Gene: COL.COLO4_10511
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_10511
- Transcript Identifier COL.rna9306
- Gene Type Coding gene
- Location AWUE01014526.1 : 13659-18633 : positive
Gene Family Information
- ID HOM05D000501
- #Genes/#Species 1065/98
- Phylogenetic origin
- ID ORTHO05D000376
- #Genes/#Species 1037/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna9306
- GenBank OMP03281.1
- id gene10483
- gene_name COLO4_10511
- uniprot A0A1R3K868
Descriptions
- Description Calcium-binding EF-hand
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0098869 | IEA | GOA Database | cellular oxidant detoxification | |
| GO:0009408 | ISO | PLAZA Integrative Orthology | response to heat | AT1G09090 |
| GO:0006952 | ISO | PLAZA Integrative Orthology | defense response | AT1G09090 |
| GO:0009845 | ISO | PLAZA Integrative Orthology | seed germination | AT1G09090 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0016491 | IEA | GOA Database | oxidoreductase activity | |
| GO:0016491 | IEA | InterPro | oxidoreductase activity | |
| GO:0050664 | IEA | GOA Database | oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor | |
| GO:0050664 | IEA | InterPro | oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor | |
| GO:0004601 | IEA | GOA Database | peroxidase activity | |
| GO:0004601 | IEA | InterPro | peroxidase activity | |
| GO:0005509 | IEA | GOA Database | calcium ion binding | |
| GO:0005509 | IEA | InterPro | calcium ion binding | |
| GO:0016174 | ISO | PLAZA Integrative Orthology | NAD(P)H oxidase H2O2-forming activity | AT1G09090 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR002048 | EF-hand domain |
| IPR013130 | Ferric reductase transmembrane component-like domain |
| IPR013121 | Ferric reductase, NAD binding domain |
| IPR013623 | NADPH oxidase Respiratory burst |
| IPR039261 | Ferredoxin-NADP reductase (FNR), nucleotide-binding domain |
| IPR011992 | EF-hand domain pair |
| IPR017938 | Riboflavin synthase-like beta-barrel |
| IPR013112 | FAD-binding 8 |
| Mapman id | Description |
|---|---|
| 10.1.1 | Redox homeostasis.controlled reactive oxygen generation.NADPH-oxidase (Rboh) |