Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g13462 Nelumbo nucifera HOM05D006605 ORTHO05D008277 1.4e-38 163.3 145 100.0
Cc02_g07470 Coffea canephora HOM05D006605 ORTHO05D008277 6.0e-34 147.9 144 94.4
Gohir.D10G234300 Gossypium hirsutum HOM05D006605 ORTHO05D008277 6.0e-34 147.9 144 91.0
Gorai.011G267900 Gossypium raimondii HOM05D006605 ORTHO05D008277 7.9e-34 147.5 144 90.3
VMungo1383G1515 Vigna mungo HOM05D006605 ORTHO05D008277 1.3e-33 146.7 144 94.4
COL.COLO4_25481 Corchorus olitorius HOM05D006605 ORTHO05D008277 1.8e-33 146.4 144 90.3
Duzib106G0051 Durio zibethinus HOM05D006605 ORTHO05D008277 1.8e-33 146.4 144 94.4
Potri.010G200000 Populus trichocarpa HOM05D006605 ORTHO05D008277 1.8e-33 146.4 144 94.4
GSVIVG01016495001 Vitis vinifera HOM05D006605 ORTHO05D008277 2.3e-33 146.0 144 94.4
arahy.Tifrunner.gnm1.ann1.SDQ61V Arachis hypogaea HOM05D006605 ORTHO05D008277 3.0e-33 145.6 144 93.8
arahy.Tifrunner.gnm1.ann1.SV7RC5 Arachis hypogaea HOM05D006605 ORTHO05D008277 3.0e-33 145.6 144 93.8
PGR142G0607 Punica granatum HOM05D006605 ORTHO05D008277 3.0e-33 145.6 144 94.4
Thecc.10G038800 Theobroma cacao HOM05D006605 ORTHO05D008277 3.0e-33 145.6 144 93.1
Glyma.18G035300 Glycine max HOM05D006605 ORTHO05D008277 5.1e-33 144.8 144 93.8
Potri.008G058800 Populus trichocarpa HOM05D006605 ORTHO05D008277 6.7e-33 144.4 144 91.7
Aqoxy2G02333 Aquilegia oxysepala HOM05D006605 ORTHO05D008277 8.7e-33 144.1 144 90.3
Glyma.11G222100 Glycine max HOM05D006605 ORTHO05D008277 8.7e-33 144.1 144 93.8
Gohir.A10G222000 Gossypium hirsutum HOM05D006605 ORTHO05D008277 8.7e-33 144.1 144 89.6
QL08p061156 Quercus lobata HOM05D006605 ORTHO05D008277 8.7e-33 144.1 143 84.6
Sc14g0004650 Simmondsia chinensis HOM05D006605 ORTHO05D008277 1.1e-32 143.7 144 85.4
Lalb_Chr18g0053081 Lupinus albus HOM05D006605 ORTHO05D008277 1.5e-32 143.3 144 93.8
Sed0013536 Sechium edule HOM05D006605 ORTHO05D008277 1.5e-32 143.3 144 93.8
MD07G1203100 Malus domestica HOM05D006605 ORTHO05D008277 1.9e-32 142.9 144 92.4
Phvul.001G235600 Phaseolus vulgaris HOM05D006605 ORTHO05D008277 1.9e-32 142.9 144 92.4
Cpa.g.sc19.283 Carica papaya HOM05D006605 ORTHO05D008277 2.5e-32 142.5 140 95.7
Eucgr.G02956 Eucalyptus grandis HOM05D006605 ORTHO05D008277 3.3e-32 142.1 144 91.0
THA.LOC104810044 Tarenaya hassleriana HOM05D006605 ORTHO05D008277 3.3e-32 142.1 144 91.0
Migut.F00754 Erythranthe guttata HOM05D006605 ORTHO05D008277 4.3e-32 141.7 144 84.7
CiPaw.02G186200 Carya illinoinensis HOM05D006605 ORTHO05D008277 5.6e-32 141.4 144 90.3
ClCG11G006700 Citrullus lanatus HOM05D006605 ORTHO05D008277 5.6e-32 141.4 142 93.0
CsaV3_6G001320 Cucumis sativus L. HOM05D006605 ORTHO05D008277 5.6e-32 141.4 142 93.0
DCAR_011727 Daucus carota HOM05D006605 ORTHO05D008277 5.6e-32 141.4 144 85.4
HanXRQChr08g0221071 Helianthus annuus HOM05D006605 ORTHO05D008277 5.6e-32 141.4 144 91.0
Manes.07G118800 Manihot esculenta HOM05D006605 ORTHO05D008277 9.6e-32 140.6 142 93.7
MELO3C008233.2 Cucumis melo HOM05D006605 ORTHO05D008277 1.3e-31 140.2 142 90.8
Hma1.2p1_0039F.1_g024420 Hydrangea macrophylla HOM05D006605 ORTHO05D008277 1.6e-31 139.8 143 89.5
Prupe.2G239300 Prunus persica HOM05D006605 ORTHO05D008277 1.6e-31 139.8 144 81.9
Ca_08185_v3 Cicer arietinum L. HOM05D006605 ORTHO05D008277 2.8e-31 139.0 144 91.0
Hund13792 Selenicereus undatus HOM05D006605 ORTHO05D008277 2.8e-31 139.0 144 88.9
Oeu001504.1 Olea europaea HOM05D006605 ORTHO05D008277 4.8e-31 138.3 144 91.0
EL10Ac2g04706 Beta vulgaris HOM05D006605 ORTHO05D008277 6.2e-31 137.9 144 86.8
Peaxi162Scf00736g00213 Petunia axillaris HOM05D006605 ORTHO05D008277 1.4e-30 136.7 144 91.0
CANSAT56G0196 Cannabis sativa HOM05D006605 ORTHO05D008277 2.4e-30 136.0 144 90.3
TWI15G0193 Tripterygium wilfordii HOM05D006605 ORTHO05D008277 2.4e-30 136.0 144 89.6
RcHm_v2.0_Chr1g0368241 Rosa chinensis HOM05D006605 ORTHO05D008277 3.1e-30 135.6 142 88.0
unitig_747.g21792 Utricularia gibba HOM05D006605 ORTHO05D008277 3.1e-30 135.6 146 79.5
Nitab4.5_0000120g0080 Nicotiana tabacum HOM05D006605 ORTHO05D008277 4.0e-30 135.2 144 80.6
TPR.G2861 Trifolium pratense HOM05D006605 ORTHO05D008277 4.0e-30 135.2 144 90.3
Medtr3g068150 Medicago truncatula HOM05D006605 ORTHO05D008277 5.3e-30 134.8 144 88.9
Sopen06g032890 Solanum pennellii HOM05D006605 ORTHO05D008277 5.3e-30 134.8 144 88.2
PGSC0003DMG400034939 Solanum tuberosum HOM05D006605 ORTHO05D008277 5.3e-30 134.8 144 88.2
Actinidia02925 Actinidia chinensis HOM05D006605 ORTHO05D008277 6.9e-30 134.4 144 88.9
FvH4_7g23000 Fragaria vesca HOM05D006605 ORTHO05D008277 9.0e-30 134.0 142 85.9
FAN01G2186 Fragaria x ananassa HOM05D006605 ORTHO05D008277 9.0e-30 134.0 142 85.9
FAN06G3081 Fragaria x ananassa HOM05D006605 ORTHO05D008277 9.0e-30 134.0 142 85.9
FAN06G4444 Fragaria x ananassa HOM05D006605 ORTHO05D008277 9.0e-30 134.0 142 85.9
CAN.G394.84 Capsicum annuum HOM05D006605 ORTHO05D008277 1.5e-29 133.3 144 90.3
Lsat_1_v5_gn_8_14921 Lactuca sativa HOM05D006605 ORTHO05D008277 2.0e-29 132.9 144 88.2
Rhsim03G0134500 Rhododendron simsii HOM05D006605 ORTHO05D008277 2.6e-29 132.5 144 86.1
ATR0559G079 Amborella trichopoda HOM05D006605 ORTHO05D008277 3.4e-29 132.1 144 90.3
Nitab4.5_0002872g0060 Nicotiana tabacum HOM05D006605 ORTHO05D008277 4.5e-29 131.7 144 73.6
Hund16063 Selenicereus undatus HOM05D006605 ORTHO05D008277 4.5e-29 131.7 152 72.4
Dinv03376 Davidia involucrata HOM05D006605 ORTHO05D008277 9.9e-29 130.6 153 85.0
TAR636G1277 Trochodendron aralioides HOM05D006605 ORTHO05D008277 2.9e-28 129.0 144 87.5
MBI05_g35187_MAGBIO Magnolia biondii HOM05D006605 ORTHO05D008277 3.8e-28 128.6 144 88.9
MSTRG.27369 Avicennia marina HOM05D006605 ORTHO05D008277 8.4e-28 127.5 144 84.7
Os01g0144100 Oryza sativa ssp. japonica HOM05D006605 ORTHO05D008277 1.4e-27 126.7 144 81.2
AagrBONN_evm.TU.Sc2ySwM_117.3127 Anthoceros agrestis HOM05D006605 ORTHO05D008277 7.1e-27 124.4 142 84.5
Lj6g0021847 Lotus japonicus HOM05D006605 ORTHO05D008277 9.3e-27 124.0 144 86.1
FAN03G2768 Fragaria x ananassa HOM05D006605 ORTHO05D008277 1.6e-26 123.2 163 57.7
HPP92_019456 Vanilla planifolia HOM05D006605 ORTHO05D008277 1.6e-26 123.2 144 84.7
PSO339G4488 Papaver somniferum HOM05D006605 ORTHO05D008277 3.5e-26 122.1 144 81.9
PSO513G0127 Papaver somniferum HOM05D006605 ORTHO05D008277 4.6e-26 121.7 144 81.9
ECA233G2444 Erigeron canadensis HOM05D006605 ORTHO05D008277 6.0e-26 121.3 136 80.1
Mapoly0057s0063 Marchantia polymorpha HOM05D006605 ORTHO05D008277 8.7e-25 117.5 142 74.6
Ah.16g102590 Amaranthus hybridus HOM05D006605 ORTHO05D008277 1.5e-24 116.7 127 89.8
AT2G44920 Arabidopsis thaliana HOM05D006605 ORTHO05D008277 7.4e-24 114.4 144 80.6
CDE09G0303 Ceratophyllum demersum HOM05D006605 ORTHO05D008277 4.8e-23 111.7 142 84.5
Haze_17112 Corylus avellana HOM05D006605 ORTHO05D008277 8.2e-23 110.9 141 87.2
CARHR140160 Cardamine hirsuta HOM05D006605 ORTHO05D008277 1.4e-22 110.2 144 79.2
AUR62012132 Chenopodium quinoa HOM05D006605 ORTHO05D008277 3.1e-22 109.0 130 90.0
Pp3c11_10480 Physcomitrium patens HOM05D006605 ORTHO05D008277 6.9e-22 107.8 142 70.4
FAN01G0046 Fragaria x ananassa HOM05D006605 ORTHO05D008277 3.4e-21 105.5 125 87.2
Dinv06756 Davidia involucrata HOM05D006605 ORTHO05D008277 4.5e-21 105.1 50 96.0
SMO364G0932 Selaginella moellendorffii HOM05D006605 ORTHO05D008277 2.2e-20 102.8 142 72.5
SEGI_08946 Sequoiadendron giganteum HOM05D006605 ORTHO05D008277 2.2e-20 102.8 56 82.1
Atru.BG.275.p Acer truncatum HOM05D006605 ORTHO05D008277 3.8e-20 102.1 126 90.5
CBR_g37590 Chara braunii HOM05D006605 ORTHO05D008277 6.5e-20 101.3 142 72.5
Aa31LG1G26470 Aethionema arabicum HOM05D006605 ORTHO05D008277 1.4e-19 100.1 129 81.4
BcaC02g12262 Brassica carinata HOM05D006605 ORTHO05D008277 5.5e-19 98.2 144 74.3
C04p05870 Brassica napus HOM05D006605 ORTHO05D008277 5.5e-19 98.2 144 74.3
BolC4t22217H Brassica oleracea HOM05D006605 ORTHO05D008277 5.5e-19 98.2 144 74.3
Sp4g26990 Schrenkiella parvula HOM05D006605 ORTHO05D008277 1.5e-16 90.1 144 72.9
BcaB02g08862 Brassica carinata HOM05D006605 ORTHO05D008277 2.5e-16 89.4 144 71.5
A05p05030 Brassica napus HOM05D006605 ORTHO05D008277 5.7e-16 88.2 144 70.8
BraA05t19477Z Brassica rapa HOM05D006605 ORTHO05D008277 5.7e-16 88.2 144 70.8
Carub.0004s2751 Capsella rubella HOM05D006605 ORTHO05D008277 1.6e-15 86.7 144 70.1
AL4G44020 Arabidopsis lyrata HOM05D006605 ORTHO05D008277 1.4e-14 83.6 145 71.7
AUR62040704 Chenopodium quinoa HOM05D006605 ORTHO05D008277 2.0e-13 79.7 38 94.7
vmacro07051 Vaccinium macrocarpon HOM05D006605 ORTHO05D008277 3.4e-13 79.0 38 89.5
Thhalv10001625m.g Eutrema salsugineum HOM05D006605 ORTHO05D008277 5.9e-13 78.2 144 69.4
Sabra10G0154200 Salix brachista HOM05D006605 ORTHO05D008277 1.3e-12 77.0 153 51.0
Zm00001eb335810 Zea mays HOM05D006605 ORTHO05D008277 1.7e-12 76.6 140 75.0
SGA_v2.0_scaffold389G50578 Striga asiatica HOM05D006605 ORTHO05D008277 2.1e-10 69.7 35 85.7
Lj8C79T16 Lonicera japonica HOM05D006605 ORTHO05D008277 4.6e-10 68.6 106 85.8
CDE02G3683 Ceratophyllum demersum HOM05D006605 ORTHO05D008277 7.9e-10 67.8 37 83.8
Ciclev10032666m.g Citrus clementina HOM05D006605 ORTHO05D008277 1.3e-07 60.5 29 93.1
Oeu031356.1 Olea europaea HOM05D006605 ORTHO05D008277 1.7e-07 60.1 37 70.3
Hma1.2p1_0039F.1_g024430 Hydrangea macrophylla HOM05D006605 ORTHO05D008277 3.7e-07 58.9 29 89.7
Cre16.g687300 Chlamydomonas reinhardtii HOM05D006605 ORTHO05D008277 4.8e-07 58.5 56 50.0
CSS0025701 Camellia sinensis var. sinensis HOM05D006605 ORTHO05D008277 1.1e-06 57.4 29 86.2
Dinv03373 Davidia involucrata HOM05D006605 ORTHO05D008277 1.1e-06 57.4 29 89.7
Dinv06757 Davidia involucrata HOM05D006605 ORTHO05D008277 1.1e-06 57.4 29 89.7
SEGI_09593 Sequoiadendron giganteum HOM05D006605 ORTHO05D008277 3.1e-06 55.8 29 82.8
Psat5g124720 Pisum sativum HOM05D006605 ORTHO05D008277 4.1e-06 55.5 29 86.2


User provided reference genes

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