Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g14698 Nelumbo nucifera HOM05D000861 ORTHO05D004749 2.4e-213 745.3 401 100.0
Dinv25026 Davidia involucrata HOM05D000861 ORTHO05D004749 1.1e-138 497.3 352 68.8
Nn5g30627 Nelumbo nucifera HOM05D000861 ORTHO05D004749 1.9e-138 496.5 341 70.7
TAR636G3394 Trochodendron aralioides HOM05D000861 ORTHO05D004749 5.6e-138 495.0 349 69.9
CSS0019173 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 1.3e-131 473.8 339 65.8
Haze_20079 Corylus avellana HOM05D000861 ORTHO05D004749 3.9e-131 472.2 353 65.2
Aqoxy4G02829 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 4.3e-130 468.8 349 65.0
Rhsim10G0079800 Rhododendron simsii HOM05D000861 ORTHO05D004749 5.2e-128 461.8 352 63.6
Potri.016G062900 Populus trichocarpa HOM05D000861 ORTHO05D004749 2.6e-127 459.5 348 63.8
TAR633G2067 Trochodendron aralioides HOM05D000861 ORTHO05D004749 3.4e-127 459.1 354 64.1
Manes.08G039800 Manihot esculenta HOM05D000861 ORTHO05D004749 4.4e-127 458.8 353 62.9
Cfa006350 Carpinus fangiana HOM05D000861 ORTHO05D004749 3.7e-126 455.7 352 63.9
Cc09_g02090 Coffea canephora HOM05D000861 ORTHO05D004749 8.3e-126 454.5 352 61.9
Lj2A1153T47 Lonicera japonica HOM05D000861 ORTHO05D004749 1.4e-125 453.8 346 62.7
RcHm_v2.0_Chr1g0331291 Rosa chinensis HOM05D000861 ORTHO05D004749 1.4e-125 453.8 338 63.6
PSO384G1311 Papaver somniferum HOM05D000861 ORTHO05D004749 3.2e-125 452.6 345 64.3
THA.LOC104826781 Tarenaya hassleriana HOM05D000861 ORTHO05D004749 4.1e-125 452.2 337 63.2
FAN10G0630 Fragaria x ananassa HOM05D000861 ORTHO05D004749 1.6e-124 450.3 351 60.4
TWI74G1428 Tripterygium wilfordii HOM05D000861 ORTHO05D004749 2.0e-124 449.9 351 62.1
CiPaw.09G025900 Carya illinoinensis HOM05D000861 ORTHO05D004749 2.7e-124 449.5 352 63.1
FAN01G1629 Fragaria x ananassa HOM05D000861 ORTHO05D004749 2.7e-124 449.5 351 60.7
MBI01_g21127_MAGBIO Magnolia biondii HOM05D000861 ORTHO05D004749 6.0e-124 448.4 336 64.6
QL07p025600 Quercus lobata HOM05D000861 ORTHO05D004749 7.8e-124 448.0 349 63.9
Haze_04427 Corylus avellana HOM05D000861 ORTHO05D004749 1.0e-123 447.6 352 62.5
FvH4_7g05020 Fragaria vesca HOM05D000861 ORTHO05D004749 1.3e-123 447.2 351 60.7
Sp3g10170 Schrenkiella parvula HOM05D000861 ORTHO05D004749 1.7e-123 446.8 349 62.2
CSS0040474 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 5.0e-123 445.3 311 66.6
FAN06G3356 Fragaria x ananassa HOM05D000861 ORTHO05D004749 1.1e-122 444.1 351 60.4
Lj1g0012940 Lotus japonicus HOM05D000861 ORTHO05D004749 2.1e-121 439.9 349 59.9
vmacro05483 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 2.1e-121 439.9 352 61.6
Sabra16G0065200 Salix brachista HOM05D000861 ORTHO05D004749 1.1e-120 437.6 350 61.4
Aqoxy2G01335 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 1.4e-120 437.2 339 63.4
GSVIVG01033426001 Vitis vinifera HOM05D000861 ORTHO05D004749 1.4e-120 437.2 352 60.5
CiPaw.10G023500 Carya illinoinensis HOM05D000861 ORTHO05D004749 1.8e-120 436.8 352 62.2
Migut.C01187 Erythranthe guttata HOM05D000861 ORTHO05D004749 1.8e-120 436.8 350 60.9
PGSC0003DMG400002212 Solanum tuberosum HOM05D000861 ORTHO05D004749 6.8e-120 434.9 354 60.2
CANSAT54G1949 Cannabis sativa HOM05D000861 ORTHO05D004749 1.7e-118 430.3 330 61.5
Hma1.2p1_0636F.1_g193240 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 2.2e-118 429.9 308 65.3
RcHm_v2.0_Chr1g0331341 Rosa chinensis HOM05D000861 ORTHO05D004749 3.7e-118 429.1 303 65.3
Sopen04g019180 Solanum pennellii HOM05D000861 ORTHO05D004749 3.7e-118 429.1 354 60.2
Lj1A65T56 Lonicera japonica HOM05D000861 ORTHO05D004749 8.3e-118 427.9 348 59.5
Ca_00040_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 1.1e-117 427.6 351 57.0
HanXRQChr12g0359061 Helianthus annuus HOM05D000861 ORTHO05D004749 1.1e-117 427.6 353 56.7
Solyc04g049290.2 Solanum lycopersicum HOM05D000861 ORTHO05D004749 1.4e-117 427.2 354 60.2
MELO3C009074.2 Cucumis melo HOM05D000861 ORTHO05D008567 1.9e-117 426.8 352 58.2
Sabra06G0151900 Salix brachista HOM05D000861 ORTHO05D004749 1.9e-117 426.8 392 54.3
Prupe.2G061200 Prunus persica HOM05D000861 ORTHO05D004749 3.2e-117 426.0 348 58.9
PGR004G1046 Punica granatum HOM05D000861 ORTHO05D004749 1.6e-116 423.7 340 61.8
Lalb_Chr20g0111111 Lupinus albus HOM05D000861 ORTHO05D004749 2.1e-116 423.3 346 56.4
SGA_v2.0_scaffold274G46507 Striga asiatica HOM05D000861 ORTHO05D004749 3.5e-116 422.5 350 59.1
CsaV3_4G031490 Cucumis sativus L. HOM05D000861 ORTHO05D004749 7.8e-116 421.4 352 57.4
Psat6g110040 Pisum sativum HOM05D000861 ORTHO05D004749 1.7e-115 420.2 351 56.7
Eucgr.A02509 Eucalyptus grandis HOM05D000861 ORTHO05D004749 2.3e-115 419.9 334 61.1
Lalb_Chr25g0287681 Lupinus albus HOM05D000861 ORTHO05D004749 6.6e-115 418.3 352 55.4
TPR.G14497 Trifolium pratense HOM05D000861 ORTHO05D004749 6.6e-115 418.3 351 56.7
Hma1.2p1_0516F.1_g170530 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 8.6e-115 417.9 350 60.0
Glyma.19G204100 Glycine max HOM05D000861 ORTHO05D004749 1.1e-114 417.5 349 57.3
Peaxi162Scf00195g00910 Petunia axillaris HOM05D000861 ORTHO05D004749 1.5e-114 417.2 338 58.6
AUR62025238 Chenopodium quinoa HOM05D000861 ORTHO05D004749 3.3e-114 416.0 351 58.1
Manes.09G040600 Manihot esculenta HOM05D000861 ORTHO05D004749 5.6e-114 415.2 311 63.7
Psat1g222880 Pisum sativum HOM05D000861 ORTHO05D004749 7.3e-114 414.8 351 55.8
Medtr1g054715 Medicago truncatula HOM05D000861 ORTHO05D004749 1.6e-113 413.7 351 56.7
TPR.G2104 Trifolium pratense HOM05D000861 ORTHO05D004749 1.6e-113 413.7 342 57.6
ECA234G4058 Erigeron canadensis HOM05D000861 ORTHO05D004749 3.6e-113 412.5 337 57.0
TPR.G29255 Trifolium pratense HOM05D000861 ORTHO05D004749 6.2e-113 411.8 341 57.8
Glyma.03G206500 Glycine max HOM05D000861 ORTHO05D004749 8.1e-113 411.4 351 56.4
Glyma.02G168400 Glycine max HOM05D000861 ORTHO05D004749 1.1e-112 411.0 352 56.2
Nitab4.5_0000575g0240 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.4e-112 410.6 352 58.2
VMungo1383G1884 Vigna mungo HOM05D000861 ORTHO05D004749 2.3e-112 409.8 345 57.4
Lsat_1_v5_gn_2_66000 Lactuca sativa HOM05D000861 ORTHO05D004749 4.0e-112 409.1 350 55.4
ClCG04G000550 Citrullus lanatus HOM05D000861 ORTHO05D004749 8.9e-112 407.9 352 56.8
Sabra16G0064900 Salix brachista HOM05D000861 ORTHO05D004749 1.2e-111 407.5 362 57.2
Peaxi162Scf00072g00619 Petunia axillaris HOM05D000861 ORTHO05D004749 1.5e-111 407.1 354 57.3
BcaB06g25559 Brassica carinata HOM05D000861 ORTHO05D004749 5.8e-111 405.2 356 55.6
PGSC0003DMG400016019 Solanum tuberosum HOM05D000861 ORTHO05D004749 3.8e-110 402.5 338 58.3
CAN.G186.36 Capsicum annuum HOM05D000861 ORTHO05D004749 2.4e-109 399.8 347 57.1
CDE05G2486 Ceratophyllum demersum HOM05D000861 ORTHO05D004749 3.2e-109 399.4 339 58.4
BcaC05g29310 Brassica carinata HOM05D000861 ORTHO05D004749 7.1e-109 398.3 338 58.0
BraA05t22541Z Brassica rapa HOM05D000861 ORTHO05D007385 2.1e-108 396.7 354 55.9
A05p37430 Brassica napus HOM05D000861 ORTHO05D007385 2.7e-108 396.4 354 55.9
arahy.Tifrunner.gnm1.ann1.2N6KDB Arachis hypogaea HOM05D000861 ORTHO05D004749 6.0e-108 395.2 354 55.1
Ciclev10012217m.g Citrus clementina HOM05D000861 ORTHO05D004749 6.0e-108 395.2 304 62.2
Sopen04g004750 Solanum pennellii HOM05D000861 ORTHO05D004749 7.8e-108 394.8 365 55.3
C05p55990 Brassica napus HOM05D000861 ORTHO05D004749 1.0e-107 394.4 338 57.4
arahy.Tifrunner.gnm1.ann1.5F6CY5 Arachis hypogaea HOM05D000861 ORTHO05D004749 2.3e-107 393.3 354 54.8
Solyc04g009600.3 Solanum lycopersicum HOM05D000861 ORTHO05D004749 3.0e-107 392.9 365 55.1
arahy.Tifrunner.gnm1.ann1.BI8ZDZ Arachis hypogaea HOM05D000861 ORTHO05D004749 5.1e-107 392.1 354 53.1
arahy.Tifrunner.gnm1.ann1.9W4D6L Arachis hypogaea HOM05D000861 ORTHO05D004749 6.6e-107 391.7 353 53.3
Lalb_Chr01g0017651 Lupinus albus HOM05D000861 ORTHO05D004749 8.6e-107 391.3 352 52.6
Nitab4.5_0007421g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.2e-105 387.5 352 55.4
Nitab4.5_0008820g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.8e-104 383.6 344 54.9
Sabra16G0065500 Salix brachista HOM05D000861 ORTHO05D004749 5.2e-104 382.1 363 54.5
MD02G1263700 Malus domestica HOM05D000861 ORTHO05D004749 6.9e-104 381.7 338 56.2
BcaB04g18704 Brassica carinata HOM05D000861 ORTHO05D004749 8.9e-104 381.3 269 67.7
VMungo0720G2154 Vigna mungo HOM05D000861 ORTHO05D004749 8.9e-104 381.3 339 52.8
Duzib128G1936 Durio zibethinus HOM05D000861 ORTHO05D004749 1.3e-102 377.5 348 54.6
unitig_749.g14024 Utricularia gibba HOM05D000861 ORTHO05D004749 2.9e-102 376.3 323 56.7
vmacro22548 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 3.8e-102 375.9 352 55.1
Ca_26442_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 8.4e-102 374.8 304 58.2
Dinv24029 Davidia involucrata HOM05D000861 ORTHO05D004749 1.4e-101 374.0 248 69.8
PSO425G0018 Papaver somniferum HOM05D000861 ORTHO05D004749 1.4e-101 374.0 284 64.4
MD07G1054500 Malus domestica HOM05D000861 ORTHO05D004749 1.9e-101 373.6 338 55.0
ATR0789G014 Amborella trichopoda HOM05D000861 ORTHO05D004749 3.2e-101 372.9 287 59.6
Sed0004581 Sechium edule HOM05D000861 ORTHO05D004749 4.2e-101 372.5 349 52.4
EL10Ac8g19073 Beta vulgaris HOM05D000861 ORTHO05D004749 7.1e-101 371.7 350 54.3
Duzib093G1597 Durio zibethinus HOM05D000861 ORTHO05D004749 7.1e-101 371.7 348 54.0
AL3G23550 Arabidopsis lyrata HOM05D000861 ORTHO05D004749 9.3e-101 371.3 338 55.6
AUR62028947 Chenopodium quinoa HOM05D000861 ORTHO05D004749 9.3e-101 371.3 305 58.0
AT3G11950 Arabidopsis thaliana HOM05D000861 ORTHO05D004749 1.3e-99 367.5 349 54.2
Carub.0003s1128 Capsella rubella HOM05D000861 ORTHO05D004749 5.1e-99 365.5 349 53.3
Thhalv10020413m.g Eutrema salsugineum HOM05D000861 ORTHO05D004749 5.1e-99 365.5 349 54.4
Phvul.007G262800 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 1.5e-98 364.0 351 50.4
Thecc.05G180600 Theobroma cacao HOM05D000861 ORTHO05D004749 1.5e-98 364.0 350 53.1
Atru.chr8.1223 Acer truncatum HOM05D000861 ORTHO05D004749 1.9e-98 363.6 350 53.7
CARHR086500 Cardamine hirsuta HOM05D000861 ORTHO05D004749 3.3e-98 362.8 356 53.7
MSTRG.26071 Avicennia marina HOM05D000861 ORTHO05D004749 1.3e-97 360.9 349 52.7
Oeu022105.1 Olea europaea HOM05D000861 ORTHO05D004749 2.1e-97 360.1 339 53.7
BraA03t12899Z Brassica rapa HOM05D000861 ORTHO05D004749 1.1e-96 357.8 339 53.1
C03p45380 Brassica napus HOM05D000861 ORTHO05D004749 1.4e-96 357.5 351 52.1
Oeu003219.1 Olea europaea HOM05D000861 ORTHO05D004749 1.4e-96 357.5 339 53.4
COL.COLO4_29438 Corchorus olitorius HOM05D000861 ORTHO05D004749 2.4e-96 356.7 347 52.2
Aa31LG3G5570 Aethionema arabicum HOM05D000861 ORTHO05D004749 2.0e-95 353.6 338 52.7
A03p37380 Brassica napus HOM05D000861 ORTHO05D004749 2.0e-95 353.6 339 52.5
Oeu051191.1 Olea europaea HOM05D000861 ORTHO05D004749 3.4e-95 352.8 344 52.0
DCAR_027450 Daucus carota HOM05D000861 ORTHO05D004749 9.9e-95 351.3 277 60.3
Phvul.001G200100 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 9.9e-95 351.3 304 55.3
BcaC01g04070 Brassica carinata HOM05D000861 ORTHO05D007385 2.9e-94 349.7 343 52.2
BolC3t16804H Brassica oleracea HOM05D000861 ORTHO05D004749 2.9e-94 349.7 343 52.2
Lj5g0002775 Lotus japonicus HOM05D000861 ORTHO05D004749 6.7e-91 338.6 351 50.1
Gohir.A09G130700 Gossypium hirsutum HOM05D000861 ORTHO05D004749 3.3e-90 336.3 345 48.4
Gohir.D01G123600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 7.4e-90 335.1 345 50.4
Gorai.002G154600 Gossypium raimondii HOM05D000861 ORTHO05D004749 1.6e-89 334.0 345 50.4
Sc13g0002540 Simmondsia chinensis HOM05D000861 ORTHO05D004749 1.1e-88 331.3 338 49.4
Gohir.A01G136400 Gossypium hirsutum HOM05D000861 ORTHO05D004749 1.8e-88 330.5 345 50.1
Ah.09g231540 Amaranthus hybridus HOM05D000861 ORTHO05D004749 2.4e-88 330.1 343 49.3
Cpa.g.sc85.15 Carica papaya HOM05D000861 ORTHO05D004749 1.4e-85 320.9 351 49.6
Nitab4.5_0000691g0150 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.6e-84 317.4 321 50.8
SHI28323 Sapria himalayana HOM05D000861 ORTHO05D004749 1.3e-83 314.3 336 46.7
Gohir.D09G126600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 1.3e-81 307.8 274 54.4
Zm00001eb246660 Zea mays HOM05D000861 ORTHO05D004749 2.1e-81 307.0 331 45.6
Os02g0605500 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 6.2e-81 305.4 326 48.5
Zm00001eb195790 Zea mays HOM05D000861 ORTHO05D004749 7.6e-71 271.9 320 45.9
Os12g0181300 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 1.0e-70 271.6 322 44.7
Os04g0218900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 4.2e-69 266.2 322 44.1
Os05g0305200 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 2.1e-68 263.8 322 44.1
Gorai.006G145500 Gossypium raimondii HOM05D000861 ORTHO05D004749 1.9e-66 257.3 274 47.4
Mapoly0057s0035 Marchantia polymorpha HOM05D000861 ORTHO05D004749 2.2e-65 253.8 324 40.7
Zm00001eb421970 Zea mays HOM05D000861 ORTHO05D004749 4.8e-65 252.7 290 45.9
Actinidia01592 Actinidia chinensis HOM05D000861 ORTHO05D004749 6.9e-64 248.8 211 58.3
AagrBONN_evm.TU.Sc2ySwM_228.1074 Anthoceros agrestis HOM05D000861 ORTHO05D004749 1.5e-58 231.1 338 37.3
Zm00001eb093630 Zea mays HOM05D000861 ORTHO05D004749 2.6e-58 230.3 320 41.2
HPP92_008306 Vanilla planifolia HOM05D000861 ORTHO05D004749 4.4e-58 229.6 216 50.5
Pp3c24_6130 Physcomitrium patens HOM05D000861 ORTHO05D004749 5.7e-58 229.2 306 40.5
Pp3c13_13880 Physcomitrium patens HOM05D000861 ORTHO05D004749 3.1e-56 223.4 316 34.8
CBR_g23522 Chara braunii HOM05D000861 ORTHO05D004749 1.2e-55 221.5 272 40.4
HPP92_003821 Vanilla planifolia HOM05D000861 ORTHO05D004749 1.7e-54 217.6 191 53.4
SEGI_19220 Sequoiadendron giganteum HOM05D000861 ORTHO05D004749 3.2e-53 213.4 273 37.7
SMO194G0050 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 5.2e-51 206.1 293 37.2
SMO358G0316 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 5.2e-51 206.1 293 37.2
TAR626G0577 Trochodendron aralioides HOM05D000861 ORTHO05D003237 5.9e-47 192.6 137 68.6
Actinidia17295 Actinidia chinensis HOM05D000861 ORTHO05D004749 2.9e-46 190.3 126 68.3
Os04g0217900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 5.0e-46 189.5 157 57.3
HPP92_003796 Vanilla planifolia HOM05D000861 ORTHO05D004749 2.8e-41 173.7 161 54.0
TAR626G1779 Trochodendron aralioides HOM05D000861 ORTHO05D004749 3.1e-40 170.2 118 70.3
SalBow6G1870 Salvia bowleyana HOM05D000861 ORTHO05D004749 1.5e-37 161.4 129 61.2
TAR371G0304 Trochodendron aralioides HOM05D000861 ORTHO05D003237 2.3e-35 154.1 111 68.5
Nitab4.5_0000691g0180 Nicotiana tabacum HOM05D000861 ORTHO05D004749 2.2e-33 147.5 160 46.9
TAR375G0848 Trochodendron aralioides HOM05D000861 ORTHO05D004749 8.6e-30 135.6 101 62.4
SMO361G0253 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 1.5e-26 124.8 259 31.3
RcHm_v2.0_Chr3g0486361 Rosa chinensis HOM05D000861 ORTHO05D004749 2.7e-23 114.0 125 46.4
HPP92_003822 Vanilla planifolia HOM05D000861 ORTHO05D004749 1.3e-22 111.7 95 56.8
RcHm_v2.0_Chr3g0486481 Rosa chinensis HOM05D000861 ORTHO05D004749 6.4e-17 92.8 63 63.5
RcHm_v2.0_Chr3g0486371 Rosa chinensis HOM05D000861 ORTHO05D004749 6.6e-14 82.8 70 57.1
Actinidia38607 Actinidia chinensis HOM05D000861 ORTHO05D004749 1.1e-11 75.5 102 43.1


User provided reference genes

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