Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g11170 Nelumbo nucifera HOM05D003544 ORTHO05D003830 4.5e-172 607.8 308 100.0
TAR623G1685 Trochodendron aralioides HOM05D003544 ORTHO05D003830 2.8e-81 306.2 175 90.3
Cfa001450 Carpinus fangiana HOM05D003544 ORTHO05D003830 6.3e-81 305.1 194 83.0
PSO339G1680 Papaver somniferum HOM05D003544 ORTHO05D003830 8.2e-81 304.7 175 90.3
PSO063G3772 Papaver somniferum HOM05D003544 ORTHO05D003830 1.1e-80 304.3 178 88.2
CiPaw.01G289700 Carya illinoinensis HOM05D003544 ORTHO05D003830 1.8e-80 303.5 175 89.7
GSVIVG01016511001 Vitis vinifera HOM05D003544 ORTHO05D003830 3.1e-80 302.8 172 90.1
Cc02_g07580 Coffea canephora HOM05D003544 ORTHO05D003830 9.0e-80 301.2 175 88.6
Sc10g0001720 Simmondsia chinensis HOM05D003544 ORTHO05D003830 9.0e-80 301.2 173 88.4
CSS0004294 Camellia sinensis var. sinensis HOM05D003544 ORTHO05D003830 1.2e-79 300.8 176 88.1
Cpa.g.sc1.429 Carica papaya HOM05D003544 ORTHO05D003830 1.2e-79 300.8 182 85.7
Gohir.D03G122700 Gossypium hirsutum HOM05D003544 ORTHO05D003830 1.5e-79 300.4 172 90.1
Gorai.003G129400 Gossypium raimondii HOM05D003544 ORTHO05D003830 2.6e-79 299.7 172 89.5
Thecc.10G037000 Theobroma cacao HOM05D003544 ORTHO05D003830 3.4e-79 299.3 175 88.0
Medtr3g067995 Medicago truncatula HOM05D003544 ORTHO05D003830 4.5e-79 298.9 177 86.4
Psat5g123600 Pisum sativum HOM05D003544 ORTHO05D003830 4.5e-79 298.9 177 85.9
Gohir.A03G044500 Gossypium hirsutum HOM05D003544 ORTHO05D003830 5.9e-79 298.5 172 89.5
Lj6g0009635 Lotus japonicus HOM05D003544 ORTHO05D003830 5.9e-79 298.5 175 87.4
Peaxi162Scf00164g01220 Petunia axillaris HOM05D003544 ORTHO05D003830 5.9e-79 298.5 209 78.0
COL.COLO4_15089 Corchorus olitorius HOM05D003544 ORTHO05D003830 1.0e-78 297.7 175 88.0
Dinv34268 Davidia involucrata HOM05D003544 ORTHO05D003830 1.3e-78 297.4 173 87.9
Glyma.18G037200 Glycine max HOM05D003544 ORTHO05D003830 1.3e-78 297.4 175 86.9
Atru.chr12.416 Acer truncatum HOM05D003544 ORTHO05D003830 1.7e-78 297.0 171 90.1
Ca_08172_v3 Cicer arietinum L. HOM05D003544 ORTHO05D003830 2.9e-78 296.2 175 86.9
COL.COLO4_18562 Corchorus olitorius HOM05D003544 ORTHO05D003830 2.9e-78 296.2 175 87.4
Haze_17091 Corylus avellana HOM05D003544 ORTHO05D003830 2.9e-78 296.2 200 79.5
Phvul.001G233500 Phaseolus vulgaris HOM05D003544 ORTHO05D003830 2.9e-78 296.2 175 86.3
Glyma.11G220200 Glycine max HOM05D003544 ORTHO05D003830 3.8e-78 295.8 175 86.3
Nitab4.5_0006365g0020 Nicotiana tabacum HOM05D003544 ORTHO05D003830 3.8e-78 295.8 175 87.4
QL08p060246 Quercus lobata HOM05D003544 ORTHO05D003830 5.0e-78 295.4 182 83.5
QL08p060482 Quercus lobata HOM05D003544 ORTHO05D003830 5.0e-78 295.4 182 83.5
VMungo1383G2117 Vigna mungo HOM05D003544 ORTHO05D003830 5.0e-78 295.4 175 86.9
Duzib114G0911 Durio zibethinus HOM05D003544 ORTHO05D003830 6.5e-78 295.0 175 86.3
Nitab4.5_0000647g0150 Nicotiana tabacum HOM05D003544 ORTHO05D003830 6.5e-78 295.0 175 87.4
Thecc.09G317500 Theobroma cacao HOM05D003544 ORTHO05D003830 6.5e-78 295.0 176 87.5
Sopen05g031560 Solanum pennellii HOM05D003544 ORTHO05D003830 1.1e-77 294.3 175 86.9
Prupe.6G071900 Prunus persica HOM05D003544 ORTHO05D003830 3.2e-77 292.7 175 85.1
Hund16071 Selenicereus undatus HOM05D003544 ORTHO05D003830 3.2e-77 292.7 172 89.0
vmacro10222 Vaccinium macrocarpon HOM05D003544 ORTHO05D003830 3.2e-77 292.7 172 88.4
Aqoxy1G00897 Aquilegia oxysepala HOM05D003544 ORTHO05D003830 4.2e-77 292.4 175 85.7
CANSAT54G2540 Cannabis sativa HOM05D003544 ORTHO05D003830 4.2e-77 292.4 182 82.4
FAN01G0392 Fragaria x ananassa HOM05D000150 ORTHO05D003830 4.2e-77 292.4 177 85.9
FAN01G0956 Fragaria x ananassa HOM05D000150 ORTHO05D003830 4.2e-77 292.4 177 85.9
FvH4_7g22830 Fragaria vesca HOM05D003544 ORTHO05D003830 5.5e-77 292.0 175 86.9
FAN03G2315 Fragaria x ananassa HOM05D003544 ORTHO05D003830 5.5e-77 292.0 175 86.9
FAN06G0546 Fragaria x ananassa HOM05D003544 ORTHO05D003830 5.5e-77 292.0 175 86.9
RcHm_v2.0_Chr1g0367981 Rosa chinensis HOM05D003544 ORTHO05D003830 5.5e-77 292.0 175 86.9
Atru.chr3.3967 Acer truncatum HOM05D003544 ORTHO05D003830 7.2e-77 291.6 173 86.1
Manes.07G118000 Manihot esculenta HOM05D003544 ORTHO05D003830 7.2e-77 291.6 173 86.7
MD11G1096300 Malus domestica HOM05D003544 ORTHO05D003830 9.4e-77 291.2 175 85.1
SGA_v2.0_scaffold221G42690 Striga asiatica HOM05D003544 ORTHO05D003830 9.4e-77 291.2 175 86.3
Duzib106G1967 Durio zibethinus HOM05D003544 ORTHO05D003830 1.2e-76 290.8 175 85.1
FAN10G3533 Fragaria x ananassa HOM05D003544 ORTHO05D003830 1.2e-76 290.8 175 86.3
Lj8A82T51 Lonicera japonica HOM05D003544 ORTHO05D003830 1.2e-76 290.8 179 83.8
Dinv06767 Davidia involucrata HOM05D003544 ORTHO05D003830 1.6e-76 290.4 175 85.1
HanXRQChr10g0312851 Helianthus annuus HOM05D003544 ORTHO05D003830 1.6e-76 290.4 172 86.6
Prupe.2G238100 Prunus persica HOM05D003544 ORTHO05D003830 1.6e-76 290.4 172 87.8
Migut.F01531 Erythranthe guttata HOM05D003544 ORTHO05D003830 2.1e-76 290.0 175 85.7
Manes.01G170400 Manihot esculenta HOM05D003544 ORTHO05D003830 2.1e-76 290.0 172 86.6
SGA_v2.0_scaffold2G01024 Striga asiatica HOM05D003544 ORTHO05D003830 2.1e-76 290.0 175 86.3
AUR62012119 Chenopodium quinoa HOM05D003544 ORTHO05D003830 2.7e-76 289.7 173 87.3
AUR62040717 Chenopodium quinoa HOM05D003544 ORTHO05D003830 2.7e-76 289.7 173 87.3
Solyc05g053040.3 Solanum lycopersicum HOM05D003544 ORTHO05D003830 2.7e-76 289.7 176 86.4
CANSAT56G1342 Cannabis sativa HOM05D003544 ORTHO05D003830 3.6e-76 289.3 174 86.2
ClCG11G006780 Citrullus lanatus HOM05D003544 ORTHO05D003830 4.6e-76 288.9 176 86.4
CsaV3_6G001260 Cucumis sativus L. HOM05D003544 ORTHO05D003830 4.6e-76 288.9 176 86.4
Potri.009G034700 Populus trichocarpa HOM05D003544 ORTHO05D003830 6.1e-76 288.5 174 86.8
Potri.010G201500 Populus trichocarpa HOM05D003544 ORTHO05D003830 6.1e-76 288.5 175 84.6
Oeu017652.1 Olea europaea HOM05D003544 ORTHO05D003830 7.9e-76 288.1 183 83.6
PGR119G0781 Punica granatum HOM05D003544 ORTHO05D003830 7.9e-76 288.1 173 85.5
MSTRG.8261 Avicennia marina HOM05D003544 ORTHO05D003830 1.4e-75 287.3 175 86.3
MD07G1201500 Malus domestica HOM05D003544 ORTHO05D003830 1.4e-75 287.3 175 85.7
vmacro03041 Vaccinium macrocarpon HOM05D003544 ORTHO05D003830 1.4e-75 287.3 173 85.0
Cfa011530 Carpinus fangiana HOM05D003544 ORTHO05D003830 1.8e-75 287.0 172 84.3
EL10Ac2g04722 Beta vulgaris HOM05D003544 ORTHO05D003830 2.3e-75 286.6 172 87.2
Cpa.g.sc81.110 Carica papaya HOM05D003544 ORTHO05D003830 2.3e-75 286.6 175 84.0
Ciclev10030412m.g Citrus clementina HOM05D003544 ORTHO05D003830 2.3e-75 286.6 175 84.0
Lsat_1_v5_gn_2_118280 Lactuca sativa HOM05D003544 ORTHO05D003830 2.3e-75 286.6 172 85.5
MBI05_g29687_MAGBIO Magnolia biondii HOM05D003544 ORTHO05D003830 2.3e-75 286.6 174 87.4
Duzib168G0263 Durio zibethinus HOM05D003544 ORTHO05D003830 5.1e-75 285.4 176 85.8
Duzib170G0696 Durio zibethinus HOM05D003544 ORTHO05D003830 6.7e-75 285.0 176 85.2
MD01G1136500 Malus domestica HOM05D003544 ORTHO05D003830 6.7e-75 285.0 175 85.1
GSVIVG01024921001 Vitis vinifera HOM05D003544 ORTHO05D003830 6.7e-75 285.0 178 83.7
EL10Ac7g16053 Beta vulgaris HOM05D003544 ORTHO05D003830 1.1e-74 284.3 173 82.7
Eucgr.G02946 Eucalyptus grandis HOM05D003544 ORTHO05D003830 1.1e-74 284.3 173 84.4
arahy.Tifrunner.gnm1.ann1.2U9KWS Arachis hypogaea HOM05D003544 ORTHO05D003830 3.3e-74 282.7 206 74.3
QL01p030710 Quercus lobata HOM05D003544 ORTHO05D003830 4.3e-74 282.3 172 84.3
Ciclev10032379m.g Citrus clementina HOM05D003544 ORTHO05D003830 7.4e-74 281.6 173 83.8
ECA232G4890 Erigeron canadensis HOM05D003544 ORTHO05D003830 9.7e-74 281.2 172 85.5
Sed0003735 Sechium edule HOM05D003544 ORTHO05D003830 9.7e-74 281.2 176 83.5
arahy.Tifrunner.gnm1.ann1.95BPNM Arachis hypogaea HOM05D003544 ORTHO05D003830 1.3e-73 280.8 200 75.5
Gohir.A13G227000 Gossypium hirsutum HOM05D003544 ORTHO05D003830 1.3e-73 280.8 172 85.5
Hma1.2p1_1480F.1_g286053 Hydrangea macrophylla HOM05D003544 ORTHO05D003830 1.7e-73 280.4 175 81.7
Sp5g06950 Schrenkiella parvula HOM05D003544 ORTHO05D003830 1.7e-73 280.4 198 75.8
ATR0559G280 Amborella trichopoda HOM05D003544 ORTHO05D003830 2.2e-73 280.0 172 86.6
BcaC07g39879 Brassica carinata HOM05D003544 ORTHO05D003830 2.2e-73 280.0 175 84.0
A09p48540 Brassica napus HOM05D003544 ORTHO05D003830 2.2e-73 280.0 175 84.0
C08p30840 Brassica napus HOM05D003544 ORTHO05D003830 2.2e-73 280.0 175 84.0
BolC8t50710H Brassica oleracea HOM05D003544 ORTHO05D003830 2.2e-73 280.0 175 84.0
Gorai.013G263100 Gossypium raimondii HOM05D003544 ORTHO05D003830 2.2e-73 280.0 175 84.0
THA.LOC104810038 Tarenaya hassleriana HOM05D003544 ORTHO05D003830 2.8e-73 279.6 175 82.9
Rhsim09G0167200 Rhododendron simsii HOM05D003544 ORTHO05D003830 3.7e-73 279.3 194 77.8
Ah.15g098530 Amaranthus hybridus HOM05D003544 ORTHO05D003830 6.3e-73 278.5 176 83.5
AL5G36700 Arabidopsis lyrata HOM05D003544 ORTHO05D003830 6.3e-73 278.5 175 83.4
Carub.0005s2226 Capsella rubella HOM05D003544 ORTHO05D003830 6.3e-73 278.5 175 83.4
AUR62001751 Chenopodium quinoa HOM05D003544 ORTHO05D003830 6.3e-73 278.5 179 79.9
Lalb_Chr15g0084651 Lupinus albus HOM05D003544 ORTHO05D003830 8.2e-73 278.1 175 82.9
Sed0018949 Sechium edule HOM05D003544 ORTHO05D003830 1.1e-72 277.7 176 83.5
CSS0032889 Camellia sinensis var. sinensis HOM05D003544 ORTHO05D003830 1.4e-72 277.3 173 82.1
MSTRG.276 Avicennia marina HOM05D003544 ORTHO05D003830 1.8e-72 276.9 175 85.1
Gohir.D13G232300 Gossypium hirsutum HOM05D003544 ORTHO05D003830 1.8e-72 276.9 175 83.4
Thhalv10010626m.g Eutrema salsugineum HOM05D003544 ORTHO05D003830 2.4e-72 276.6 175 82.9
BcaB01g00085 Brassica carinata HOM05D003544 ORTHO05D003830 4.1e-72 275.8 175 82.9
TWI15G1030 Tripterygium wilfordii HOM05D003544 ORTHO05D003830 5.3e-72 275.4 175 81.1
AT3G55530 Arabidopsis thaliana HOM05D003544 ORTHO05D003830 1.5e-71 273.9 176 83.0
Ah.16g102480 Amaranthus hybridus HOM05D003544 ORTHO05D003392 2.6e-71 273.1 175 84.0
Hma1.2p1_0757F.1_g213320 Hydrangea macrophylla HOM05D003544 ORTHO05D003830 2.6e-71 273.1 192 76.0
Haze_24135 Corylus avellana HOM05D003544 ORTHO05D003830 3.4e-71 272.7 191 75.4
PGR142G2124 Punica granatum HOM05D003544 ORTHO05D003830 7.7e-71 271.6 176 79.5
Rhsim13G0078200 Rhododendron simsii HOM05D000082 ORTHO05D003830 1.3e-70 270.8 164 83.5
Actinidia08535 Actinidia chinensis HOM05D003544 ORTHO05D003830 1.7e-70 270.4 182 78.0
AUR62020020 Chenopodium quinoa HOM05D002577 ORTHO05D003830 3.8e-70 269.2 179 77.7
TWI31G1295 Tripterygium wilfordii HOM05D003544 ORTHO05D003830 5.0e-70 268.9 184 77.2
HPP92_006644 Vanilla planifolia HOM05D003544 ORTHO05D003830 6.5e-70 268.5 185 76.2
CDE02G1059 Ceratophyllum demersum HOM05D003544 ORTHO05D003830 8.5e-70 268.1 172 79.7
Sabra09G0024700 Salix brachista HOM05D002577 ORTHO05D002883 1.9e-69 266.9 209 71.8
Gorai.011G266800 Gossypium raimondii HOM05D003544 ORTHO05D003830 4.2e-69 265.8 175 78.9
CARHR165590 Cardamine hirsuta HOM05D003544 ORTHO05D003830 1.6e-68 263.8 175 81.7
Gohir.D10G233200 Gossypium hirsutum HOM05D003544 ORTHO05D003830 1.6e-68 263.8 175 78.3
Os03g0272300 Oryza sativa ssp. japonica HOM05D003544 ORTHO05D003830 2.7e-68 263.1 174 79.9
Phvul.011G062500 Phaseolus vulgaris HOM05D003544 ORTHO05D003830 3.6e-68 262.7 175 76.0
CiPaw.13G090700 Carya illinoinensis HOM05D003544 ORTHO05D003830 4.7e-68 262.3 172 80.8
SHI22634 Sapria himalayana HOM05D003544 ORTHO05D003830 6.1e-68 261.9 176 75.6
Gohir.A10G221000 Gossypium hirsutum HOM05D003544 ORTHO05D003830 1.0e-67 261.2 175 77.1
Glyma.11G137400 Glycine max HOM05D003544 ORTHO05D003830 3.0e-67 259.6 175 76.6
Lj1A148T52 Lonicera japonica HOM05D003544 ORTHO05D003830 3.0e-67 259.6 173 76.9
VMungo1127G1202 Vigna mungo HOM05D003544 ORTHO05D003830 3.9e-67 259.2 175 76.0
Aa31LG10G10560 Aethionema arabicum HOM05D003544 ORTHO05D003830 1.5e-66 257.3 181 76.2
TPR.G15819 Trifolium pratense HOM05D003544 ORTHO05D003830 2.6e-66 256.5 182 74.7
unitig_0.g1019 Utricularia gibba HOM05D003544 ORTHO05D003830 3.3e-66 256.1 177 78.0
Psat7g210640 Pisum sativum HOM05D003544 ORTHO05D003830 8.2e-65 251.5 175 73.7
Ca_20624_v3 Cicer arietinum L. HOM05D003544 ORTHO05D003830 1.1e-64 251.1 175 72.6
PGSC0003DMG400027142 Solanum tuberosum HOM05D000478 ORTHO05D003830 1.8e-64 250.4 158 82.3
Zm00001eb012200 Zea mays HOM05D003544 ORTHO05D003830 1.8e-64 250.4 179 74.3
Hund04929 Selenicereus undatus HOM05D003544 ORTHO05D003830 4.1e-64 249.2 171 78.4
Lj3g0017508 Lotus japonicus HOM05D003544 ORTHO05D003830 7.0e-64 248.4 175 72.0
Lj1C940T8 Lonicera japonica HOM05D003544 ORTHO05D003830 4.5e-63 245.7 176 76.7
arahy.Tifrunner.gnm1.ann1.80FYU6 Arachis hypogaea HOM05D003544 ORTHO05D003830 5.9e-63 245.4 175 71.4
TPR.G23586 Trifolium pratense HOM05D003544 ORTHO05D003830 1.7e-62 243.8 175 70.9
Glyma.12G060800 Glycine max HOM05D003544 ORTHO05D003830 4.2e-61 239.2 203 65.0
Eucgr.J02038 Eucalyptus grandis HOM05D003544 ORTHO05D003830 1.2e-60 237.7 174 74.1
Lalb_Chr24g0394051 Lupinus albus HOM05D003544 ORTHO05D003830 1.4e-59 234.2 179 68.2
PSO339G2861 Papaver somniferum HOM05D003544 ORTHO05D003830 1.1e-58 231.1 174 72.4
arahy.Tifrunner.gnm1.ann1.1A4P42 Arachis hypogaea HOM05D003544 ORTHO05D003830 1.4e-56 224.2 213 58.2
SMO367G0986 Selaginella moellendorffii HOM05D003544 ORTHO05D003830 2.4e-56 223.4 174 69.5
CDE08G0984 Ceratophyllum demersum HOM05D003544 ORTHO05D003830 4.1e-56 222.6 172 70.9
FAN06G3709 Fragaria x ananassa HOM05D003544 ORTHO05D003830 9.1e-56 221.5 176 72.2
MELO3C008223.2 Cucumis melo HOM05D003544 ORTHO05D003830 2.0e-55 220.3 126 89.7
Psat0ss2553g0040 Pisum sativum HOM05D003544 ORTHO05D003830 2.6e-55 219.9 175 68.6
Mapoly0020s0054 Marchantia polymorpha HOM05D003544 ORTHO05D003830 1.3e-54 217.6 173 68.8
Sabra10G0155500 Salix brachista HOM05D003544 ORTHO05D003830 3.8e-54 216.1 175 67.4
PSO513G0026 Papaver somniferum HOM05D003544 ORTHO05D003830 5.0e-54 215.7 175 65.1
Pp3c15_2690 Physcomitrium patens HOM05D003544 ORTHO05D003830 1.0e-51 208.0 180 63.3
Medtr4g064560 Medicago truncatula HOM05D003544 ORTHO05D003830 1.8e-51 207.2 175 62.9
Medtr4g064550 Medicago truncatula HOM05D003544 ORTHO05D003830 9.7e-50 201.4 175 61.7
Actinidia13886 Actinidia chinensis HOM05D003544 ORTHO05D003830 1.1e-48 198.0 114 89.5
PSO339G1503 Papaver somniferum HOM05D003544 ORTHO05D003830 1.3e-46 191.0 176 61.9
PSO675G7116 Papaver somniferum HOM05D003544 ORTHO05D003830 3.2e-45 186.4 175 60.6
Zm00001eb397760 Zea mays HOM05D003544 ORTHO05D003830 4.2e-45 186.0 123 78.0
AagrBONN_evm.TU.Sc2ySwM_344.3221 Anthoceros agrestis HOM05D003544 ORTHO05D003830 2.2e-41 173.7 138 67.4
Pp3c9_2330 Physcomitrium patens HOM05D003544 ORTHO05D003830 2.8e-41 173.3 177 54.2
Ca_26141_v3 Cicer arietinum L. HOM05D001813 ORTHO05D003830 6.3e-41 172.2 107 86.0
Duzib150G1491 Durio zibethinus HOM05D003544 ORTHO05D003830 1.2e-36 157.9 126 69.8
Actinidia26727 Actinidia chinensis HOM05D003544 ORTHO05D003830 9.8e-26 121.7 163 49.7
Actinidia12908 Actinidia chinensis HOM05D003544 ORTHO05D003830 3.9e-22 109.8 183 43.7
Actinidia36892 Actinidia chinensis HOM05D003544 ORTHO05D003830 3.6e-20 103.2 65 80.0
Peaxi162Scf00122g00048 Petunia axillaris HOM05D003544 ORTHO05D003830 3.2e-16 90.1 139 37.4
PGSC0003DMG400002152 Solanum tuberosum HOM05D003544 ORTHO05D003830 1.9e-13 80.9 137 39.4
Nitab4.5_0000272g0040 Nicotiana tabacum HOM05D003544 ORTHO05D003830 2.5e-13 80.5 107 43.0
DCAR_010129 Daucus carota HOM05D001994 ORTHO05D001954 7.3e-13 79.0 53 69.8
Nitab4.5_0008249g0030 Nicotiana tabacum HOM05D003544 ORTHO05D003830 2.8e-12 77.0 107 42.1
Sc21g0005970 Simmondsia chinensis HOM05D003544 ORTHO05D003830 1.1e-11 75.1 105 46.7
arahy.Tifrunner.gnm1.ann1.J5AQBN Arachis hypogaea HOM05D003544 ORTHO05D003830 4.4e-10 69.7 55 65.5
DCAR_018921 Daucus carota HOM05D003544 ORTHO05D003830 1.3e-09 68.2 171 30.4
arahy.Tifrunner.gnm1.ann1.JYY6TN Arachis hypogaea HOM05D003544 ORTHO05D003830 2.2e-09 67.4 55 63.6
Sopen06g001600 Solanum pennellii HOM05D003544 ORTHO05D003830 3.9e-06 56.6 133 31.6


User provided reference genes

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