Gene: Lsat_1_v5_gn_1_37980

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_1_37980
  • Transcript Identifier Lsat_1_v5_gn_1_37980.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_1 : 43786844-43788402 : negative

Gene Family Information

  • ID HOM05D000276
  • #Genes/#Species 1584/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_1_37980.v5
  • pacid 38944786

Descriptions

  • Description K02730 - 20S proteasome subunit alpha 1 (PSMA6)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006511
IEA
InterProubiquitin-dependent protein catabolic process
GO:0051603
IEA
InterProproteolysis involved in cellular protein catabolic process
GO:0010043
ISO
PLAZA Integrative Orthologyresponse to zinc ion Zm00001eb005960
GO:0046688
ISO
PLAZA Integrative Orthologyresponse to copper ion Zm00001eb005960
GO:0032025
ISO
PLAZA Integrative Orthologyresponse to cobalt ion Zm00001eb005960
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion Zm00001eb005960
GO:0010045
ISO
PLAZA Integrative Orthologyresponse to nickel cation Zm00001eb005960

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
ISO
PLAZA Integrative Orthologystructural constituent of ribosome AT2G05840

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019773
IEA
InterProproteasome core complex, alpha-subunit complex
GO:0005839
IEA
InterProproteasome core complex
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT2G05840
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G35590
GO:0000502
ISO
PLAZA Integrative Orthologyproteasome complex AT2G05840
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT5G35590
GO:0042788
ISO
PLAZA Integrative Orthologypolysomal ribosome AT2G05840

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000426 Proteasome alpha-subunit, N-terminal domain
IPR001353 Proteasome, subunit alpha/beta
IPR029055 Nucleophile aminohydrolases, N-terminal
IPR034642 Proteasome subunit alpha6
Mapman id Description
19.2.5.1.1.1 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.20S core particle.alpha-type components.component alpha type-1