Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g10602 Nelumbo nucifera HOM05D005673 ORTHO05D007081 3.7e-171 604.7 302 100.0
MBI14_g17793_MAGBIO Magnolia biondii HOM05D005673 ORTHO05D007081 5.4e-69 265.4 190 66.3
PSO384G5123 Papaver somniferum HOM05D005673 ORTHO05D007081 1.6e-68 263.8 191 67.5
PSO339G1442 Papaver somniferum HOM05D005673 ORTHO05D007081 1.0e-67 261.2 184 68.5
Aqoxy4G03141 Aquilegia oxysepala HOM05D005673 ORTHO05D007081 3.0e-67 259.6 190 66.3
Manes.07G105200 Manihot esculenta HOM05D005673 ORTHO05D007081 3.9e-67 259.2 190 66.8
FAN10G0505 Fragaria x ananassa HOM05D005673 ORTHO05D007081 3.6e-65 252.7 229 60.3
FvH4_7g20560 Fragaria vesca HOM05D005673 ORTHO05D007081 6.2e-65 251.9 229 59.8
FAN06G0951 Fragaria x ananassa HOM05D005673 ORTHO05D007081 6.2e-65 251.9 229 59.8
FAN03G2886 Fragaria x ananassa HOM05D005673 ORTHO05D007081 1.1e-64 251.1 229 59.8
RcHm_v2.0_Chr1g0364441 Rosa chinensis HOM05D005673 ORTHO05D007081 1.1e-64 251.1 229 59.4
FAN06G2416 Fragaria x ananassa HOM05D005673 ORTHO05D007081 1.4e-64 250.8 229 59.8
FAN01G1496 Fragaria x ananassa HOM05D005673 ORTHO05D007081 3.1e-64 249.6 229 59.4
FAN01G2008 Fragaria x ananassa HOM05D005673 ORTHO05D007081 3.1e-64 249.6 229 59.4
Actinidia38234 Actinidia chinensis HOM05D005673 ORTHO05D007081 4.0e-64 249.2 228 58.8
Actinidia03012 Actinidia chinensis HOM05D005673 ORTHO05D007081 8.9e-64 248.1 228 59.6
Thecc.10G064600 Theobroma cacao HOM05D005673 ORTHO05D007081 1.5e-63 247.3 230 60.0
CSS0045417 Camellia sinensis var. sinensis HOM05D005673 ORTHO05D007081 2.6e-63 246.5 190 65.8
Potri.008G046400 Populus trichocarpa HOM05D005673 ORTHO05D007081 5.8e-63 245.4 190 63.2
CSS0019421 Camellia sinensis var. sinensis HOM05D005673 ORTHO05D007081 7.5e-63 245.0 229 59.4
Ciclev10032487m.g Citrus clementina HOM05D005673 ORTHO05D007081 2.9e-62 243.0 228 58.8
Lj1A926T37 Lonicera japonica HOM05D005673 ORTHO05D007081 2.9e-62 243.0 194 64.9
Lj1A928T62 Lonicera japonica HOM05D005673 ORTHO05D007081 2.9e-62 243.0 194 64.9
Dinv25934 Davidia involucrata HOM05D005673 ORTHO05D007081 1.1e-61 241.1 163 73.0
Sabra08G0032600 Salix brachista HOM05D005673 ORTHO05D007081 1.4e-61 240.7 190 62.1
QL08p057314 Quercus lobata HOM05D005673 ORTHO05D007081 3.2e-61 239.6 228 57.5
GSVIVG01032643001 Vitis vinifera HOM05D005673 ORTHO05D007081 1.2e-60 237.7 190 63.7
COL.COLO4_08204 Corchorus olitorius HOM05D005673 ORTHO05D007081 2.1e-60 236.9 230 57.8
MD01G1114500 Malus domestica HOM05D005673 ORTHO05D007081 2.7e-60 236.5 222 60.4
Nitab4.5_0002078g0030 Nicotiana tabacum HOM05D005673 ORTHO05D007081 2.7e-60 236.5 190 62.1
Gorai.010G203600 Gossypium raimondii HOM05D005673 ORTHO05D007081 4.6e-60 235.7 226 59.3
Gohir.D06G174000 Gossypium hirsutum HOM05D005673 ORTHO05D007081 6.0e-60 235.3 238 57.6
Nitab4.5_0000575g0020 Nicotiana tabacum HOM05D005673 ORTHO05D007081 7.8e-60 235.0 190 61.6
TWI38G1168 Tripterygium wilfordii HOM05D005673 ORTHO05D007081 7.8e-60 235.0 190 61.1
Duzib114G0197 Durio zibethinus HOM05D005673 ORTHO05D007081 1.5e-58 230.7 230 57.0
CAN.G551.89 Capsicum annuum HOM05D005673 ORTHO05D007081 1.9e-58 230.3 190 61.1
CANSAT11G2273 Cannabis sativa HOM05D005673 ORTHO05D007081 5.6e-58 228.8 228 56.1
Gohir.A06G179004 Gossypium hirsutum HOM05D005673 ORTHO05D007081 7.3e-58 228.4 226 58.0
TAR623G0755 Trochodendron aralioides HOM05D005673 ORTHO05D007081 2.8e-57 226.5 189 65.1
MD07G1182600 Malus domestica HOM05D005673 ORTHO05D007081 3.6e-57 226.1 190 65.3
Sopen12g004500 Solanum pennellii HOM05D005673 ORTHO05D007081 4.7e-57 225.7 190 60.5
AUR62041616 Chenopodium quinoa HOM05D005673 ORTHO05D007081 8.1e-57 224.9 219 53.4
Cfa001572 Carpinus fangiana HOM05D005673 ORTHO05D007081 1.1e-56 224.6 230 53.5
AUR62036006 Chenopodium quinoa HOM05D005673 ORTHO05D007081 1.1e-56 224.6 218 55.0
Solyc12g009500.2 Solanum lycopersicum HOM05D005673 ORTHO05D007081 1.1e-56 224.6 190 60.0
Ah.16g108000 Amaranthus hybridus HOM05D005673 ORTHO05D007081 1.8e-56 223.8 221 53.4
Rhsim03G0121300 Rhododendron simsii HOM05D005673 ORTHO05D007081 3.1e-56 223.0 190 62.1
CiPaw.02G177700 Carya illinoinensis HOM05D005673 ORTHO05D007081 5.2e-56 222.2 210 56.2
Haze_16957 Corylus avellana HOM05D005673 ORTHO05D007081 6.8e-56 221.9 230 52.6
Lalb_Chr19g0126251 Lupinus albus HOM05D005673 ORTHO05D007081 6.8e-56 221.9 224 53.1
Hund22450 Selenicereus undatus HOM05D005673 ORTHO05D007081 1.2e-55 221.1 227 51.5
EL10Ac2g03532 Beta vulgaris HOM05D005673 ORTHO05D007081 2.6e-55 219.9 230 52.2
ECA233G0150 Erigeron canadensis HOM05D005673 ORTHO05D007081 2.6e-55 219.9 190 58.9
HanXRQChr08g0219361 Helianthus annuus HOM05D005673 ORTHO05D007081 2.6e-55 219.9 188 59.0
Cc09_g02320 Coffea canephora HOM05D005673 ORTHO05D007081 7.6e-55 218.4 229 52.4
PGSC0003DMG400002916 Solanum tuberosum HOM05D005673 ORTHO05D007081 7.6e-55 218.4 190 58.9
SGA_v2.0_scaffold62G21443 Striga asiatica HOM05D005673 ORTHO05D007081 9.9e-55 218.0 225 49.8
Lsat_1_v5_gn_8_21281 Lactuca sativa HOM05D005673 ORTHO05D007081 2.2e-54 216.9 190 56.8
ClCG02G013770 Citrullus lanatus HOM05D005673 ORTHO05D007081 8.4e-54 214.9 185 57.3
PGR142G2170 Punica granatum HOM05D005673 ORTHO05D007081 1.1e-53 214.5 230 49.6
Hma1.2p1_0348F.1_g131860 Hydrangea macrophylla HOM05D005673 ORTHO05D007081 1.4e-53 214.2 146 70.5
MSTRG.9191 Avicennia marina HOM05D005673 ORTHO05D007081 2.4e-53 213.4 188 55.3
SalBow4G0159 Salvia bowleyana HOM05D005673 ORTHO05D007081 3.2e-53 213.0 188 55.9
CsaV3_5G006400 Cucumis sativus L. HOM05D005673 ORTHO05D007081 7.1e-53 211.8 190 55.3
MELO3C011718.2 Cucumis melo HOM05D005673 ORTHO05D007081 9.2e-53 211.5 190 55.8
Atru.chr12.608 Acer truncatum HOM05D005673 ORTHO05D007081 1.2e-52 211.1 168 65.5
Lj1g0007847 Lotus japonicus HOM05D005673 ORTHO05D007081 2.1e-52 210.3 188 55.3
THA.LOC104825722 Tarenaya hassleriana HOM05D005673 ORTHO05D007081 2.7e-52 209.9 233 52.4
Ca_07421_v3 Cicer arietinum L. HOM05D005673 ORTHO05D007081 4.6e-52 209.1 183 56.8
Sed0006326 Sechium edule HOM05D005673 ORTHO05D007081 4.6e-52 209.1 228 50.0
AT4G10090 Arabidopsis thaliana HOM05D005673 ORTHO05D007081 1.3e-51 207.6 192 53.6
Cfa005598 Carpinus fangiana HOM05D005673 ORTHO05D007081 1.3e-51 207.6 230 50.9
CARHR261110 Cardamine hirsuta HOM05D005673 ORTHO05D007081 2.3e-51 206.8 192 54.7
AL6G43874 Arabidopsis lyrata HOM05D005673 ORTHO05D007081 1.5e-50 204.1 232 48.3
Carub.0006s2866 Capsella rubella HOM05D005673 ORTHO05D007081 1.5e-50 204.1 232 48.7
Thhalv10028887m.g Eutrema salsugineum HOM05D005673 ORTHO05D007081 1.5e-50 204.1 233 49.4
BcaC04g21010 Brassica carinata HOM05D005673 ORTHO05D007081 1.9e-50 203.8 185 56.8
C09p36690 Brassica napus HOM05D005673 ORTHO05D007081 1.9e-50 203.8 185 56.8
BolC9t56500H Brassica oleracea HOM05D005673 ORTHO05D007081 1.9e-50 203.8 185 56.8
Eucgr.G02786 Eucalyptus grandis HOM05D005673 ORTHO05D007081 1.9e-50 203.8 185 56.8
BcaB01g01447 Brassica carinata HOM05D005673 ORTHO05D007081 4.3e-50 202.6 234 48.7
Atru.BG.271.p Acer truncatum HOM05D005673 ORTHO05D007081 7.3e-50 201.8 148 67.6
A09p28870 Brassica napus HOM05D005673 ORTHO05D007081 9.6e-50 201.4 185 55.7
Sp6g07430 Schrenkiella parvula HOM05D005673 ORTHO05D007081 9.6e-50 201.4 192 51.6
arahy.Tifrunner.gnm1.ann1.R12QR1 Arachis hypogaea HOM05D005673 ORTHO05D007081 1.6e-49 200.7 185 54.6
Prupe.2G221200 Prunus persica HOM05D005673 ORTHO05D007081 2.1e-49 200.3 187 58.8
TPR.G10191 Trifolium pratense HOM05D005673 ORTHO05D007081 3.6e-49 199.5 226 49.6
arahy.Tifrunner.gnm1.ann1.YNZN7C Arachis hypogaea HOM05D005673 ORTHO05D007081 8.1e-49 198.4 185 54.6
CDE04G2944 Ceratophyllum demersum HOM05D005673 ORTHO05D007081 8.1e-49 198.4 181 54.7
vmacro07099 Vaccinium macrocarpon HOM05D005673 ORTHO05D007081 4.0e-48 196.1 178 61.2
Aa31LG9G11910 Aethionema arabicum HOM05D005673 ORTHO05D007081 8.9e-48 194.9 192 51.6
Peaxi162Scf00170g00413 Petunia axillaris HOM05D005673 ORTHO05D007081 2.6e-47 193.4 185 55.1
MD00G1166800 Malus domestica HOM05D005673 ORTHO05D007081 7.6e-47 191.8 182 57.7
Glyma.08G340700 Glycine max HOM05D005673 ORTHO05D007081 1.3e-46 191.0 185 53.5
Migut.F02013 Erythranthe guttata HOM05D005673 ORTHO05D007081 2.2e-46 190.3 230 49.1
HPP92_012063 Vanilla planifolia HOM05D005673 ORTHO05D007081 5.4e-45 185.7 236 44.9
Sc20g0002250 Simmondsia chinensis HOM05D005673 ORTHO05D007081 9.3e-45 184.9 191 49.7
SGA_v2.0_scaffold17G08196 Striga asiatica HOM05D005673 ORTHO05D007081 3.5e-44 183.0 159 55.3
DCAR_015256 Daucus carota HOM05D005673 ORTHO05D007081 3.0e-43 179.9 289 41.2
Os03g0284000 Oryza sativa ssp. japonica HOM05D005673 ORTHO05D007081 3.9e-43 179.5 186 51.6
Phvul.008G138600 Phaseolus vulgaris HOM05D005673 ORTHO05D007081 1.1e-42 177.9 184 53.3
Zm00001eb378810 Zea mays HOM05D005673 ORTHO05D007081 1.1e-42 177.9 186 51.1
Oeu008278.1 Olea europaea HOM05D005673 ORTHO05D007081 4.8e-41 172.6 158 57.0
Medtr7g047440 Medicago truncatula HOM05D005673 ORTHO05D007081 2.4e-40 170.2 155 54.8
Medtr7g451610 Medicago truncatula HOM05D005673 ORTHO05D007081 2.4e-40 170.2 155 54.8
Medtr7g451710 Medicago truncatula HOM05D005673 ORTHO05D007081 2.4e-40 170.2 155 54.8
HPP92_012075 Vanilla planifolia HOM05D005673 ORTHO05D007081 2.6e-39 166.8 152 54.6
VMungo1383G1385 Vigna mungo HOM05D005673 ORTHO05D007081 2.2e-38 163.7 160 52.5
unitig_37.g12298 Utricularia gibba HOM05D005673 ORTHO05D007081 6.2e-33 145.6 124 54.0
Psat0s9937g0040 Pisum sativum HOM05D005673 ORTHO05D007081 2.4e-32 143.7 110 64.5
Psat3g152960 Pisum sativum HOM05D005673 ORTHO05D007081 4.9e-30 136.0 119 58.0
Mapoly0003s0199 Marchantia polymorpha HOM05D005673 ORTHO05D007081 4.6e-28 129.4 201 39.3
SMO347G0616 Selaginella moellendorffii HOM05D005673 ORTHO05D007081 2.6e-23 113.6 157 39.5
Pp3c2_31740 Physcomitrium patens HOM05D005673 ORTHO05D007081 1.3e-22 111.3 207 32.9
AagrBONN_evm.TU.Sc2ySwM_362.1467 Anthoceros agrestis HOM05D005673 ORTHO05D007081 4.6e-20 102.8 198 33.3
HanXRQChr02g0043631 Helianthus annuus HOM05D005673 ORTHO05D007081 8.7e-19 98.6 97 50.5
CBR_g23354 Chara braunii HOM05D005673 ORTHO05D007081 1.7e-14 84.3 193 32.6
Cpa.g.sc5360.1 Carica papaya HOM05D005673 ORTHO05D007081 4.2e-13 79.7 48 77.1
HanXRQChr13g0394111 Helianthus annuus HOM05D005673 ORTHO05D007081 4.6e-12 76.3 67 55.2
Aqoxy4G03136 Aquilegia oxysepala HOM05D005673 ORTHO05D007081 1.8e-08 64.3 44 65.9
PSO713G0026 Papaver somniferum HOM05D005673 ORTHO05D007081 1.2e-07 61.6 99 38.4


User provided reference genes

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