Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g11345 Nelumbo nucifera HOM05D005750 ORTHO05D007126 1.4e-44 182.6 89 100.0
Actinidia13787 Actinidia chinensis HOM05D005750 ORTHO05D007126 2.0e-24 115.5 54 100.0
Aqoxy1G00732 Aquilegia oxysepala HOM05D005750 ORTHO05D007126 2.0e-24 115.5 54 100.0
Dinv35517 Davidia involucrata HOM05D005750 ORTHO05D007126 2.0e-24 115.5 54 100.0
Dinv37089 Davidia involucrata HOM05D005750 ORTHO05D007126 2.0e-24 115.5 54 100.0
vmacro20231 Vaccinium macrocarpon HOM05D005750 ORTHO05D007126 2.0e-24 115.5 54 100.0
COL.COLO4_14617 Corchorus olitorius HOM05D005750 ORTHO05D007126 1.0e-23 113.2 59 93.2
Hma1.2p1_0763F.1_g214560 Hydrangea macrophylla HOM05D005750 ORTHO05D007126 1.0e-23 113.2 54 96.3
Glyma.01G110900 Glycine max HOM05D005750 ORTHO05D007126 1.3e-23 112.8 59 91.5
MBI14_g32934_MAGBIO Magnolia biondii HOM05D005750 ORTHO05D007126 1.7e-23 112.5 53 98.1
MD04G1146200 Malus domestica HOM05D005750 ORTHO05D007126 1.7e-23 112.5 54 98.1
MD12G1159400 Malus domestica HOM05D005750 ORTHO05D007126 1.7e-23 112.5 54 98.1
Prupe.6G269800 Prunus persica HOM05D005750 ORTHO05D007126 1.7e-23 112.5 54 98.1
QL07p036167 Quercus lobata HOM05D005750 ORTHO05D007126 1.7e-23 112.5 54 98.1
Sed0027096 Sechium edule HOM05D005750 ORTHO05D007126 1.7e-23 112.5 54 98.1
TAR402G0002 Trochodendron aralioides HOM05D005750 ORTHO05D007126 1.7e-23 112.5 54 98.1
VMungo0331G1407 Vigna mungo HOM05D005750 ORTHO05D007126 1.7e-23 112.5 56 94.6
EL10Ac5g11550 Beta vulgaris HOM05D005750 ORTHO05D007126 2.2e-23 112.1 54 96.3
arahy.Tifrunner.gnm1.ann1.2Q187C Arachis hypogaea HOM05D005750 ORTHO05D007126 2.9e-23 111.7 56 92.9
arahy.Tifrunner.gnm1.ann1.CU0EG8 Arachis hypogaea HOM05D005750 ORTHO05D007126 2.9e-23 111.7 56 92.9
CSS0046643 Camellia sinensis var. sinensis HOM05D005750 ORTHO05D007126 2.9e-23 111.7 54 96.3
Cc06_g01740 Coffea canephora HOM05D005750 ORTHO05D007126 3.8e-23 111.3 54 96.3
Eucgr.B02764 Eucalyptus grandis HOM05D005750 ORTHO05D007126 3.8e-23 111.3 54 96.3
Phvul.010G008000 Phaseolus vulgaris HOM05D005750 ORTHO05D007126 3.8e-23 111.3 56 92.9
Rhsim05G0204700 Rhododendron simsii HOM05D005750 ORTHO05D007126 3.8e-23 111.3 54 96.3
DCAR_028833 Daucus carota HOM05D005750 ORTHO05D007126 5.0e-23 110.9 54 96.3
FvH4_6g12170 Fragaria vesca HOM05D005750 ORTHO05D007126 5.0e-23 110.9 54 96.3
FAN02G3889 Fragaria x ananassa HOM05D005750 ORTHO05D007126 5.0e-23 110.9 54 96.3
FAN09G4178 Fragaria x ananassa HOM05D005750 ORTHO05D007126 5.0e-23 110.9 54 96.3
FAN14G0046 Fragaria x ananassa HOM05D005750 ORTHO05D007126 5.0e-23 110.9 54 96.3
FAN14G1750 Fragaria x ananassa HOM05D005750 ORTHO05D007126 5.0e-23 110.9 54 96.3
PGR031G0365 Punica granatum HOM05D005750 ORTHO05D007126 5.0e-23 110.9 54 96.3
RcHm_v2.0_Chr3g0463971 Rosa chinensis HOM05D005750 ORTHO05D007126 5.0e-23 110.9 54 96.3
TWI74G1070 Tripterygium wilfordii HOM05D005750 ORTHO05D007126 5.0e-23 110.9 54 96.3
Duzib128G1738 Durio zibethinus HOM05D005750 ORTHO05D007126 6.5e-23 110.5 63 87.3
Glyma.03G076500 Glycine max HOM05D005750 ORTHO05D007126 6.5e-23 110.5 55 94.5
Lj2A78G34 Lonicera japonica HOM05D005750 ORTHO05D007126 6.5e-23 110.5 54 96.3
TPR.G5219 Trifolium pratense HOM05D005750 ORTHO05D007126 6.5e-23 110.5 54 96.3
CiPaw.09G205200 Carya illinoinensis HOM05D005750 ORTHO05D007126 8.5e-23 110.2 54 94.4
AUR62042943 Chenopodium quinoa HOM05D005750 ORTHO05D007126 8.5e-23 110.2 54 94.4
Gohir.A01G224900 Gossypium hirsutum HOM05D005750 ORTHO05D007126 8.5e-23 110.2 54 96.3
Gohir.D01G214500 Gossypium hirsutum HOM05D005750 ORTHO05D007126 8.5e-23 110.2 54 96.3
HanXRQChr16g0510541 Helianthus annuus HOM05D005750 ORTHO05D007126 8.5e-23 110.2 54 94.4
Thecc.05G023200 Theobroma cacao HOM05D005750 ORTHO05D007126 8.5e-23 110.2 59 91.5
TWI53G0977 Tripterygium wilfordii HOM05D005750 ORTHO05D007126 8.5e-23 110.2 54 96.3
TAR636G2178 Trochodendron aralioides HOM05D005750 ORTHO05D007126 8.5e-23 110.2 54 94.4
CDE02G4717 Ceratophyllum demersum HOM05D005750 ORTHO05D007126 1.1e-22 109.8 54 94.4
Lalb_Chr07g0193351 Lupinus albus HOM05D005750 ORTHO05D007126 1.1e-22 109.8 56 92.9
Ca_23812_v3 Cicer arietinum L. HOM05D005750 ORTHO05D007126 1.5e-22 109.4 54 96.3
ClCG10G021760 Citrullus lanatus HOM05D005750 ORTHO05D007126 1.5e-22 109.4 54 94.4
MELO3C009196.2 Cucumis melo HOM05D005750 ORTHO05D007126 1.5e-22 109.4 54 94.4
CsaV3_3G034210 Cucumis sativus L. HOM05D005750 ORTHO05D007126 1.5e-22 109.4 54 94.4
Lj3g0021719 Lotus japonicus HOM05D005750 ORTHO05D007126 1.5e-22 109.4 54 96.3
Medtr4g014710 Medicago truncatula HOM05D005750 ORTHO05D007126 1.5e-22 109.4 54 96.3
Ciclev10012396m.g Citrus clementina HOM05D005750 ORTHO05D007126 1.9e-22 109.0 54 94.4
Lsat_1_v5_gn_8_99481 Lactuca sativa HOM05D005750 ORTHO05D007126 1.9e-22 109.0 54 94.4
Potri.016G110300 Populus trichocarpa HOM05D005750 ORTHO05D007126 1.9e-22 109.0 54 94.4
Nitab4.5_0000119g0240 Nicotiana tabacum HOM05D005750 ORTHO05D007126 2.5e-22 108.6 54 94.4
Nitab4.5_0006439g0020 Nicotiana tabacum HOM05D005750 ORTHO05D007126 2.5e-22 108.6 54 94.4
Potri.006G095700 Populus trichocarpa HOM05D005750 ORTHO05D007126 2.5e-22 108.6 54 94.4
Sc01g0006740 Simmondsia chinensis HOM05D005750 ORTHO05D007126 2.5e-22 108.6 54 94.4
CANSAT35G0049 Cannabis sativa HOM05D005750 ORTHO05D007126 3.2e-22 108.2 54 94.4
CAN.G351.8 Capsicum annuum HOM05D005750 ORTHO05D007126 3.2e-22 108.2 54 92.6
Ah.11g045300 Amaranthus hybridus HOM05D005750 ORTHO05D007126 4.2e-22 107.8 54 92.6
Gorai.002G260600 Gossypium raimondii HOM05D005750 ORTHO05D007126 4.2e-22 107.8 54 94.4
Manes.09G101500 Manihot esculenta HOM05D005750 ORTHO05D007126 4.2e-22 107.8 54 94.4
TAR623G1708 Trochodendron aralioides HOM05D005750 ORTHO05D007126 4.2e-22 107.8 54 92.6
Sed0026182 Sechium edule HOM05D005750 ORTHO05D007126 7.2e-22 107.1 54 90.7
ATR0618G451 Amborella trichopoda HOM05D005750 ORTHO05D007126 1.2e-21 106.3 54 92.6
Haze_20940 Corylus avellana HOM05D005750 ORTHO05D007126 1.2e-21 106.3 54 90.7
Duzib093G0788 Durio zibethinus HOM05D005750 ORTHO05D007126 1.2e-21 106.3 63 84.1
Psat7g247000 Pisum sativum HOM05D005750 ORTHO05D007126 1.2e-21 106.3 54 92.6
GSVIVG01034019001 Vitis vinifera HOM05D005750 ORTHO05D007126 1.2e-21 106.3 54 90.7
Hund15288 Selenicereus undatus HOM05D005750 ORTHO05D007126 1.6e-21 105.9 54 90.7
SGA_v2.0_scaffold240G44116 Striga asiatica HOM05D005750 ORTHO05D007126 1.6e-21 105.9 52 96.2
HPP92_018186 Vanilla planifolia HOM05D005750 ORTHO05D007126 2.1e-21 105.5 54 90.7
Atru.chr8.2137 Acer truncatum HOM05D005750 ORTHO05D007126 2.7e-21 105.1 56 92.9
Sabra06G0073600 Salix brachista HOM05D005750 ORTHO05D007126 2.7e-21 105.1 54 90.7
Cpa.g.sc56.104 Carica papaya HOM05D005750 ORTHO05D007126 3.6e-21 104.8 54 90.7
MSTRG.26795 Avicennia marina HOM05D005750 ORTHO05D007126 4.7e-21 104.4 52 94.2
Peaxi162Scf00014g00091 Petunia axillaris HOM05D005750 ORTHO05D007126 4.7e-21 104.4 55 92.7
Sabra16G0106800 Salix brachista HOM05D005750 ORTHO05D007126 6.1e-21 104.0 54 90.7
PSO384G4196 Papaver somniferum HOM05D005750 ORTHO05D007126 8.0e-21 103.6 52 92.3
Sopen10g036170 Solanum pennellii HOM05D005750 ORTHO05D007126 8.0e-21 103.6 54 90.7
THA.LOC104823389 Tarenaya hassleriana HOM05D005750 ORTHO05D007126 8.0e-21 103.6 54 90.7
PSO339G6575 Papaver somniferum HOM05D005750 ORTHO05D007126 1.0e-20 103.2 52 92.3
A09p47130 Brassica napus HOM05D005750 ORTHO05D007126 1.8e-20 102.4 54 87.0
C08p29390 Brassica napus HOM05D005750 ORTHO05D007126 1.8e-20 102.4 54 87.0
BolC8t50540H Brassica oleracea HOM05D005750 ORTHO05D007126 1.8e-20 102.4 54 87.0
BraA09t40175Z Brassica rapa HOM05D005750 ORTHO05D007126 1.8e-20 102.4 54 87.0
Migut.J00232 Erythranthe guttata HOM05D005750 ORTHO05D007126 1.8e-20 102.4 50 96.0
A04p05670 Brassica napus HOM05D005750 ORTHO05D007126 3.0e-20 101.7 54 87.0
AL5G35150 Arabidopsis lyrata HOM05D005750 ORTHO05D007126 5.2e-20 100.9 54 87.0
AT3G54130 Arabidopsis thaliana HOM05D005750 ORTHO05D007126 5.2e-20 100.9 54 87.0
A04p05660 Brassica napus HOM05D005750 ORTHO05D007126 5.2e-20 100.9 57 82.5
Thhalv10010608m.g Eutrema salsugineum HOM05D005750 ORTHO05D007126 5.2e-20 100.9 54 87.0
BraA04t16263Z Brassica rapa HOM05D005750 ORTHO05D007126 6.8e-20 100.5 54 85.2
Carub.0005s2072 Capsella rubella HOM05D005750 ORTHO05D007126 6.8e-20 100.5 54 87.0
CARHR164010 Cardamine hirsuta HOM05D005750 ORTHO05D007126 6.8e-20 100.5 59 81.4
BcaB02g08472 Brassica carinata HOM05D005750 ORTHO05D007126 1.2e-19 99.8 54 85.2
BcaC02g09095 Brassica carinata HOM05D005750 ORTHO05D007126 1.2e-19 99.8 54 85.2
C04p38380 Brassica napus HOM05D005750 ORTHO05D007126 1.2e-19 99.8 54 85.2
BolC4t25415H Brassica oleracea HOM05D005750 ORTHO05D007126 1.2e-19 99.8 54 85.2
Aa31sc171G20 Aethionema arabicum HOM05D005750 ORTHO05D007126 1.5e-19 99.4 54 85.2
Sp5g08260 Schrenkiella parvula HOM05D005750 ORTHO05D007126 2.6e-19 98.6 54 83.3
BcaB01g00216 Brassica carinata HOM05D005750 ORTHO05D007126 3.4e-19 98.2 54 83.3
Zm00001eb147810 Zea mays HOM05D005750 ORTHO05D007126 4.4e-19 97.8 54 81.5
Zm00001eb367490 Zea mays HOM05D005750 ORTHO05D007126 4.4e-19 97.8 54 81.5
unitig_46.g18409 Utricularia gibba HOM05D005750 ORTHO05D007126 5.7e-19 97.4 49 89.8
Oeu004613.2 Olea europaea HOM05D005750 ORTHO05D007126 3.7e-18 94.7 46 95.7
Os01g0851400 Oryza sativa ssp. japonica HOM05D005750 ORTHO05D007126 4.8e-18 94.4 50 84.0
CiPaw.10G154000 Carya illinoinensis HOM05D005750 ORTHO05D007126 6.3e-18 94.0 46 93.5
SEGI_00199 Sequoiadendron giganteum HOM05D005750 ORTHO05D007126 1.8e-17 92.4 50 80.0
TPR.G5190 Trifolium pratense HOM05D005750 ORTHO05D007126 7.7e-16 87.0 54 72.2
SGA_v2.0_scaffold85G26769 Striga asiatica HOM05D005750 ORTHO05D007126 1.0e-15 86.7 48 81.2
AagrBONN_evm.TU.Sc2ySwM_344.3267 Anthoceros agrestis HOM05D005750 ORTHO05D007126 6.6e-15 84.0 55 69.1
Pp3c7_8520 Physcomitrium patens HOM05D005750 ORTHO05D007126 1.0e-12 76.6 46 69.6
SMO203G0145 Selaginella moellendorffii HOM05D005750 ORTHO05D007126 1.0e-12 76.6 45 73.3
Gohir.D04G128250 Gossypium hirsutum HOM05D005750 ORTHO05D007126 3.0e-12 75.1 38 94.7
CBR_g865 Chara braunii HOM05D005750 ORTHO05D007126 8.9e-12 73.6 58 55.2
Gorai.012G111300 Gossypium raimondii HOM05D005750 ORTHO05D007126 2.6e-11 72.0 38 92.1
Cre11.g475450 Chlamydomonas reinhardtii HOM05D005750 ORTHO05D007126 4.5e-08 61.2 46 56.5
MCO10G202 Micromonas commoda HOM05D005750 ORTHO05D007126 1.3e-07 59.7 47 53.2
Haze_26299 Corylus avellana HOM05D005750 ORTHO05D007126 1.5e-06 56.2 46 50.0
Glyma.07G142100 Glycine max HOM05D005750 ORTHO05D007126 5.6e-06 54.3 64 53.1


User provided reference genes

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