Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g14057 Nelumbo nucifera HOM05D006439 ORTHO05D008152 0.0e+00 1884.4 964 100.0
GSVIVG01033817001 Vitis vinifera HOM05D006439 ORTHO05D008152 5.9e-279 964.5 1015 50.8
PSO384G3820 Papaver somniferum HOM05D006439 ORTHO05D008152 5.6e-277 958.0 968 55.6
CiPaw.09G010200 Carya illinoinensis HOM05D006439 ORTHO05D008152 5.0e-270 934.9 978 51.6
Hma1.2p1_0232F.1_g097640 Hydrangea macrophylla HOM05D006439 ORTHO05D008152 2.5e-269 932.6 976 51.5
Cfa016567 Carpinus fangiana HOM05D006439 ORTHO05D008152 7.3e-269 931.0 980 52.4
QL07p039851 Quercus lobata HOM05D006439 ORTHO05D008152 2.1e-268 929.5 985 51.5
Prupe.7G115000 Prunus persica HOM05D006439 ORTHO05D008152 1.7e-262 909.8 970 51.2
TWI74G0883 Tripterygium wilfordii HOM05D006439 ORTHO05D008152 2.3e-262 909.4 973 49.8
MD12G1021400 Malus domestica HOM05D006439 ORTHO05D008152 5.2e-259 898.3 971 49.7
Gorai.007G371000 Gossypium raimondii HOM05D006439 ORTHO05D008152 8.4e-257 891.0 982 49.8
Manes.08G022900 Manihot esculenta HOM05D006439 ORTHO05D008152 7.8e-255 884.4 983 49.8
FAN02G3052 Fragaria x ananassa HOM05D006439 ORTHO05D008152 3.9e-254 882.1 1047 47.8
Lalb_Chr01g0018261 Lupinus albus HOM05D006439 ORTHO05D008152 7.3e-253 877.9 980 47.9
Lj1g0012097 Lotus japonicus HOM05D006439 ORTHO05D008152 1.4e-248 863.6 975 47.5
TPR.G19544 Trifolium pratense HOM05D006439 ORTHO05D008152 1.9e-248 863.2 962 48.6
Psat3g034720 Pisum sativum HOM05D006439 ORTHO05D008152 3.2e-248 862.4 970 47.7
Medtr7g104170 Medicago truncatula HOM05D006439 ORTHO05D008152 4.3e-245 852.0 955 48.4
Phvul.001G188000 Phaseolus vulgaris HOM05D006439 ORTHO05D008152 1.8e-243 846.7 965 47.5
Glyma.03G192900 Glycine max HOM05D006439 ORTHO05D008152 3.1e-243 845.9 962 47.1
arahy.Tifrunner.gnm1.ann1.YQ8CLY Arachis hypogaea HOM05D006439 ORTHO05D008152 1.9e-240 836.6 996 46.5
Sopen10g035010 Solanum pennellii HOM05D006439 ORTHO05D008152 5.4e-240 835.1 975 47.3
Gohir.A11G321900 Gossypium hirsutum HOM05D006439 ORTHO05D008152 7.9e-239 831.2 920 49.6
arahy.Tifrunner.gnm1.ann1.JQB9X3 Arachis hypogaea HOM05D006439 ORTHO05D008152 9.6e-237 824.3 1002 45.6
Solyc10g085600.2 Solanum lycopersicum HOM05D006439 ORTHO05D008152 1.3e-236 823.9 975 46.9
FAN14G3294 Fragaria x ananassa HOM05D006439 ORTHO05D008152 1.5e-234 817.0 999 47.3
THA.LOC104823488 Tarenaya hassleriana HOM05D006439 ORTHO05D008152 1.1e-232 810.8 976 45.5
Duzib093G0471 Durio zibethinus HOM05D006439 ORTHO05D008152 3.9e-230 802.4 989 46.1
Migut.L01768 Erythranthe guttata HOM05D006439 ORTHO05D008152 4.3e-229 798.9 940 46.2
HanXRQChr09g0247281 Helianthus annuus HOM05D006439 ORTHO05D008152 2.6e-226 789.6 971 45.3
AL4G32530 Arabidopsis lyrata HOM05D006439 ORTHO05D008152 1.5e-221 773.9 973 44.9
Haze_19565 Corylus avellana HOM05D006439 ORTHO05D008152 1.6e-220 770.4 1013 45.7
Gohir.D11G340900 Gossypium hirsutum HOM05D006439 ORTHO05D008152 2.1e-220 770.0 858 49.9
AT2G36370 Arabidopsis thaliana HOM05D006439 ORTHO05D008152 8.2e-220 768.1 976 44.8
Actinidia31281 Actinidia chinensis HOM05D006439 ORTHO05D008152 1.1e-219 767.7 851 48.5
Sc07g0005420 Simmondsia chinensis HOM05D006439 ORTHO05D008152 1.8e-214 750.4 860 47.8
Cc06_g05440 Coffea canephora HOM05D006439 ORTHO05D008152 2.3e-214 750.0 916 45.3
CARHR130670 Cardamine hirsuta HOM05D006439 ORTHO05D008152 5.7e-213 745.3 962 43.1
SGA_v2.0_scaffold184G39949 Striga asiatica HOM05D006439 ORTHO05D008152 7.4e-213 745.0 1032 41.1
Peaxi162Scf00146g00718 Petunia axillaris HOM05D006439 ORTHO05D008152 1.8e-211 740.3 921 45.2
Thhalv10017885m.g Eutrema salsugineum HOM05D006439 ORTHO05D008152 1.2e-210 737.6 922 45.1
Aqoxy2G01352 Aquilegia oxysepala HOM05D006439 ORTHO05D008152 5.9e-210 735.3 660 57.7
BolC4t28018H Brassica oleracea HOM05D006439 ORTHO05D008152 5.9e-210 735.3 980 42.6
BcaC02g07604 Brassica carinata HOM05D006439 ORTHO05D008152 5.0e-209 732.3 957 43.1
ECA233G3232 Erigeron canadensis HOM05D006439 ORTHO05D008152 4.6e-207 725.7 942 43.9
BcaB06g28933 Brassica carinata HOM05D006439 ORTHO05D008152 5.1e-206 722.2 988 42.2
Oeu034357.1 Olea europaea HOM05D006439 ORTHO05D008152 2.8e-204 716.5 1001 42.1
A04p27880 Brassica napus HOM05D006439 ORTHO05D008152 6.3e-204 715.3 925 43.4
BraA04t18280Z Brassica rapa HOM05D006439 ORTHO05D008152 8.2e-204 714.9 927 43.3
Lsat_1_v5_gn_6_69500 Lactuca sativa HOM05D006439 ORTHO05D008152 1.8e-203 713.8 890 45.4
RcHm_v2.0_Chr3g0472491 Rosa chinensis HOM05D006439 ORTHO05D008152 1.3e-201 707.6 763 51.2
EL10Ac7g16960 Beta vulgaris HOM05D006439 ORTHO05D008152 2.4e-195 686.8 890 42.9
Os01g0968600 Oryza sativa ssp. japonica HOM05D006439 ORTHO05D008152 1.2e-194 684.5 940 41.9
Aa31LG5G21550 Aethionema arabicum HOM05D006439 ORTHO05D008152 9.4e-192 674.9 977 42.0
Cpa.g.sc5.59 Carica papaya HOM05D006439 ORTHO05D008152 1.2e-191 674.5 959 43.2
FvH4_6g18170 Fragaria vesca HOM05D006439 ORTHO05D008152 1.2e-191 674.5 965 41.2
Ca_08981_v3 Cicer arietinum L. HOM05D006439 ORTHO05D008152 8.2e-188 661.8 810 45.6
AUR62028585 Chenopodium quinoa HOM05D006439 ORTHO05D008152 9.4e-184 648.3 900 41.0
SalBow5G0766 Salvia bowleyana HOM05D006439 ORTHO05D008152 6.3e-180 635.6 801 44.1
CAN.G1099.9 Capsicum annuum HOM05D006439 ORTHO05D008152 9.1e-179 631.7 762 45.8
HPP92_005462 Vanilla planifolia HOM05D006439 ORTHO05D008152 1.2e-175 621.3 979 39.4
TAR623G1631 Trochodendron aralioides HOM05D006439 ORTHO05D008152 1.8e-174 617.5 534 60.9
Sp4g18660 Schrenkiella parvula HOM05D006439 ORTHO05D008152 2.8e-172 610.1 795 44.4
Ciclev10011131m.g Citrus clementina HOM05D006439 ORTHO05D008152 2.7e-170 603.6 762 45.9
PGR142G3529 Punica granatum HOM05D006439 ORTHO05D008152 3.4e-165 586.6 832 41.9
Thecc.05G084500 Theobroma cacao HOM05D006439 ORTHO05D008152 5.7e-165 585.9 655 49.9
vmacro08831 Vaccinium macrocarpon HOM05D006439 ORTHO05D008152 1.2e-159 568.2 661 48.1
VMungo1383G0775 Vigna mungo HOM05D006439 ORTHO05D008152 6.2e-159 565.8 676 47.5
Ah.15g091040 Amaranthus hybridus HOM05D006439 ORTHO05D008152 5.2e-158 562.8 838 39.6
Nitab4.5_0000381g0240 Nicotiana tabacum HOM05D006439 ORTHO05D008152 8.9e-158 562.0 831 40.9
DCAR_009146 Daucus carota HOM05D006439 ORTHO05D008152 2.8e-143 513.8 864 38.0
PSO801G0048 Papaver somniferum HOM05D006439 ORTHO05D008152 5.6e-136 489.6 787 39.3
Atru.chr8.1601 Acer truncatum HOM05D006439 ORTHO05D008152 3.8e-132 476.9 452 56.0
Atru.chr8.1600 Acer truncatum HOM05D006439 ORTHO05D008152 1.5e-128 464.9 492 50.8
Dinv21235 Davidia involucrata HOM05D000103 ORTHO05D008152 9.0e-118 429.1 408 56.4
Dinv21234 Davidia involucrata HOM05D006439 ORTHO05D008152 2.9e-116 424.1 406 54.7
MBI17_g23163_MAGBIO Magnolia biondii HOM05D006439 ORTHO05D008152 1.0e-113 415.6 810 37.2
Carub.0004s1817 Capsella rubella HOM05D006439 ORTHO05D008152 4.8e-111 406.8 447 49.7
Rhsim04G0133900 Rhododendron simsii HOM05D006439 ORTHO05D008152 3.5e-106 390.6 341 57.2
Zm00001eb139990 Zea mays HOM05D006439 ORTHO05D008152 2.6e-101 374.4 623 38.4
CSS0038647 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 6.9e-94 349.7 284 61.3
Pp3c16_1040 Physcomitrium patens HOM05D006439 ORTHO05D008152 2.0e-88 331.6 935 29.4
QL11p044009 Quercus lobata HOM05D006439 ORTHO05D009270 2.2e-87 328.2 554 39.2
Carub.0004s1816 Capsella rubella HOM05D006439 ORTHO05D008152 1.4e-83 315.5 414 41.8
Nitab4.5_0005447g0020 Nicotiana tabacum HOM05D006439 ORTHO05D008152 1.0e-81 309.3 496 39.1
Mapoly0116s0006 Marchantia polymorpha HOM05D006439 ORTHO05D008152 5.2e-73 280.4 941 25.6
Lj3A1001T30 Lonicera japonica HOM05D006439 ORTHO05D008152 3.8e-68 264.2 249 58.6
VMungo1383G1144 Vigna mungo HOM05D006439 ORTHO05D008152 1.2e-61 242.7 226 50.0
AagrBONN_evm.TU.Sc2ySwM_117.1948 Anthoceros agrestis HOM05D006439 ORTHO05D008152 4.7e-58 230.7 914 25.9
RcHm_v2.0_Chr3g0472501 Rosa chinensis HOM05D006439 ORTHO05D008152 8.9e-57 226.5 183 57.9
SMO238G0046 Selaginella moellendorffii HOM05D006439 ORTHO05D008152 4.4e-56 224.2 877 26.1
Ciclev10013912m.g Citrus clementina HOM05D006439 ORTHO05D008152 1.2e-53 216.1 172 61.0
QL07p039868 Quercus lobata HOM05D006439 ORTHO05D008152 1.3e-52 212.6 197 57.4
PGSC0003DMG402008399 Solanum tuberosum HOM05D006439 ORTHO05D008152 7.3e-51 206.8 171 57.3
Lj3A1001G26 Lonicera japonica HOM05D006439 ORTHO05D008152 1.9e-46 192.2 202 51.0
Aqoxy2G01351 Aquilegia oxysepala HOM05D006439 ORTHO05D008152 1.6e-45 189.1 181 52.5
Lj3A1001T29 Lonicera japonica HOM05D006439 ORTHO05D008152 1.8e-41 175.6 316 36.7
TAR623G0848 Trochodendron aralioides HOM05D006439 ORTHO05D008152 1.2e-40 172.9 105 71.4
SEGI_26522 Sequoiadendron giganteum HOM05D006439 ORTHO05D000001 1.3e-39 169.5 223 42.6
SEGI_37059 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 1.3e-31 142.9 154 48.1
Nitab4.5_0000381g0270 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.1e-29 135.6 123 52.8
CAN.G1099.8 Capsicum annuum HOM05D006439 ORTHO05D008152 6.0e-29 134.0 128 50.0
CSS0030357 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 6.6e-28 130.6 169 43.2
SEGI_31112 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 6.6e-28 130.6 256 33.2
AL4G34520 Arabidopsis lyrata HOM05D006439 ORTHO05D008152 1.4e-25 122.9 181 36.5
FAN09G3024 Fragaria x ananassa HOM05D006439 ORTHO05D008152 1.2e-24 119.8 158 39.9
VMungo1127G2301 Vigna mungo HOM05D006439 ORTHO05D008152 1.5e-24 119.4 191 39.8
AUR62028586 Chenopodium quinoa HOM05D006439 ORTHO05D008152 3.8e-23 114.8 95 52.6
Lj3A1001T31 Lonicera japonica HOM05D006439 ORTHO05D008152 1.4e-22 112.8 97 54.6
SEGI_02684 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 6.6e-20 104.0 102 49.0
Thecc.10G111400 Theobroma cacao HOM05D006439 ORTHO05D008152 2.4e-17 95.5 76 60.5
SEGI_31670 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 1.6e-13 82.8 120 40.0
AUR62033535 Chenopodium quinoa HOM05D006439 ORTHO05D008152 6.0e-13 80.9 60 56.7
CSS0035414 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 2.3e-12 79.0 65 53.8
ECA232G2349 Erigeron canadensis HOM05D006439 ORTHO05D008321 2.1e-10 72.4 66 53.0
AL4G34560 Arabidopsis lyrata HOM05D006439 ORTHO05D008152 3.6e-10 71.6 128 32.8
Lj1g0014420 Lotus japonicus HOM05D006439 ORTHO05D046803 4.5e-08 64.7 81 44.4
SEGI_01774 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 5.8e-08 64.3 67 49.3
CSS0006664 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 9.9e-08 63.5 60 55.0
Glyma.19G193000 Glycine max HOM05D006439 ORTHO05D046803 2.2e-07 62.4 74 47.3
Lj1g0023385 Lotus japonicus HOM05D006439 ORTHO05D008152 2.4e-06 58.9 51 54.9


User provided reference genes

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