hydrangea macrophylla HOM05D005854 ORTHO05D007175 4.7e-82 308.5 257 67.7
TWI53G0615 Tripterygium wilfordii HOM05D005854 ORTHO05D007175 4.7e-82 308.5 235 71.5
Aqoxy5G03507 Aquilegia oxysepala HOM05D005854 ORTHO05D007175 6.1e-82 308.1 243 71.2
FvH4_6g03270 Fragaria vesca HOM05D005854 ORTHO05D007175 6.1e-82 308.1 252 68.7
HPP92_025111 Vanilla planifolia HOM05D005854 ORTHO05D007175 1.4e-81 307.0 236 72.0
Ah.05g179960 Amaranthus hybridus HOM05D005854 ORTHO05D007175 1.8e-81 306.6 248 68.5
EL10Ac1g00324 Beta vulgaris HOM05D005854 ORTHO05D007175 2.3e-81 306.2 243 68.3
AUR62004438 Chenopodium quinoa HOM05D005854 ORTHO05D007175 4.0e-81 305.4 250 66.8
Haze_23551 Corylus avellana HOM05D005854 ORTHO05D007175 4.0e-81 305.4 247 68.8
Oeu063662.1 Olea europaea HOM05D005854 ORTHO05D007175 5.2e-81 305.1 247 67.2
Gohir.A02G138400 Gossypium hirsutum HOM05D005854 ORTHO05D007175 8.8e-81 304.3 238 70.2
FAN05G3773 Fragaria x ananassa HOM05D005854 ORTHO05D007175 1.5e-80 303.5 237 69.6
Gorai.003G050300 Gossypium raimondii HOM05D005854 ORTHO05D007175 1.5e-80 303.5 238 70.2
Lalb_Chr10g0100131 Lupinus albus HOM05D005854 ORTHO05D007175 2.0e-80 303.1 244 68.0
AUR62023510 Chenopodium quinoa HOM05D005854 ORTHO05D007175 2.6e-80 302.8 250 66.0
Duzib147G0085 Durio zibethinus HOM05D005854 ORTHO05D007175 3.3e-80 302.4 240 70.0
Lj9P593T21 Lonicera japonica HOM05D005854 ORTHO05D007175 3.3e-80 302.4 253 67.6
CsaV3_3G008340 Cucumis sativus L. HOM05D005854 ORTHO05D007175 4.4e-80 302.0 244 67.2
Gohir.D03G049000 Gossypium hirsutum HOM05D005854 ORTHO05D007175 7.5e-80 301.2 238 69.3
Ciclev10016474m.g Citrus clementina HOM05D005854 ORTHO05D007175 9.7e-80 300.8 233 69.5
Thecc.01G121600 Theobroma cacao HOM05D005854 ORTHO05D007175 1.3e-79 300.4 238 70.2
Actinidia10096 Actinidia chinensis HOM05D005854 ORTHO05D007175 1.7e-79 300.1 249 67.9
Cfa006467 Carpinus fangiana HOM05D005854 ORTHO05D007175 1.7e-79 300.1 247 68.0
Glyma.07G060800 Glycine max HOM05D005854 ORTHO05D007175 3.7e-79 298.9 226 69.5
Cc02_g38850 Coffea canephora HOM05D005854 ORTHO05D007175 4.8e-79 298.5 254 66.5
Gohir.A03G042400 Gossypium hirsutum HOM05D005854 ORTHO05D007175 6.3e-79 298.1 237 69.2
MSTRG.17312 Avicennia marina HOM05D005854 ORTHO05D007175 1.8e-78 296.6 248 66.9
VMungo0331G0610 Vigna mungo HOM05D005854 ORTHO05D007175 3.1e-78 295.8 227 68.3
MBI04_g37933_MAGBIO Magnolia biondii HOM05D005854 ORTHO05D007175 5.3e-78 295.0 244 69.3
Phvul.010G108400 Phaseolus vulgaris HOM05D005854 ORTHO05D007175 7.0e-78 294.7 229 69.9
QL04p059766 Quercus lobata HOM05D005854 ORTHO05D007175 7.0e-78 294.7 237 67.5
Sed0001947 Sechium edule HOM05D005854 ORTHO05D007175 2.7e-77 292.7 244 64.8
Duzib187G0164 Durio zibethinus HOM05D005854 ORTHO05D007175 4.5e-77 292.0 238 68.9
Psat4g213880 Pisum sativum HOM05D005854 ORTHO05D007175 1.3e-76 290.4 251 66.5
Glyma.16G029400 Glycine max HOM05D005854 ORTHO05D007175 5.0e-76 288.5 221 69.7
SalBow5G1869 Salvia bowleyana HOM05D005854 ORTHO05D007175 6.5e-76 288.1 250 64.4
Ca_25392_v3 Cicer arietinum L. HOM05D005854 ORTHO05D007175 1.5e-75 287.0 250 65.6
arahy.Tifrunner.gnm1.ann1.788ENG Arachis hypogaea HOM05D005854 ORTHO05D007175 1.9e-75 286.6 243 66.3
arahy.Tifrunner.gnm1.ann1.GVN9XJ Arachis hypogaea HOM05D005854 ORTHO05D007175 1.9e-75 286.6 243 66.3
Lj3g0026359 Lotus japonicus HOM05D005854 ORTHO05D007175 2.5e-75 286.2 251 66.9
TPR.G21281 Trifolium pratense HOM05D005854 ORTHO05D007175 3.2e-75 285.8 250 64.8
SalBow6G6433 Salvia bowleyana HOM05D005854 ORTHO05D007175 5.5e-75 285.0 249 63.9
Atru.chr10.871 Acer truncatum HOM05D005854 ORTHO05D007175 2.7e-74 282.7 234 65.0
Manes.06G055200 Manihot esculenta HOM05D005854 ORTHO05D007175 2.7e-74 282.7 234 66.7
COL.COLO4_22426 Corchorus olitorius HOM05D005854 ORTHO05D007175 8.0e-74 281.2 233 66.1
Nitab4.5_0000305g0260 Nicotiana tabacum HOM05D005854 ORTHO05D007175 1.8e-73 280.0 240 63.8
DCAR_020830 Daucus carota HOM05D005854 ORTHO05D007175 2.3e-73 279.6 247 63.2
Sopen01g039170 Solanum pennellii HOM05D005854 ORTHO05D007175 2.3e-73 279.6 248 62.5
Solyc01g095420.3 Solanum lycopersicum HOM05D005854 ORTHO05D007175 1.2e-72 277.3 246 62.2
HanXRQChr04g0120611 Helianthus annuus HOM05D005854 ORTHO05D007175 2.0e-72 276.6 258 62.4
Lsat_1_v5_gn_7_1520 Lactuca sativa HOM05D005854 ORTHO05D007175 2.0e-72 276.6 253 62.1
Nitab4.5_0004613g0050 Nicotiana tabacum HOM05D005854 ORTHO05D007175 8.3e-71 271.2 239 62.8
CAN.G78.154 Capsicum annuum HOM05D005854 ORTHO05D007175 1.1e-70 270.8 248 61.7
Medtr8g023960 Medicago truncatula HOM05D005854 ORTHO05D007175 1.8e-70 270.0 230 67.4
Ca_23562_v3 Cicer arietinum L. HOM05D005854 ORTHO05D007175 2.4e-70 269.6 250 62.0
Migut.B01823 Erythranthe guttata HOM05D005854 ORTHO05D007175 3.1e-70 269.2 249 60.6
Gorai.003G131400 Gossypium raimondii HOM05D005854 ORTHO05D007175 9.1e-70 267.7 229 63.8
CARHR252180 Cardamine hirsuta HOM05D005854 ORTHO05D007175 2.0e-69 266.5 247 59.9
MELO3C006052.2 Cucumis melo HOM05D005854 ORTHO05D007175 2.7e-69 266.2 244 60.7
Peaxi162Scf01012g00238 Petunia axillaris HOM05D005854 ORTHO05D007175 3.5e-69 265.8 239 62.8
SGA_v2.0_scaffold11G05711 Striga asiatica HOM05D005854 ORTHO05D007175 5.9e-69 265.0 229 63.3
AT4G05400 Arabidopsis thaliana HOM05D005854 ORTHO05D007175 7.7e-69 264.6 244 59.4
Carub.0006s3331 Capsella rubella HOM05D005854 ORTHO05D007175 1.0e-68 264.2 241 58.9
Potri.011G098000 Populus trichocarpa HOM05D005854 ORTHO05D007175 1.3e-68 263.8 244 61.5
PGSC0003DMG400000203 Solanum tuberosum HOM05D005854 ORTHO05D007175 1.3e-68 263.8 232 63.4
Sabra11G0084900 Salix brachista HOM05D005854 ORTHO05D007175 6.5e-68 261.5 243 61.7
Sabra11G0091100 Salix brachista HOM05D005854 ORTHO05D007175 6.5e-68 261.5 243 61.7
Zm00001eb249970 Zea mays HOM05D005854 ORTHO05D007175 8.5e-68 261.2 245 62.4
Thhalv10026066m.g Eutrema salsugineum HOM05D005854 ORTHO05D007175 2.5e-67 259.6 247 60.7
AL6G48990 Arabidopsis lyrata HOM05D005854 ORTHO05D007175 9.4e-67 257.7 246 57.7
Carub.0007s2029 Capsella rubella HOM05D005854 ORTHO05D007175 1.2e-66 257.3 248 59.7
Os01g0511200 Oryza sativa ssp. japonica HOM05D005854 ORTHO05D007175 3.6e-66 255.8 245 59.6
Thhalv10028903m.g Eutrema salsugineum HOM05D005854 ORTHO05D007175 8.0e-66 254.6 247 57.5
Sp6g03690 Schrenkiella parvula HOM05D005854 ORTHO05D007175 8.0e-66 254.6 247 56.7
AT4G21140 Arabidopsis thaliana HOM05D005854 ORTHO05D007175 3.0e-65 252.7 234 59.8
C09p32360 Brassica napus HOM05D005854 ORTHO05D007175 3.4e-64 249.2 238 57.6
BolC9t56081H Brassica oleracea HOM05D005854 ORTHO05D007175 3.4e-64 249.2 238 57.6
FAN09G2134 Fragaria x ananassa HOM05D005854 ORTHO05D007175 7.5e-64 248.1 252 58.7
Rhsim07G0008000 Rhododendron simsii HOM05D005854 ORTHO05D007175 7.5e-64 248.1 253 59.3
AL7G32980 Arabidopsis lyrata HOM05D005854 ORTHO05D007175 1.7e-63 246.9 238 60.1
A09p25360 Brassica napus HOM05D005854 ORTHO05D007175 2.2e-63 246.5 244 56.6
Aa31LG9G9180 Aethionema arabicum HOM05D005854 ORTHO05D007175 2.8e-63 246.1 237 56.5
unitig_26.g8933 Utricularia gibba HOM05D005854 ORTHO05D007175 2.8e-63 246.1 253 58.5
BraA09t38118Z Brassica rapa HOM05D005854 ORTHO05D007175 3.1e-62 242.7 245 56.7
Gohir.D03G125200 Gossypium hirsutum HOM05D005854 ORTHO05D007175 3.5e-61 239.2 176 69.9
ECA236G4309 Erigeron canadensis HOM05D005854 ORTHO05D007175 9.5e-59 231.1 235 57.9
CARHR227720 Cardamine hirsuta HOM05D005854 ORTHO05D007175 2.8e-58 229.6 237 53.6
BcaB01g01902 Brassica carinata HOM05D005854 ORTHO05D007175 4.7e-58 228.8 245 54.3
Dinv32544 Davidia involucrata HOM05D005854 ORTHO05D007175 6.1e-58 228.4 197 66.0
A01p12480 Brassica napus HOM05D005854 ORTHO05D007175 4.9e-55 218.8 237 52.7
Cfa005769 Carpinus fangiana HOM05D005854 ORTHO05D007175 1.1e-54 217.6 197 63.5
BraA01t01194Z Brassica rapa HOM05D005854 ORTHO05D007175 1.4e-54 217.2 234 53.4
C01p15070 Brassica napus HOM05D005854 ORTHO05D007175 2.7e-53 213.0 236 53.0
BcaC09g51255 Brassica carinata HOM05D005854 ORTHO05D007175 1.0e-52 211.1 236 52.5
BolC1t01456H Brassica oleracea HOM05D005854 ORTHO05D007175 1.0e-52 211.1 236 52.5
BcaNung03840 Brassica carinata HOM05D005854 ORTHO05D007175 3.0e-52 209.5 238 50.8
Prupe.6G341300 Prunus persica HOM05D005854 ORTHO05D007175 2.8e-50 203.0 132 81.1
Oeu007833.1 Olea europaea HOM05D005854 ORTHO05D007175 3.4e-48 196.1 180 59.4
CDE04G0249 Ceratophyllum demersum HOM05D005854 ORTHO05D007175 3.3e-35 152.9 150 62.0
Sp7g19220 Schrenkiella parvula HOM05D005854 ORTHO05D007175 5.6e-35 152.1 123 63.4
MD12G1238400 Malus domestica HOM05D005854 ORTHO05D007175 4.7e-34 149.1 132 62.1
Actinidia20188 Actinidia chinensis HOM05D005854 ORTHO05D007175 3.4e-32 142.9 251 42.2
Nn3g18457 Nelumbo nucifera HOM05D005854 ORTHO05D007175 3.2e-30 136.3 86 82.6
Pp3c17_23470 Physcomitrium patens HOM05D005854 ORTHO05D007175 1.7e-28 130.6 223 38.1
TAR369G1106 Trochodendron aralioides HOM05D005854 ORTHO05D007175 4.3e-27 125.9 75 86.7
AagrBONN_evm.TU.Sc2ySwM_362.2286 Anthoceros agrestis HOM05D005854 ORTHO05D007175 7.3e-27 125.2 180 45.0
Cc00_g15140 Coffea canephora HOM05D005854 ORTHO05D007175 1.2e-26 124.4 147 51.0
Mapoly0007s0267 Marchantia polymorpha HOM05D005854 ORTHO05D007175 8.7e-20 101.7 143 47.6
Lsat_1_v5_gn_3_52500 Lactuca sativa HOM05D005854 ORTHO05D007175 1.1e-19 101.3 79 74.7
CBR_g40874 Chara braunii HOM05D005854 ORTHO05D007175 4.0e-17 92.8 87 56.3
FvH4_6g03230 Fragaria vesca HOM05D005854 ORTHO05D007175 1.9e-14 84.0 103 50.5
FvH4_6g03240 Fragaria vesca HOM05D005854 ORTHO05D007175 9.3e-14 81.6 60 66.7
Lsat_1_v5_gn_4_144561 Lactuca sativa HOM05D005854 ORTHO05D007175 3.5e-13 79.7 122 44.3
RcHm_v2.0_Chr3g0451651 Rosa chinensis HOM05D005854 ORTHO05D007175 1.5e-08 64.3 52 63.5
Lsat_1_v5_gn_3_52480 Lactuca sativa HOM05D005854 ORTHO05D007175 4.5e-08 62.8 68 51.5


User provided reference genes

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