Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g11060 Nelumbo nucifera HOM05D000501 ORTHO05D000376 6.4e-45 183.7 94 100.0
Nn3g21429 Nelumbo nucifera HOM05D000501 ORTHO05D000376 2.3e-26 122.1 114 64.9
Nn1g00099 Nelumbo nucifera HOM05D000501 ORTHO05D049315 1.2e-11 73.2 91 52.7
Nn1g00211 Nelumbo nucifera HOM05D000501 ORTHO05D049315 1.2e-11 73.2 91 52.7
Aqoxy5G00711 Aquilegia oxysepala HOM05D000501 ORTHO05D000376 1.4e-10 69.7 110 43.6
Sabra05G0031600 Salix brachista HOM05D000501 ORTHO05D000376 3.9e-10 68.2 97 44.3
Cfa006622 Carpinus fangiana HOM05D000501 ORTHO05D000376 5.1e-10 67.8 108 42.6
QL03p021384 Quercus lobata HOM05D000501 ORTHO05D000376 6.7e-10 67.4 109 44.0
Potri.005G026200 Populus trichocarpa HOM05D000501 ORTHO05D000376 1.1e-09 66.6 97 43.3
Haze_04148 Corylus avellana HOM05D000501 ORTHO05D000376 3.3e-09 65.1 94 43.6
Duzib177G0785 Durio zibethinus HOM05D000501 ORTHO05D000376 7.4e-09 63.9 95 43.2
Gohir.A11G267300 Gossypium hirsutum HOM05D000501 ORTHO05D000376 9.7e-09 63.5 97 42.3
Gohir.D11G277300 Gossypium hirsutum HOM05D000501 ORTHO05D000376 9.7e-09 63.5 97 42.3
Thecc.05G312200 Theobroma cacao HOM05D000501 ORTHO05D000376 1.3e-08 63.2 96 42.7
Duzib106G0595 Durio zibethinus HOM05D000501 ORTHO05D000376 2.2e-08 62.4 95 42.1
VMungo0540G2074 Vigna mungo HOM05D000501 ORTHO05D000376 4.8e-08 61.2 94 43.6
Gorai.007G299500 Gossypium raimondii HOM05D000501 ORTHO05D000376 1.1e-07 60.1 97 41.2
arahy.Tifrunner.gnm1.ann1.F7UUKP Arachis hypogaea HOM05D000501 ORTHO05D000376 1.4e-07 59.7 93 43.0
arahy.Tifrunner.gnm1.ann1.RRC04T Arachis hypogaea HOM05D000501 ORTHO05D000376 1.4e-07 59.7 93 43.0
Cpa.g.sc48.86 Carica papaya HOM05D000501 ORTHO05D000376 3.1e-07 58.5 95 41.1
CiPaw.07G020800 Carya illinoinensis HOM05D000501 ORTHO05D000376 3.1e-07 58.5 112 40.2
Phvul.006G090200 Phaseolus vulgaris HOM05D000501 ORTHO05D000376 3.1e-07 58.5 94 41.5
Prupe.6G321500 Prunus persica HOM05D000501 ORTHO05D000376 5.3e-07 57.8 103 40.8
ClCG03G017090 Citrullus lanatus HOM05D000501 ORTHO05D000376 6.9e-07 57.4 40 70.0
Manes.08G118500 Manihot esculenta HOM05D000501 ORTHO05D000376 9.1e-07 57.0 97 43.3
MELO3C015312.2 Cucumis melo HOM05D000501 ORTHO05D000376 1.5e-06 56.2 38 71.1
CsaV3_1G038860 Cucumis sativus L. HOM05D000501 ORTHO05D000376 1.5e-06 56.2 38 71.1
Glyma.03G236300 Glycine max HOM05D000501 ORTHO05D000376 1.5e-06 56.2 99 41.4
Ciclev10000227m.g Citrus clementina HOM05D000501 ORTHO05D000376 2.6e-06 55.5 111 39.6
COL.COLO4_10511 Corchorus olitorius HOM05D000501 ORTHO05D000376 2.6e-06 55.5 40 75.0
Eucgr.H04514 Eucalyptus grandis HOM05D000501 ORTHO05D000376 3.4e-06 55.1 96 43.8
Eucgr.L01771 Eucalyptus grandis HOM05D000501 ORTHO05D000376 3.4e-06 55.1 96 43.8
Nitab4.5_0007958g0020 Nicotiana tabacum HOM05D000501 ORTHO05D000376 4.5e-06 54.7 88 44.3


User provided reference genes

Program Settings