Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g14617 Nelumbo nucifera HOM05D000527 ORTHO05D018152 7.5e-26 119.8 62 100.0
Nn1g02419 Nelumbo nucifera HOM05D000527 ORTHO05D018152 1.7e-14 82.0 55 83.6
Nn4g22662 Nelumbo nucifera HOM05D000527 ORTHO05D000559 1.7e-14 82.0 61 70.5
Nn1g06759 Nelumbo nucifera HOM05D000527 ORTHO05D018152 2.8e-12 74.7 47 87.2
COL.COLO4_30129 Corchorus olitorius HOM05D000527 ORTHO05D000559 2.9e-09 64.7 62 61.3
Nn6g34167 Nelumbo nucifera HOM05D067045 ORTHO05D018152 4.9e-09 63.9 40 82.5
TAR374G0713 Trochodendron aralioides HOM05D000527 ORTHO05D000559 4.9e-09 63.9 61 60.7
Oeu057058.1 Olea europaea HOM05D000527 ORTHO05D000559 6.4e-09 63.5 62 59.7
FAN08G2485 Fragaria x ananassa HOM05D000527 ORTHO05D000559 8.3e-09 63.2 62 61.3
FAN04G1684 Fragaria x ananassa HOM05D000527 ORTHO05D000559 1.1e-08 62.8 62 59.7
FAN18G0080 Fragaria x ananassa HOM05D000527 ORTHO05D000559 1.1e-08 62.8 62 59.7
Dinv20617 Davidia involucrata HOM05D000527 ORTHO05D000559 1.4e-08 62.4 61 62.3
Prupe.5G169000 Prunus persica HOM05D000527 ORTHO05D000559 1.4e-08 62.4 62 61.3
CiPaw.11G022300 Carya illinoinensis HOM05D000527 ORTHO05D000559 1.9e-08 62.0 63 65.1
FvH4_5g05860 Fragaria vesca HOM05D000527 ORTHO05D000559 1.9e-08 62.0 62 59.7
Potri.T124908 Populus trichocarpa HOM05D000527 ORTHO05D000559 1.9e-08 62.0 61 60.7
COL.COLO4_30132 Corchorus olitorius HOM05D000527 ORTHO05D000559 2.4e-08 61.6 61 55.7
MBI16_g23857_MAGBIO Magnolia biondii HOM05D000527 ORTHO05D000559 2.4e-08 61.6 61 57.4
PGSC0003DMG400000513 Solanum tuberosum HOM05D000527 ORTHO05D000559 2.4e-08 61.6 61 55.7
Eucgr.K02813 Eucalyptus grandis HOM05D000527 ORTHO05D000559 3.2e-08 61.2 61 59.0
RcHm_v2.0_Chr7g0192961 Rosa chinensis HOM05D000527 ORTHO05D000559 3.2e-08 61.2 62 58.1
Sopen02g031260 Solanum pennellii HOM05D000527 ORTHO05D000559 3.2e-08 61.2 61 55.7
TAR629G3000 Trochodendron aralioides HOM05D000527 ORTHO05D000559 3.2e-08 61.2 61 60.7
PSO832G3060 Papaver somniferum HOM05D000527 ORTHO05D000559 4.1e-08 60.8 60 58.3
Atru.chr6.2360 Acer truncatum HOM05D000527 ORTHO05D000559 5.4e-08 60.5 59 59.3
Atru.chr6.2362 Acer truncatum HOM05D000527 ORTHO05D018152 5.4e-08 60.5 59 59.3
CAN.G473.1 Capsicum annuum HOM05D000527 ORTHO05D000559 5.4e-08 60.5 61 57.4
Cfa019178 Carpinus fangiana HOM05D000527 ORTHO05D000559 5.4e-08 60.5 62 59.7
Haze_07556 Corylus avellana HOM05D000527 ORTHO05D000559 5.4e-08 60.5 62 59.7
DCAR_011247 Daucus carota HOM05D000527 ORTHO05D000559 5.4e-08 60.5 61 54.1
Psat0s2597g0160 Pisum sativum HOM05D000527 ORTHO05D000559 5.4e-08 60.5 61 54.1
Thecc.03G023500 Theobroma cacao HOM05D000527 ORTHO05D000559 5.4e-08 60.5 61 55.7
Glyma.06G179200 Glycine max HOM05D000527 ORTHO05D000559 7.1e-08 60.1 62 56.5
PSO063G0204 Papaver somniferum HOM05D000527 ORTHO05D000559 7.1e-08 60.1 60 56.7
Ciclev10014333m.g Citrus clementina HOM05D000527 ORTHO05D000559 9.2e-08 59.7 62 56.5
Duzib147G0050 Durio zibethinus HOM05D000527 ORTHO05D000559 1.2e-07 59.3 59 55.9
CSS0021637 Camellia sinensis var. sinensis HOM05D000527 ORTHO05D000559 1.6e-07 58.9 61 57.4
CSS0025347 Camellia sinensis var. sinensis HOM05D000527 ORTHO05D000559 1.6e-07 58.9 61 59.0
CSS0032677 Camellia sinensis var. sinensis HOM05D000527 ORTHO05D000559 1.6e-07 58.9 61 59.0
CSS0050491 Camellia sinensis var. sinensis HOM05D000527 ORTHO05D000559 1.6e-07 58.9 61 57.4
CANSAT64G2129 Cannabis sativa HOM05D000527 ORTHO05D000559 1.6e-07 58.9 59 59.3
Aqoxy108s001 Aquilegia oxysepala HOM05D000527 ORTHO05D000559 2.1e-07 58.5 60 55.0
Aqoxy3G01065 Aquilegia oxysepala HOM05D000527 ORTHO05D000559 2.1e-07 58.5 60 55.0
Phvul.009G175400 Phaseolus vulgaris HOM05D000527 ORTHO05D000559 2.1e-07 58.5 62 56.5
Aqoxy6G01015 Aquilegia oxysepala HOM05D000527 ORTHO05D000559 2.7e-07 58.2 61 55.7
CsaV3_3G042690 Cucumis sativus L. HOM05D000527 ORTHO05D000559 2.7e-07 58.2 62 50.0
Gohir.A07G062600 Gossypium hirsutum HOM05D000527 ORTHO05D000559 2.7e-07 58.2 61 54.1
MD06G1169800 Malus domestica HOM05D000527 ORTHO05D000559 2.7e-07 58.2 61 57.4
MD14G1175300 Malus domestica HOM05D000527 ORTHO05D000559 2.7e-07 58.2 62 54.8
Nitab4.5_0005432g0030 Nicotiana tabacum HOM05D000527 ORTHO05D000559 2.7e-07 58.2 61 54.1
Solyc02g086530.4 Solanum lycopersicum HOM05D000527 ORTHO05D000559 2.7e-07 58.2 61 52.5
MSTRG.24032 Avicennia marina HOM05D000527 ORTHO05D000559 3.5e-07 57.8 62 53.2
Haze_14725 Corylus avellana HOM05D000527 ORTHO05D000559 3.5e-07 57.8 59 59.3
Potri.007G123400 Populus trichocarpa HOM05D000527 ORTHO05D000559 3.5e-07 57.8 59 55.9
QL10p008476 Quercus lobata HOM05D000527 ORTHO05D000559 3.5e-07 57.8 62 58.1
Sabra07G0099900 Salix brachista HOM05D000527 ORTHO05D000559 3.5e-07 57.8 59 55.9
TWI39G0007 Tripterygium wilfordii HOM05D000527 ORTHO05D000559 3.5e-07 57.8 61 55.7
Atru.chr9.2542 Acer truncatum HOM05D000527 ORTHO05D000559 4.6e-07 57.4 62 51.6
Eucgr.J02233 Eucalyptus grandis HOM05D000527 ORTHO05D000559 4.6e-07 57.4 61 55.7
Gorai.001G070800 Gossypium raimondii HOM05D000527 ORTHO05D000559 4.6e-07 57.4 60 55.0
Nitab4.5_0002682g0060 Nicotiana tabacum HOM05D000527 ORTHO05D000559 4.6e-07 57.4 61 54.1
ATR1152G070 Amborella trichopoda HOM05D000527 ORTHO05D000559 6.0e-07 57.0 63 52.4
ECA246G4686 Erigeron canadensis HOM05D000527 ORTHO05D000559 6.0e-07 57.0 61 52.5
Potri.004G207900 Populus trichocarpa HOM05D000527 ORTHO05D000559 6.0e-07 57.0 59 54.2
Potri.017G036700 Populus trichocarpa HOM05D000527 ORTHO05D000559 6.0e-07 57.0 59 55.9
QL02p075137 Quercus lobata HOM05D000527 ORTHO05D000559 6.0e-07 57.0 59 55.9
Cfa007383 Carpinus fangiana HOM05D000527 ORTHO05D000559 7.8e-07 56.6 59 57.6
Ca_21950_v3 Cicer arietinum L. HOM05D000527 ORTHO05D000559 7.8e-07 56.6 62 54.8
Migut.K01390 Erythranthe guttata HOM05D000527 ORTHO05D000559 7.8e-07 56.6 61 54.1
FvH4_6g51380 Fragaria vesca HOM05D000527 ORTHO05D000559 7.8e-07 56.6 59 55.9
FAN05G0436 Fragaria x ananassa HOM05D000527 ORTHO05D000559 7.8e-07 56.6 59 55.9
FAN09G3763 Fragaria x ananassa HOM05D000527 ORTHO05D000559 7.8e-07 56.6 59 55.9
Manes.17G115500 Manihot esculenta HOM05D000527 ORTHO05D000559 7.8e-07 56.6 59 59.3
QL11p046642 Quercus lobata HOM05D000527 ORTHO05D000559 7.8e-07 56.6 59 55.9
vmacro16633 Vaccinium macrocarpon HOM05D000527 ORTHO05D000559 7.8e-07 56.6 62 54.8
Ciclev10018941m.g Citrus clementina HOM05D000527 ORTHO05D000559 1.0e-06 56.2 60 55.0
Manes.06G108300 Manihot esculenta HOM05D000527 ORTHO05D000559 1.0e-06 56.2 61 54.1
Oeu063469.1 Olea europaea HOM05D000527 ORTHO05D000559 1.0e-06 56.2 60 53.3
Rhsim12G0166700 Rhododendron simsii HOM05D000527 ORTHO05D000559 1.0e-06 56.2 62 53.2
RcHm_v2.0_Chr2g0173061 Rosa chinensis HOM05D000527 ORTHO05D000559 1.0e-06 56.2 59 55.9
Sabra15G0105300 Salix brachista HOM05D000527 ORTHO05D000559 1.0e-06 56.2 61 54.1
Thecc.04G015400 Theobroma cacao HOM05D000527 ORTHO05D000559 1.0e-06 56.2 59 55.9
Actinidia25102 Actinidia chinensis HOM05D000527 ORTHO05D000111 1.3e-06 55.8 60 51.7
Ca_16150_v3 Cicer arietinum L. HOM05D000527 ORTHO05D000559 1.3e-06 55.8 62 48.4
Gohir.D07G067200 Gossypium hirsutum HOM05D000527 ORTHO05D000559 1.3e-06 55.8 60 53.3
Lsat_1_v5_gn_0_32100 Lactuca sativa HOM05D000527 ORTHO05D000559 1.3e-06 55.8 61 50.8
Medtr3g077280 Medicago truncatula HOM05D000527 ORTHO05D000559 1.3e-06 55.8 61 50.8
Sabra17G0024100 Salix brachista HOM05D000527 ORTHO05D000559 1.3e-06 55.8 59 54.2
TPR.G33607 Trifolium pratense HOM05D000527 ORTHO05D000559 1.3e-06 55.8 61 50.8
TWI56G0365 Tripterygium wilfordii HOM05D000527 ORTHO05D000559 1.3e-06 55.8 60 53.3
VMungo0464G0830 Vigna mungo HOM05D000527 ORTHO05D000559 1.3e-06 55.8 59 57.6
GSVIVG01032425001 Vitis vinifera HOM05D000527 ORTHO05D000559 1.3e-06 55.8 61 52.5
CiPaw.03G042100 Carya illinoinensis HOM05D000527 ORTHO05D000559 1.7e-06 55.5 59 55.9
Medtr4g105250 Medicago truncatula HOM05D000527 ORTHO05D000559 1.7e-06 55.5 62 51.6
Oeu054617.1 Olea europaea HOM05D000527 ORTHO05D000559 1.7e-06 55.5 62 51.6
Lj1g0025492 Lotus japonicus HOM05D000527 ORTHO05D000559 2.3e-06 55.1 62 51.6
PGR142G3965 Punica granatum HOM05D000527 ORTHO05D000559 2.3e-06 55.1 61 52.5
unitig_0.g1602 Utricularia gibba HOM05D000527 ORTHO05D000559 2.3e-06 55.1 62 53.2
FAN14G1351 Fragaria x ananassa HOM05D000527 ORTHO05D000559 3.0e-06 54.7 59 52.5
FAN14G4154 Fragaria x ananassa HOM05D000527 ORTHO05D000559 3.0e-06 54.7 59 52.5
Gohir.A05G357500 Gossypium hirsutum HOM05D000527 ORTHO05D000559 3.0e-06 54.7 59 54.2
Lalb_Chr08g0236651 Lupinus albus HOM05D000527 ORTHO05D000559 3.0e-06 54.7 61 55.7
Prupe.3G289900 Prunus persica HOM05D000527 ORTHO05D000559 3.0e-06 54.7 59 54.2
Thecc.03G023700 Theobroma cacao HOM05D000527 ORTHO05D000559 3.0e-06 54.7 61 52.5
Phvul.004G007100 Phaseolus vulgaris HOM05D000527 ORTHO05D000559 3.9e-06 54.3 59 55.9
QL11p046744 Quercus lobata HOM05D000527 ORTHO05D000559 3.9e-06 54.3 59 54.2
Ah.02g110790 Amaranthus hybridus HOM05D000527 ORTHO05D000559 5.1e-06 53.9 60 55.0
COL.COLO4_02745 Corchorus olitorius HOM05D000527 ORTHO05D000559 5.1e-06 53.9 59 52.5
Lj7C597T15 Lonicera japonica HOM05D000527 ORTHO05D000559 5.1e-06 53.9 60 48.3
Peaxi162Scf00089g01521 Petunia axillaris HOM05D000527 ORTHO05D000559 5.1e-06 53.9 61 50.8
Migut.H00086 Erythranthe guttata HOM05D000527 ORTHO05D000559 6.6e-06 53.5 60 51.7
MBI10_g00727_MAGBIO Magnolia biondii HOM05D000527 ORTHO05D000559 6.6e-06 53.5 60 48.3
Peaxi162Scf00198g00212 Petunia axillaris HOM05D000527 ORTHO05D000559 6.6e-06 53.5 60 53.3
Solyc03g112500.4 Solanum lycopersicum HOM05D000527 ORTHO05D000559 6.6e-06 53.5 61 50.8
arahy.Tifrunner.gnm1.ann1.DBZB80 Arachis hypogaea HOM05D000527 ORTHO05D000559 8.6e-06 53.1 64 51.6
MELO3C009979.2 Cucumis melo HOM05D000527 ORTHO05D000559 8.6e-06 53.1 62 46.8
Lj2g0002756 Lotus japonicus HOM05D000527 ORTHO05D000559 8.6e-06 53.1 62 51.6
Medtr6g004880 Medicago truncatula HOM05D000527 ORTHO05D000559 8.6e-06 53.1 60 55.0
Sc16g0003230 Simmondsia chinensis HOM05D000527 ORTHO05D000559 8.6e-06 53.1 62 51.6
VMungo1309G1870 Vigna mungo HOM05D000527 ORTHO05D000559 8.6e-06 53.1 62 50.0


User provided reference genes

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