Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g14523 Nelumbo nucifera HOM05D005995 ORTHO05D007362 2.6e-95 352.1 179 100.0
CiPaw.14G056700 Carya illinoinensis HOM05D005995 ORTHO05D007362 3.9e-75 285.0 177 80.2
QL01p039263 Quercus lobata HOM05D005995 ORTHO05D007362 8.1e-73 277.3 177 78.0
Thecc.09G353200 Theobroma cacao HOM05D005995 ORTHO05D007362 8.1e-73 277.3 177 78.5
Cpa.g.sc2.418 Carica papaya HOM05D005995 ORTHO05D007362 1.4e-72 276.6 176 78.4
Potri.001G279700 Populus trichocarpa HOM05D005995 ORTHO05D007362 4.0e-72 275.0 176 77.3
GSVIVG01024692001 Vitis vinifera HOM05D005995 ORTHO05D007362 6.9e-72 274.2 177 80.2
Haze_24375 Corylus avellana HOM05D005995 ORTHO05D007362 9.0e-72 273.9 177 78.0
Aqoxy4G02443 Aquilegia oxysepala HOM05D005995 ORTHO05D007362 1.5e-71 273.1 177 76.3
TAR131G0002 Trochodendron aralioides HOM05D005995 ORTHO05D007362 1.5e-71 273.1 177 78.0
Cc01_g14560 Coffea canephora HOM05D005995 ORTHO05D007362 2.0e-71 272.7 177 75.7
Manes.17G003200 Manihot esculenta HOM05D005995 ORTHO05D007362 2.0e-71 272.7 177 77.4
TAR623G0738 Trochodendron aralioides HOM05D005995 ORTHO05D007362 2.0e-71 272.7 177 77.4
Duzib170G0863 Durio zibethinus HOM05D005995 ORTHO05D007362 2.6e-71 272.3 176 77.8
arahy.Tifrunner.gnm1.ann1.SCP5PP Arachis hypogaea HOM05D005995 ORTHO05D007362 9.9e-71 270.4 182 75.8
CSS0037016 Camellia sinensis var. sinensis HOM05D005995 ORTHO05D007362 1.3e-70 270.0 177 76.8
CSS0047754 Camellia sinensis var. sinensis HOM05D005995 ORTHO05D007362 1.3e-70 270.0 177 76.8
Potri.009G074400 Populus trichocarpa HOM05D005995 ORTHO05D007362 3.8e-70 268.5 177 75.7
COL.COLO4_11080 Corchorus olitorius HOM05D005995 ORTHO05D007362 4.9e-70 268.1 177 76.3
Dinv09649 Davidia involucrata HOM05D002227 ORTHO05D002337 4.9e-70 268.1 177 77.4
Ciclev10029374m.g Citrus clementina HOM05D005995 ORTHO05D007362 6.4e-70 267.7 178 76.4
Cfa011735 Carpinus fangiana HOM05D005995 ORTHO05D007362 1.4e-69 266.5 177 76.3
Sabra09G0056500 Salix brachista HOM05D005995 ORTHO05D007362 1.4e-69 266.5 177 74.0
Glyma.11G168600 Glycine max HOM05D005995 ORTHO05D007362 2.4e-69 265.8 180 76.7
Phvul.006G070800 Phaseolus vulgaris HOM05D005995 ORTHO05D007362 3.2e-69 265.4 178 75.3
Duzib168G2258 Durio zibethinus HOM05D005995 ORTHO05D007362 5.4e-69 264.6 177 75.7
TAR633G2447 Trochodendron aralioides HOM05D005995 ORTHO05D007362 5.4e-69 264.6 179 75.4
VMungo0540G0986 Vigna mungo HOM05D005995 ORTHO05D007362 2.1e-68 262.7 178 74.7
Actinidia23218 Actinidia chinensis HOM05D005995 ORTHO05D007362 1.8e-67 259.6 177 74.6
CiPaw.13G073700 Carya illinoinensis HOM05D005995 ORTHO05D007362 1.8e-67 259.6 168 75.6
FAN25G2223 Fragaria x ananassa HOM05D005995 ORTHO05D007362 1.1e-66 256.9 178 73.6
FAN21G0787 Fragaria x ananassa HOM05D005995 ORTHO05D007362 1.9e-66 256.1 180 73.3
EL10Ac3g05994 Beta vulgaris HOM05D005995 ORTHO05D007362 4.3e-66 255.0 180 70.6
AUR62023851 Chenopodium quinoa HOM05D005995 ORTHO05D007362 9.6e-66 253.8 178 70.8
Nitab4.5_0013485g0010 Nicotiana tabacum HOM05D005995 ORTHO05D007362 1.3e-65 253.4 177 73.4
Sopen06g033540 Solanum pennellii HOM05D005995 ORTHO05D007362 1.3e-65 253.4 177 74.0
PGSC0003DMG400030447 Solanum tuberosum HOM05D005995 ORTHO05D007362 1.3e-65 253.4 177 74.0
Rhsim13G0066700 Rhododendron simsii HOM05D005995 ORTHO05D007362 4.8e-65 251.5 166 75.3
FAN16G3099 Fragaria x ananassa HOM05D005995 ORTHO05D007362 6.2e-65 251.1 180 72.2
Solyc06g082160.4 Solanum lycopersicum HOM05D005995 ORTHO05D007362 1.4e-64 250.0 177 72.9
Hund06617 Selenicereus undatus HOM05D005995 ORTHO05D007362 3.1e-64 248.8 179 70.9
CAN.G1095.10 Capsicum annuum HOM05D005995 ORTHO05D007362 4.0e-64 248.4 177 72.3
Oeu031050.1 Olea europaea HOM05D005995 ORTHO05D007362 5.3e-64 248.1 177 72.9
vmacro02942 Vaccinium macrocarpon HOM05D005995 ORTHO05D007362 3.4e-63 245.4 165 72.7
Ca_14969_v3 Cicer arietinum L. HOM05D005995 ORTHO05D007362 7.6e-63 244.2 174 70.7
Glyma.18G060000 Glycine max HOM05D005995 ORTHO05D007362 3.8e-62 241.9 174 73.0
Gohir.A13G233500 Gossypium hirsutum HOM05D005995 ORTHO05D007362 4.9e-62 241.5 152 80.3
FvH4_3g39150 Fragaria vesca HOM05D005995 ORTHO05D007362 1.1e-61 240.4 180 69.4
ATR0681G053 Amborella trichopoda HOM05D005995 ORTHO05D007362 1.4e-61 240.0 181 68.5
MELO3C020526.2 Cucumis melo HOM05D005995 ORTHO05D007362 1.4e-61 240.0 177 67.8
CsaV3_1G036430 Cucumis sativus L. HOM05D005995 ORTHO05D007362 1.9e-61 239.6 177 67.2
MSTRG.10034 Avicennia marina HOM05D005995 ORTHO05D007362 4.2e-61 238.4 172 70.3
ClCG03G000500 Citrullus lanatus HOM05D005995 ORTHO05D007362 4.2e-61 238.4 177 67.2
Lj6g0019722 Lotus japonicus HOM05D005995 ORTHO05D007362 4.2e-61 238.4 165 74.5
RcHm_v2.0_Chr5g0070551 Rosa chinensis HOM05D005995 ORTHO05D007362 5.5e-61 238.0 180 68.3
FAN11G1452 Fragaria x ananassa HOM05D005995 ORTHO05D007362 7.1e-61 237.7 180 68.9
PGR031G2980 Punica granatum HOM05D005995 ORTHO05D007362 7.1e-61 237.7 179 68.2
Eucgr.B02232 Eucalyptus grandis HOM05D005995 ORTHO05D007362 9.3e-61 237.3 147 79.6
Lalb_Chr20g0114841 Lupinus albus HOM05D005995 ORTHO05D007362 1.2e-60 236.9 180 69.4
arahy.Tifrunner.gnm1.ann1.6174C5 Arachis hypogaea HOM05D005995 ORTHO05D007362 1.6e-60 236.5 169 73.4
Sed0015986 Sechium edule HOM05D005995 ORTHO05D007362 2.1e-60 236.1 177 65.5
Medtr3g465040 Medicago truncatula HOM05D005995 ORTHO05D007362 7.9e-60 234.2 177 67.2
MD03G1063100 Malus domestica HOM05D005995 ORTHO05D007362 1.0e-59 233.8 180 67.8
CDE10G1344 Ceratophyllum demersum HOM05D005995 ORTHO05D007362 2.3e-59 232.6 172 72.1
DCAR_015647 Daucus carota HOM05D005995 ORTHO05D007362 2.3e-59 232.6 176 68.2
CANSAT54G2854 Cannabis sativa HOM05D005995 ORTHO05D007362 3.0e-59 232.3 174 69.0
Psat0s2070g0120 Pisum sativum HOM05D005995 ORTHO05D007362 3.9e-59 231.9 177 66.1
Peaxi162Scf00540g00015 Petunia axillaris HOM05D005995 ORTHO05D007362 6.7e-59 231.1 177 68.9
TPR.G32896 Trifolium pratense HOM05D005995 ORTHO05D007362 1.5e-58 229.9 178 69.1
Sabra16G0173300 Salix brachista HOM05D005995 ORTHO05D007362 4.3e-58 228.4 206 60.7
Actinidia02782 Actinidia chinensis HOM05D005995 ORTHO05D007362 7.4e-58 227.6 135 83.7
Lalb_Chr18g0051191 Lupinus albus HOM05D005995 ORTHO05D007362 7.4e-58 227.6 179 67.0
Nitab4.5_0002043g0030 Nicotiana tabacum HOM05D005995 ORTHO05D007362 7.4e-58 227.6 177 67.2
Atru.chr3.4142 Acer truncatum HOM05D005995 ORTHO05D007362 4.8e-57 224.9 236 55.5
Gohir.D13G239100 Gossypium hirsutum HOM05D005995 ORTHO05D007362 1.1e-56 223.8 177 66.7
Gorai.013G270000 Gossypium raimondii HOM05D005995 ORTHO05D007362 1.1e-56 223.8 177 66.7
SGA_v2.0_scaffold371G50155 Striga asiatica HOM05D005995 ORTHO05D007362 1.1e-56 223.8 158 70.3
Prupe.6G053100 Prunus persica HOM05D005995 ORTHO05D007362 1.8e-56 223.0 179 65.9
Sp6g20270 Schrenkiella parvula HOM05D005995 ORTHO05D007362 5.3e-56 221.5 172 63.4
AL8G34810 Arabidopsis lyrata HOM05D005995 ORTHO05D007362 2.6e-55 219.2 172 62.8
Carub.0008s1918 Capsella rubella HOM05D005995 ORTHO05D007362 2.6e-55 219.2 172 63.4
PSO170G4292 Papaver somniferum HOM05D005995 ORTHO05D007362 5.8e-55 218.0 138 79.0
AT5G58575 Arabidopsis thaliana HOM05D005995 ORTHO05D007362 1.3e-54 216.9 172 61.6
PSO017G3188 Papaver somniferum HOM05D005995 ORTHO05D007362 1.7e-54 216.5 138 79.0
MD11G1066600 Malus domestica HOM05D005995 ORTHO05D007362 8.4e-54 214.2 180 64.4
CARHR272410 Cardamine hirsuta HOM05D005995 ORTHO05D007362 1.1e-53 213.8 173 62.4
TWI79G0924 Tripterygium wilfordii HOM05D005995 ORTHO05D007362 1.4e-53 213.4 185 62.7
Migut.N00147 Erythranthe guttata HOM05D005995 ORTHO05D007362 3.2e-53 212.2 177 64.4
CDE10G0962 Ceratophyllum demersum HOM05D005995 ORTHO05D007362 4.2e-53 211.8 164 70.7
HPP92_012020 Vanilla planifolia HOM05D005995 ORTHO05D007362 1.2e-52 210.3 181 64.1
MBI03_g03955_MAGBIO Magnolia biondii HOM05D005995 ORTHO05D007362 2.7e-52 209.1 177 64.4
HanXRQChr11g0334701 Helianthus annuus HOM05D005995 ORTHO05D007362 1.0e-51 207.2 132 77.3
THA.LOC104799390 Tarenaya hassleriana HOM05D005995 ORTHO05D007362 1.0e-51 207.2 181 60.2
ECA248G1932 Erigeron canadensis HOM05D005995 ORTHO05D007362 1.8e-51 206.5 138 74.6
Thhalv10014805m.g Eutrema salsugineum HOM05D005995 ORTHO05D007362 1.8e-51 206.5 172 61.0
Sc06g0010410 Simmondsia chinensis HOM05D005995 ORTHO05D007362 2.3e-51 206.1 137 76.6
MD11G1066800 Malus domestica HOM05D005995 ORTHO05D007362 1.1e-50 203.8 157 66.9
unitig_62.g23487 Utricularia gibba HOM05D005995 ORTHO05D007362 1.2e-47 193.7 177 63.3
Aa31LG11G350 Aethionema arabicum HOM05D005995 ORTHO05D007362 1.3e-46 190.3 144 66.7
BcaB01g04505 Brassica carinata HOM05D005995 ORTHO05D007362 2.2e-46 189.5 135 68.1
Lsat_1_v5_gn_5_173181 Lactuca sativa HOM05D005995 ORTHO05D007362 2.2e-46 189.5 132 73.5
BcaC01g06637 Brassica carinata HOM05D005995 ORTHO05D007362 2.9e-46 189.1 164 61.0
A03p12120 Brassica napus HOM05D005995 ORTHO05D007362 3.8e-46 188.7 159 60.4
BraA03t10524Z Brassica rapa HOM05D005995 ORTHO05D007362 3.8e-46 188.7 159 60.4
BolC3t13867H Brassica oleracea HOM05D005995 ORTHO05D007362 1.4e-45 186.8 159 59.7
Sed0014404 Sechium edule HOM05D005995 ORTHO05D007362 1.9e-45 186.4 162 61.7
Lj1P130T21 Lonicera japonica HOM05D005995 ORTHO05D007362 3.2e-45 185.7 107 86.0
MD11G1152800 Malus domestica HOM05D005995 ORTHO05D007362 7.9e-44 181.0 113 77.9
TWI31G1135 Tripterygium wilfordii HOM05D005995 ORTHO05D007362 3.0e-43 179.1 143 67.1
BcaNung06849 Brassica carinata HOM05D002227 ORTHO05D007362 1.1e-42 177.2 135 65.2
AUR62002337 Chenopodium quinoa HOM05D005995 ORTHO05D007362 2.2e-41 172.9 123 65.9
Mapoly0008s0254 Marchantia polymorpha HOM05D005995 ORTHO05D007362 2.8e-41 172.6 181 55.8
SEGI_16655 Sequoiadendron giganteum HOM05D005995 ORTHO05D007362 9.1e-40 167.5 175 53.1
Gohir.A05G107700 Gossypium hirsutum HOM05D005995 ORTHO05D007362 1.7e-38 163.3 177 52.5
Os05g0351500 Oryza sativa ssp. japonica HOM05D005995 ORTHO05D007362 3.6e-36 155.6 186 48.4
Gohir.D05G107900 Gossypium hirsutum HOM05D005995 ORTHO05D007362 3.9e-35 152.1 177 50.8
Zm00001eb286290 Zea mays HOM05D005995 ORTHO05D007362 3.9e-35 152.1 183 50.3
Pp3c7_14690 Physcomitrium patens HOM05D005995 ORTHO05D007362 2.6e-31 139.4 140 54.3
C03p14210 Brassica napus HOM05D005995 ORTHO05D007362 4.5e-31 138.7 113 59.3
BcaC01g06639 Brassica carinata HOM05D005995 ORTHO05D007362 4.4e-26 122.1 119 55.5
SMO358G0374 Selaginella moellendorffii HOM05D005995 ORTHO05D007362 2.2e-25 119.8 99 61.6
AagrBONN_evm.TU.Sc2ySwM_344.2127 Anthoceros agrestis HOM05D005995 ORTHO05D007362 3.1e-24 115.9 110 56.4
Pp3c11_11530 Physcomitrium patens HOM05D001687 ORTHO05D001608 4.1e-24 115.5 125 50.4
Gorai.009G112000 Gossypium raimondii HOM05D005995 ORTHO05D007362 3.5e-23 112.5 123 52.8
Actinidia32626 Actinidia chinensis HOM05D005995 ORTHO05D007362 4.5e-23 112.1 72 81.9
MD11G1153100 Malus domestica HOM05D005995 ORTHO05D007362 3.8e-22 109.0 80 67.5
HPP92_013780 Vanilla planifolia HOM05D005995 ORTHO05D007362 1.6e-20 103.6 85 63.5
CBR_g49952 Chara braunii HOM05D000019 ORTHO05D000002 4.4e-18 95.5 137 41.6
Nn2g14856 Nelumbo nucifera HOM05D005995 ORTHO05D007362 1.1e-16 90.9 60 76.7
MD11G1071300 Malus domestica HOM05D005995 ORTHO05D007362 7.0e-16 88.2 81 55.6
Cre17.g719550 Chlamydomonas reinhardtii HOM05D005995 ORTHO05D007362 3.0e-11 72.8 50 62.0
Pp3c4_14820 Physcomitrium patens HOM05D005995 ORTHO05D311899 2.0e-07 60.1 118 38.1
MD11G1071400 Malus domestica HOM05D005995 ORTHO05D007362 3.5e-07 59.3 43 74.4
Medtr6g460490 Medicago truncatula HOM05D005995 ORTHO05D007362 4.5e-07 58.9 35 77.1
MCO04G081 Micromonas commoda HOM05D005995 ORTHO05D007362 4.5e-07 58.9 121 37.2


User provided reference genes

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