Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g13545 Nelumbo nucifera HOM05D000276 ORTHO05D004685 2.6e-80 302.0 149 100.0
Nn1g00678 Nelumbo nucifera HOM05D000276 ORTHO05D004685 7.1e-38 161.0 227 48.9
Dinv37855 Davidia involucrata HOM05D000276 ORTHO05D004685 1.0e-36 157.1 227 47.6
Actinidia26018 Actinidia chinensis HOM05D000276 ORTHO05D004685 1.3e-36 156.8 227 47.6
Nn6g33706 Nelumbo nucifera HOM05D000276 ORTHO05D004685 1.3e-36 156.8 227 48.0
Nitab4.5_0010916g0010 Nicotiana tabacum HOM05D000276 ORTHO05D004685 1.3e-36 156.8 217 48.4
Manes.04G146500 Manihot esculenta HOM05D000276 ORTHO05D004685 3.0e-36 155.6 227 47.6
MD09G1179900 Malus domestica HOM05D000276 ORTHO05D004685 3.9e-36 155.2 227 46.7
Dinv20416 Davidia involucrata HOM05D000276 ORTHO05D004685 5.1e-36 154.8 227 46.7
CiPaw.02G134600 Carya illinoinensis HOM05D000276 ORTHO05D004685 6.6e-36 154.5 227 46.7
MD17G1165500 Malus domestica HOM05D000276 ORTHO05D004685 8.6e-36 154.1 227 46.3
QL05p003940 Quercus lobata HOM05D000276 ORTHO05D004685 8.6e-36 154.1 227 46.7
ATR0053G015 Amborella trichopoda HOM05D000276 ORTHO05D004685 1.1e-35 153.7 227 47.1
arahy.Tifrunner.gnm1.ann1.1W9MYV Arachis hypogaea HOM05D000276 ORTHO05D004685 1.1e-35 153.7 227 46.3
arahy.Tifrunner.gnm1.ann1.NTJB5Y Arachis hypogaea HOM05D000276 ORTHO05D004685 1.1e-35 153.7 227 46.3
Cfa003519 Carpinus fangiana HOM05D000276 ORTHO05D004685 1.5e-35 153.3 227 46.7
Cc06_g12310 Coffea canephora HOM05D000276 ORTHO05D004685 1.5e-35 153.3 227 46.3
CANSAT80G1285 Cannabis sativa HOM05D000276 ORTHO05D004685 1.9e-35 152.9 227 46.3
ClCG09G001080 Citrullus lanatus HOM05D000276 ORTHO05D004685 2.5e-35 152.5 227 45.8
Duzib168G2398 Durio zibethinus HOM05D000276 ORTHO05D004685 2.5e-35 152.5 227 46.3
Prupe.3G038700 Prunus persica HOM05D000276 ORTHO05D004685 2.5e-35 152.5 227 45.8
TAR383G0186 Trochodendron aralioides HOM05D000276 ORTHO05D004685 2.5e-35 152.5 227 46.3
Ca_02932_v3 Cicer arietinum L. HOM05D000276 ORTHO05D004685 3.3e-35 152.1 227 46.3
Duzib187G1428 Durio zibethinus HOM05D000276 ORTHO05D004685 3.3e-35 152.1 227 46.3
TWI23G0762 Tripterygium wilfordii HOM05D000276 ORTHO05D004685 3.3e-35 152.1 227 45.4
CiPaw.01G216900 Carya illinoinensis HOM05D000276 ORTHO05D004685 4.3e-35 151.8 227 46.3
Gohir.A06G077500 Gossypium hirsutum HOM05D000276 ORTHO05D004685 4.3e-35 151.8 227 47.1
Gohir.A13G189800 Gossypium hirsutum HOM05D000276 ORTHO05D004685 4.3e-35 151.8 227 45.8
Nitab4.5_0000073g0160 Nicotiana tabacum HOM05D000276 ORTHO05D004685 4.3e-35 151.8 227 45.8
PGR119G2314 Punica granatum HOM05D000276 ORTHO05D004685 4.3e-35 151.8 227 46.7
MSTRG.14320 Avicennia marina HOM05D000276 ORTHO05D004685 5.6e-35 151.4 227 45.8
Glyma.12G147200 Glycine max HOM05D000276 ORTHO05D004685 5.6e-35 151.4 227 46.7
Gohir.D06G076500 Gossypium hirsutum HOM05D000276 ORTHO05D004685 5.6e-35 151.4 227 46.3
Gorai.010G089600 Gossypium raimondii HOM05D000276 ORTHO05D004685 5.6e-35 151.4 228 45.6
Gorai.013G223200 Gossypium raimondii HOM05D000276 ORTHO05D004685 5.6e-35 151.4 228 45.2
Psat1g128160 Pisum sativum HOM05D000276 ORTHO05D004685 7.3e-35 151.0 227 46.3
VMungo1127G1993 Vigna mungo HOM05D000276 ORTHO05D004685 7.3e-35 151.0 227 46.3
COL.COLO4_18079 Corchorus olitorius HOM05D000276 ORTHO05D004685 9.5e-35 150.6 227 45.8
CSS0024147 Camellia sinensis var. sinensis HOM05D000276 ORTHO05D004685 1.2e-34 150.2 227 45.8
MELO3C024343.2 Cucumis melo HOM05D000276 ORTHO05D004685 1.2e-34 150.2 227 44.9
Duzib150G0912 Durio zibethinus HOM05D000276 ORTHO05D004685 1.2e-34 150.2 227 45.4
TWI14G0200 Tripterygium wilfordii HOM05D000276 ORTHO05D004685 1.2e-34 150.2 226 45.1
Peaxi162Scf00928g00131 Petunia axillaris HOM05D000276 ORTHO05D004685 1.6e-34 149.8 227 45.4
CAN.G1661.16 Capsicum annuum HOM05D000276 ORTHO05D004685 2.1e-34 149.4 227 45.4
CDE02G1693 Ceratophyllum demersum HOM05D000276 ORTHO05D004685 2.1e-34 149.4 227 45.4
Solyc12g009140.3 Solanum lycopersicum HOM05D000276 ORTHO05D004685 2.1e-34 149.4 227 45.4
PGSC0003DMG400002904 Solanum tuberosum HOM05D000276 ORTHO05D004685 2.1e-34 149.4 227 45.4
Aqoxy3G00422 Aquilegia oxysepala HOM05D000276 ORTHO05D004685 2.8e-34 149.1 227 45.4
CDE05G0959 Ceratophyllum demersum HOM05D000276 ORTHO05D004685 2.8e-34 149.1 227 45.4
Glyma.06G254200 Glycine max HOM05D000276 ORTHO05D004685 2.8e-34 149.1 227 45.8
Sed0020903 Sechium edule HOM05D000276 ORTHO05D004685 2.8e-34 149.1 227 44.9
MSTRG.15122 Avicennia marina HOM05D000276 ORTHO05D004685 3.6e-34 148.7 227 44.9
Migut.A01118 Erythranthe guttata HOM05D000276 ORTHO05D004685 3.6e-34 148.7 227 44.5
SGA_v2.0_scaffold34G13918 Striga asiatica HOM05D000276 ORTHO05D004685 4.7e-34 148.3 227 45.4
Eucgr.F04398 Eucalyptus grandis HOM05D000276 ORTHO05D004685 6.2e-34 147.9 227 45.8
Lj3g0028021 Lotus japonicus HOM05D000276 ORTHO05D004685 6.2e-34 147.9 227 45.8
EL10Ac8g19042 Beta vulgaris HOM05D000276 ORTHO05D004685 8.1e-34 147.5 207 47.3
CsaV3_7G034340 Cucumis sativus L. HOM05D000276 ORTHO05D004685 8.1e-34 147.5 227 44.1
Lj9A533G75 Lonicera japonica HOM05D000276 ORTHO05D004685 8.1e-34 147.5 227 45.4
Ciclev10026352m.g Citrus clementina HOM05D000276 ORTHO05D004685 1.1e-33 147.1 227 45.4
Lj5A34T27 Lonicera japonica HOM05D000276 ORTHO05D004685 1.1e-33 147.1 227 44.9
Thecc.09G074900 Theobroma cacao HOM05D000276 ORTHO05D004685 1.1e-33 147.1 227 44.9
unitig_37.g12874 Utricularia gibba HOM05D000276 ORTHO05D004685 1.1e-33 147.1 227 44.5
ClCG07G014530 Citrullus lanatus HOM05D000276 ORTHO05D004685 1.4e-33 146.7 227 45.4
Manes.03G041500 Manihot esculenta HOM05D000276 ORTHO05D004685 1.4e-33 146.7 227 45.8
Medtr2g060830 Medicago truncatula HOM05D000276 ORTHO05D004685 1.8e-33 146.4 227 44.9
Oeu007419.1 Olea europaea HOM05D000276 ORTHO05D004685 1.8e-33 146.4 227 44.9
Medtr8g464460 Medicago truncatula HOM05D000276 ORTHO05D004685 2.4e-33 146.0 227 44.1
Sed0004763 Sechium edule HOM05D000276 ORTHO05D004685 2.4e-33 146.0 227 44.5
Hund08823 Selenicereus undatus HOM05D000276 ORTHO05D004685 2.4e-33 146.0 227 44.9
Atru.chr7.1724 Acer truncatum HOM05D000276 ORTHO05D004685 3.1e-33 145.6 227 44.9
Sopen12g004090 Solanum pennellii HOM05D000276 ORTHO05D004685 3.1e-33 145.6 235 43.8
Ah.09g229270 Amaranthus hybridus HOM05D000276 ORTHO05D004685 5.2e-33 144.8 227 44.9
Phvul.011G155200 Phaseolus vulgaris HOM05D000276 ORTHO05D004685 5.2e-33 144.8 227 45.4
Potri.006G140400 Populus trichocarpa HOM05D000276 ORTHO05D004685 5.2e-33 144.8 227 45.4
TPR.G11723 Trifolium pratense HOM05D000276 ORTHO05D004685 5.2e-33 144.8 227 44.5
HanXRQChr04g0094541 Helianthus annuus HOM05D000276 ORTHO05D004685 6.8e-33 144.4 227 44.1
MBI13_g00707_MAGBIO Magnolia biondii HOM05D000276 ORTHO05D004685 6.8e-33 144.4 227 44.5
HPP92_016598 Vanilla planifolia HOM05D000276 ORTHO05D004685 6.8e-33 144.4 227 44.1
Ciclev10010323m.g Citrus clementina HOM05D000276 ORTHO05D004685 8.9e-33 144.1 216 45.8
Potri.006G110800 Populus trichocarpa HOM05D000276 ORTHO05D004685 8.9e-33 144.1 227 45.4
RcHm_v2.0_Chr2g0146201 Rosa chinensis HOM05D000276 ORTHO05D004685 1.2e-32 143.7 227 44.1
SalBow7G1398 Salvia bowleyana HOM05D000276 ORTHO05D004685 1.2e-32 143.7 227 44.9
Actinidia30231 Actinidia chinensis HOM05D000276 ORTHO05D004685 1.5e-32 143.3 227 44.1
Rhsim03G0226900 Rhododendron simsii HOM05D000276 ORTHO05D004685 1.5e-32 143.3 227 44.1
Lalb_Chr19g0134491 Lupinus albus HOM05D000276 ORTHO05D004685 2.6e-32 142.5 227 44.1
PSO135G0155 Papaver somniferum HOM05D000276 ORTHO05D004685 2.6e-32 142.5 227 44.1
PSO724G0707 Papaver somniferum HOM05D000276 ORTHO05D004685 2.6e-32 142.5 227 44.1
Sabra06G0109600 Salix brachista HOM05D000276 ORTHO05D004685 2.6e-32 142.5 230 44.3
SGA_v2.0_scaffold70G23476 Striga asiatica HOM05D000276 ORTHO05D004685 2.6e-32 142.5 237 43.0
Lsat_1_v5_gn_1_37980 Lactuca sativa HOM05D000276 ORTHO05D004685 3.4e-32 142.1 227 43.6
THA.LOC104808878 Tarenaya hassleriana HOM05D000276 ORTHO05D004685 3.4e-32 142.1 227 43.2
Aqoxy7G04096 Aquilegia oxysepala HOM05D000276 ORTHO05D004685 7.6e-32 141.0 227 43.6
THA.LOC104815341 Tarenaya hassleriana HOM05D000276 ORTHO05D004685 9.9e-32 140.6 227 42.7
ECA248G0714 Erigeron canadensis HOM05D000276 ORTHO05D004685 1.3e-31 140.2 227 43.2
Potri.016G139600 Populus trichocarpa HOM05D000276 ORTHO05D004685 1.3e-31 140.2 227 44.9
AUR62028267 Chenopodium quinoa HOM05D000276 ORTHO05D004685 1.7e-31 139.8 227 42.7
FvH4_6g35040 Fragaria vesca HOM05D000276 ORTHO05D004685 1.7e-31 139.8 227 43.2
THA.LOC104826597 Tarenaya hassleriana HOM05D000276 ORTHO05D004685 1.7e-31 139.8 227 42.3
vmacro06348 Vaccinium macrocarpon HOM05D000276 ORTHO05D004685 2.2e-31 139.4 227 42.7
Sabra06G0086100 Salix brachista HOM05D000276 ORTHO05D004685 2.9e-31 139.0 227 44.5
DCAR_016110 Daucus carota HOM05D000276 ORTHO05D004685 3.8e-31 138.7 227 41.9
AUR62025264 Chenopodium quinoa HOM05D000276 ORTHO05D004685 4.9e-31 138.3 227 42.3
Zm00001eb401790 Zea mays HOM05D000276 ORTHO05D004685 8.4e-31 137.5 227 42.3
Dinv42406 Davidia involucrata HOM05D000276 ORTHO05D004685 1.4e-30 136.7 181 50.3
BcaB06g26863 Brassica carinata HOM05D000276 ORTHO05D004685 1.9e-30 136.3 227 41.4
BcaC06g35940 Brassica carinata HOM05D000276 ORTHO05D004685 1.9e-30 136.3 227 41.4
A07p06390 Brassica napus HOM05D000276 ORTHO05D004685 1.9e-30 136.3 227 41.4
C07p09530 Brassica napus HOM05D000276 ORTHO05D004685 1.9e-30 136.3 227 41.4
BolC7t41382H Brassica oleracea HOM05D000276 ORTHO05D004685 1.9e-30 136.3 227 41.4
CARHR103470 Cardamine hirsuta HOM05D000276 ORTHO05D004685 1.9e-30 136.3 227 41.4
Thhalv10002649m.g Eutrema salsugineum HOM05D000276 ORTHO05D004685 1.9e-30 136.3 227 41.4
FAN05G1250 Fragaria x ananassa HOM05D000276 ORTHO05D004685 1.9e-30 136.3 240 41.2
FAN09G1096 Fragaria x ananassa HOM05D000276 ORTHO05D004685 1.9e-30 136.3 240 41.2
Sp3g24290 Schrenkiella parvula HOM05D000276 ORTHO05D004685 1.9e-30 136.3 227 41.4
AL3G43370 Arabidopsis lyrata HOM05D000276 ORTHO05D004685 2.4e-30 136.0 227 41.4
AT2G05840 Arabidopsis thaliana HOM05D000276 ORTHO05D004685 2.4e-30 136.0 227 41.4
C03p55710 Brassica napus HOM05D000276 ORTHO05D004685 2.4e-30 136.0 225 41.3
BcaB08g34519 Brassica carinata HOM05D000276 ORTHO05D004685 3.2e-30 135.6 227 41.0
Pp3c23_21850 Physcomitrium patens HOM05D000276 ORTHO05D004685 3.2e-30 135.6 207 44.9
BcaC01g03135 Brassica carinata HOM05D000276 ORTHO05D004685 4.1e-30 135.2 227 41.0
Carub.0007s3134 Capsella rubella HOM05D000276 ORTHO05D004685 4.1e-30 135.2 227 41.0
Haze_16048 Corylus avellana HOM05D002249 ORTHO05D004685 4.1e-30 135.2 195 47.7
Os03g0180400 Oryza sativa ssp. japonica HOM05D000276 ORTHO05D004685 5.4e-30 134.8 227 41.4
Zm00001eb005960 Zea mays HOM05D000276 ORTHO05D004685 9.2e-30 134.0 227 41.0
FAN02G3049 Fragaria x ananassa HOM05D000276 ORTHO05D004685 1.2e-29 133.7 240 40.8
Oeu000283.1 Olea europaea HOM05D000276 ORTHO05D004685 1.6e-29 133.3 276 37.0
Atru.chr1.4042 Acer truncatum HOM05D000276 ORTHO05D004685 2.1e-29 132.9 230 43.0
AT5G35590 Arabidopsis thaliana HOM05D000276 ORTHO05D004685 2.1e-29 132.9 227 40.5
Hma1.2p1_0291F.1_g114895 Hydrangea macrophylla HOM05D000276 ORTHO05D004685 2.1e-29 132.9 228 43.9
AL7G44410 Arabidopsis lyrata HOM05D000276 ORTHO05D004685 2.7e-29 132.5 227 40.5
BraA07t28432Z Brassica rapa HOM05D000276 ORTHO05D004685 3.5e-29 132.1 238 39.5
DCAR_004565 Daucus carota HOM05D002718 ORTHO05D003269 3.5e-29 132.1 225 40.4
Pp3c8_24770 Physcomitrium patens HOM05D000276 ORTHO05D004685 4.6e-29 131.7 227 42.3
GSVIVG01016731001 Vitis vinifera HOM05D000276 ORTHO05D004685 4.6e-29 131.7 181 48.1
A03p44820 Brassica napus HOM05D000276 ORTHO05D004685 1.0e-28 130.6 244 38.5
Sc18g0002660 Simmondsia chinensis HOM05D000276 ORTHO05D004685 1.0e-28 130.6 181 48.1
BolC3t17851H Brassica oleracea HOM05D000276 ORTHO05D004685 3.0e-28 129.0 244 38.1
Pp3c24_20680 Physcomitrium patens HOM05D000276 ORTHO05D004685 5.1e-28 128.3 227 42.3
Actinidia24720 Actinidia chinensis HOM05D000633 ORTHO05D004685 6.6e-28 127.9 178 48.3
AagrBONN_evm.TU.Sc2ySwM_117.2618 Anthoceros agrestis HOM05D000276 ORTHO05D004685 3.3e-27 125.6 227 39.6
FAN14G5418 Fragaria x ananassa HOM05D000276 ORTHO05D004685 7.3e-27 124.4 267 36.7
BraA03t13619Z Brassica rapa HOM05D000276 ORTHO05D004685 1.2e-26 123.6 258 36.0
Mapoly0006s0307 Marchantia polymorpha HOM05D000276 ORTHO05D004685 6.2e-26 121.3 227 38.8
SMO348G0074 Selaginella moellendorffii HOM05D000276 ORTHO05D004685 2.0e-24 116.3 227 38.8
Hma1.2p1_0686F.1_g203320 Hydrangea macrophylla HOM05D000276 ORTHO05D004685 3.4e-24 115.5 228 38.2
Hma1.2p1_2485F.1_g323070 Hydrangea macrophylla HOM05D000276 ORTHO05D004685 3.4e-24 115.5 228 38.2
SHI46741 Sapria himalayana HOM05D000276 ORTHO05D004685 5.4e-22 108.2 213 36.6
Hund26042 Selenicereus undatus HOM05D000276 ORTHO05D004685 6.0e-21 104.8 291 34.4
Pp3c7_22140 Physcomitrium patens HOM05D000276 ORTHO05D004685 2.3e-20 102.8 181 38.7
CBR_g23123 Chara braunii HOM05D000276 ORTHO05D004685 2.5e-19 99.4 218 35.3
Cre17.g705400 Chlamydomonas reinhardtii HOM05D000276 ORTHO05D004685 4.3e-19 98.6 230 33.0
Psat4g153680 Pisum sativum HOM05D000276 ORTHO05D004685 1.3e-18 97.1 110 52.7
Aa31sc209G60 Aethionema arabicum HOM05D000276 ORTHO05D004685 2.8e-18 95.9 262 32.4
PRCOL_00000811 Prasinoderma coloniale HOM05D000276 ORTHO05D004685 8.4e-15 84.3 117 44.4
Psat1g135520 Pisum sativum HOM05D001129 ORTHO05D037357 1.9e-14 83.2 96 49.0
Lalb_Chr01g0006411 Lupinus albus HOM05D000276 ORTHO05D004685 2.4e-14 82.8 103 50.5
Lsat_1_v5_gn_7_53201 Lactuca sativa HOM05D000276 ORTHO05D004685 1.2e-13 80.5 100 46.0
Actinidia39648 Actinidia chinensis HOM05D000276 ORTHO05D004685 1.6e-13 80.1 133 39.1
MCO09G066 Micromonas commoda HOM05D000276 ORTHO05D004685 7.9e-13 77.8 219 32.4
ECA247G3129 Erigeron canadensis HOM05D000276 ORTHO05D004685 1.0e-12 77.4 133 39.8
AagrBONN_evm.TU.Sc2ySwM_117.2612 Anthoceros agrestis HOM05D000276 ORTHO05D004685 1.8e-12 76.6 136 38.2
Zm00001eb327410 Zea mays HOM05D000276 ORTHO05D004685 3.0e-12 75.9 256 28.9
Os07g0614100 Oryza sativa ssp. japonica HOM05D000276 ORTHO05D004685 2.1e-10 69.7 113 39.8
SEGI_07422 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 3.1e-09 65.9 79 50.6
TPR.G14116 Trifolium pratense HOM05D000276 ORTHO05D004685 9.0e-09 64.3 70 57.1
Psat0s3737g0120 Pisum sativum HOM05D000276 ORTHO05D037357 4.5e-08 62.0 71 46.5
Psat2g031080 Pisum sativum HOM05D000276 ORTHO05D037357 3.8e-07 58.9 33 72.7
TPR.G506 Trifolium pratense HOM05D000276 ORTHO05D004685 1.1e-06 57.4 30 80.0
Lalb_Chr01g0006421 Lupinus albus HOM05D000276 ORTHO05D004685 2.4e-06 56.2 83 42.2


User provided reference genes

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