Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g10181 Nelumbo nucifera HOM05D005573 ORTHO05D007161 3.6e-109 398.3 202 100.0
Nn1g10183 Nelumbo nucifera HOM05D005573 ORTHO05D007161 3.6e-109 398.3 202 100.0
PSO548G0019 Papaver somniferum HOM05D005573 ORTHO05D007161 1.6e-101 372.9 202 94.6
PGR111G0074 Punica granatum HOM05D005573 ORTHO05D007161 3.6e-101 371.7 202 92.6
Hma1.2p1_0248F.1_g102160 Hydrangea macrophylla HOM05D005573 ORTHO05D007161 4.7e-101 371.3 202 94.1
Lsat_1_v5_gn_3_99201 Lactuca sativa HOM05D005573 ORTHO05D007161 9.7e-99 363.6 202 91.6
CAN.G551.66 Capsicum annuum HOM05D005573 ORTHO05D007161 1.3e-98 363.2 202 91.1
CAN.G65.126 Capsicum annuum HOM05D005573 ORTHO05D007161 1.3e-98 363.2 202 91.1
HanXRQChr02g0041471 Helianthus annuus HOM05D005573 ORTHO05D007161 2.2e-98 362.5 202 92.1
HanXRQChr02g0044961 Helianthus annuus HOM05D005573 ORTHO05D007161 2.2e-98 362.5 202 92.1
HanXRQChr07g0201021 Helianthus annuus HOM05D005573 ORTHO05D007161 2.2e-98 362.5 202 92.1
HanXRQChr08g0210291 Helianthus annuus HOM05D005573 ORTHO05D007161 2.2e-98 362.5 202 92.1
HanXRQChr10g0289201 Helianthus annuus HOM05D005573 ORTHO05D007161 2.2e-98 362.5 202 92.1
HanXRQChr11g0326731 Helianthus annuus HOM05D005573 ORTHO05D007161 2.2e-98 362.5 202 92.1
HanXRQCPg0579941 Helianthus annuus HOM05D005573 ORTHO05D007161 2.2e-98 362.5 202 92.1
Migut.D01426 Erythranthe guttata HOM05D005573 ORTHO05D007161 3.7e-98 361.7 202 90.6
Gohir.A08G157500 Gossypium hirsutum HOM05D005573 ORTHO05D007161 5.3e-97 357.8 202 90.1
DCAR_032486 Daucus carota HOM05D005573 ORTHO05D007161 7.0e-97 357.5 202 90.1
CAN.G1183.7 Capsicum annuum HOM05D005573 ORTHO05D007161 9.1e-97 357.1 202 89.6
arahy.Tifrunner.gnm1.ann1.DMW7HF Arachis hypogaea HOM05D005573 ORTHO05D007161 1.2e-96 356.7 202 88.6
Sed0002328 Sechium edule HOM05D005573 ORTHO05D007161 2.0e-96 355.9 202 90.1
Sed0008322 Sechium edule HOM05D005573 ORTHO05D007161 2.0e-96 355.9 202 90.1
SalBow1G4134 Salvia bowleyana HOM05D005573 ORTHO05D007161 2.2e-95 352.4 202 89.1
CARHR282030 Cardamine hirsuta HOM05D005573 ORTHO05D007161 1.1e-94 350.1 202 89.6
A06p23260 Brassica napus HOM05D005573 ORTHO05D007161 7.2e-94 347.4 202 88.6
BNapus_Darmor_BZH_scaffold_287p00070 Brassica napus HOM05D005573 ORTHO05D007161 7.2e-94 347.4 202 88.6
BolSC45t60866H Brassica oleracea HOM05D005573 ORTHO05D007161 7.2e-94 347.4 202 88.6
BolSC45t60946H Brassica oleracea HOM05D005573 ORTHO05D007161 7.2e-94 347.4 202 88.6
BolSC46t60993H Brassica oleracea HOM05D005573 ORTHO05D007161 7.2e-94 347.4 202 88.6
BolSC46t61042H Brassica oleracea HOM05D005573 ORTHO05D007161 7.2e-94 347.4 202 88.6
BraA06t25428Z Brassica rapa HOM05D005573 ORTHO05D007161 7.2e-94 347.4 202 88.6
BraSC140t45578Z Brassica rapa HOM05D005573 ORTHO05D007161 7.2e-94 347.4 202 88.6
BraSC151t45711Z Brassica rapa HOM05D005573 ORTHO05D007161 7.2e-94 347.4 202 88.6
AL2G20730 Arabidopsis lyrata HOM05D005573 ORTHO05D007161 1.2e-93 346.7 202 89.1
Medtr4g051220 Medicago truncatula HOM05D005573 ORTHO05D007161 2.1e-93 345.9 202 87.6
EL10As27g24246 Beta vulgaris HOM05D000216 ORTHO05D007161 2.7e-93 345.5 202 87.6
ATCG00380 Arabidopsis thaliana HOM05D005573 ORTHO05D007161 4.7e-93 344.7 202 88.6
AL2G21420 Arabidopsis lyrata HOM05D005573 ORTHO05D007161 6.1e-93 344.4 202 88.6
LjContig00318g0014176 Lotus japonicus HOM05D005573 ORTHO05D007161 8.0e-93 344.0 202 86.6
BolSC49t61189H Brassica oleracea HOM05D005573 ORTHO05D007161 3.1e-89 332.0 204 86.3
Lj2P1237T91 Lonicera japonica HOM05D005573 ORTHO05D007161 4.1e-89 331.6 204 86.8
Lj2P1239T179 Lonicera japonica HOM05D005573 ORTHO05D007161 4.1e-89 331.6 204 86.8
Gohir.D04G083800 Gossypium hirsutum HOM05D005573 ORTHO05D007161 1.5e-86 323.2 202 83.7
Zm00001eb039080 Zea mays HOM05D005573 ORTHO05D007161 7.2e-86 320.9 202 80.2
Zm00001eb039210 Zea mays HOM05D005573 ORTHO05D007161 7.2e-86 320.9 202 80.2
Zm00001eb435020 Zea mays HOM05D005573 ORTHO05D007161 7.2e-86 320.9 202 80.2
Zm00001eb435220 Zea mays HOM05D005573 ORTHO05D007161 7.2e-86 320.9 202 80.2
Zm00001eb435420 Zea mays HOM05D005573 ORTHO05D007161 7.2e-86 320.9 202 80.2
Zm00001eb435680 Zea mays HOM05D005573 ORTHO05D007161 7.2e-86 320.9 202 80.2
Zm00001eb440990 Zea mays HOM05D005573 ORTHO05D007161 7.2e-86 320.9 202 80.2
Oeu012806.1 Olea europaea HOM05D005573 ORTHO05D007161 3.6e-85 318.5 199 82.4
Lj4g0013543 Lotus japonicus HOM05D005573 ORTHO05D007161 1.0e-84 317.0 202 82.2
Glyma.01G153400 Glycine max HOM05D005573 ORTHO05D007161 2.2e-82 309.3 185 82.2
EL10As12g24021 Beta vulgaris HOM05D005573 ORTHO05D007161 5.4e-81 304.7 200 78.0
PGSC0003DMG400024039 Solanum tuberosum HOM05D005573 ORTHO05D007161 9.1e-81 303.9 182 86.8
Gorai.006G201300 Gossypium raimondii HOM05D005573 ORTHO05D007161 1.5e-78 296.6 182 84.6
Gohir.D09G179300 Gossypium hirsutum HOM05D005573 ORTHO05D007161 7.2e-78 294.3 182 84.1
Medtr0002s0590 Medicago truncatula HOM05D005573 ORTHO05D007161 3.7e-74 282.0 182 77.5
C09p29560 Brassica napus HOM05D005573 ORTHO05D007161 8.6e-71 270.8 155 89.7
Zm00001eb039100 Zea mays HOM05D005573 ORTHO05D007161 2.5e-70 269.2 172 79.1
Thhalv10010766m.g Eutrema salsugineum HOM05D005573 ORTHO05D007161 2.8e-69 265.8 202 72.3
Zm00001eb231240 Zea mays HOM05D005573 ORTHO05D007161 4.0e-68 261.9 177 75.7
Solyc09g015330.2 Solanum lycopersicum HOM05D005573 ORTHO05D007161 4.1e-65 251.9 156 84.6
Lalb_Chr07g0191491 Lupinus albus HOM05D005573 ORTHO05D007161 7.0e-65 251.1 151 86.1
TWI60G0396 Tripterygium wilfordii HOM05D005573 ORTHO05D007161 1.7e-63 246.5 138 89.1
SEGI_18745 Sequoiadendron giganteum HOM05D005573 ORTHO05D007161 2.3e-63 246.1 208 64.4
Nitab4.5_0006596g0030 Nicotiana tabacum HOM05D005573 ORTHO05D007161 6.6e-63 244.6 148 85.8
Gohir.A09G103300 Gossypium hirsutum HOM05D005573 ORTHO05D007161 2.1e-61 239.6 148 85.8
Nn2g13212 Nelumbo nucifera HOM05D005573 ORTHO05D007161 3.4e-59 232.3 114 100.0
Nn423s46610 Nelumbo nucifera HOM05D005573 ORTHO05D007161 3.4e-59 232.3 114 100.0
GSVIVG01021975001 Vitis vinifera HOM05D005573 ORTHO05D007161 2.2e-58 229.6 132 90.2
Nn6g33243 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.4e-57 226.9 114 97.4
Eucgr.B02956 Eucalyptus grandis HOM05D005573 ORTHO05D007161 4.3e-54 215.3 114 90.4
HanXRQChr13g0413641 Helianthus annuus HOM05D005573 ORTHO05D007161 1.4e-52 210.3 114 92.1
HanXRQChr13g0413711 Helianthus annuus HOM05D005573 ORTHO05D007161 1.4e-52 210.3 114 92.1
HanXRQChr13g0413781 Helianthus annuus HOM05D005573 ORTHO05D007161 1.4e-52 210.3 114 92.1
HanXRQChr13g0413861 Helianthus annuus HOM05D005573 ORTHO05D007161 1.4e-52 210.3 114 92.1
HanXRQChr13g0413931 Helianthus annuus HOM05D005573 ORTHO05D007161 1.4e-52 210.3 114 92.1
arahy.Tifrunner.gnm1.ann1.NT5R3P Arachis hypogaea HOM05D005573 ORTHO05D007161 1.5e-51 206.8 149 73.8
Gohir.A10G100366 Gossypium hirsutum HOM05D005573 ORTHO05D007161 2.0e-51 206.5 114 88.6
CDE08G0454 Ceratophyllum demersum HOM05D000219 ORTHO05D000226 9.9e-51 204.1 114 89.5
Gohir.A07G163636 Gossypium hirsutum HOM05D005573 ORTHO05D007161 1.4e-49 200.3 114 86.8
Zm00001eb438350 Zea mays HOM05D005573 ORTHO05D007161 1.7e-47 193.4 114 81.6
CAN.G1478.12 Capsicum annuum HOM05D005573 ORTHO05D007161 6.6e-47 191.4 103 91.3
Oeu062838.1 Olea europaea HOM05D005573 ORTHO05D007161 1.1e-46 190.7 129 79.8
Potri.013G163300 Populus trichocarpa HOM05D005573 ORTHO05D007161 1.9e-46 189.9 103 89.3
Nn5g30925 Nelumbo nucifera HOM05D005573 ORTHO05D007161 2.8e-45 186.0 90 100.0
Solyc09g015310.3 Solanum lycopersicum HOM05D005573 ORTHO05D007161 1.4e-44 183.7 102 86.3
CAN.G129.6 Capsicum annuum HOM05D005573 ORTHO05D007161 2.4e-44 183.0 103 87.4
Lalb_Chr15g0080691 Lupinus albus HOM05D005573 ORTHO05D007161 5.2e-44 181.8 103 84.5
ClCG00G003940 Citrullus lanatus HOM05D005573 ORTHO05D007161 2.6e-43 179.5 101 92.1
CAN.G100.47 Capsicum annuum HOM05D005573 ORTHO05D007161 4.9e-42 175.3 103 83.5
BraSC25t45875Z Brassica rapa HOM05D005573 ORTHO05D007161 1.9e-41 173.3 103 83.5
Phvul.008G150500 Phaseolus vulgaris HOM05D005573 ORTHO05D007161 2.7e-40 169.5 94 81.9
Phvul.011G056580 Phaseolus vulgaris HOM05D005573 ORTHO05D007161 4.3e-38 162.2 101 82.2
Migut.D01353 Erythranthe guttata HOM05D005573 ORTHO05D007161 2.4e-36 156.4 141 62.4
SMO086G0035 Selaginella moellendorffii HOM05D005573 ORTHO05D007161 3.8e-34 149.1 190 46.8
SMO086G0038 Selaginella moellendorffii HOM05D005573 ORTHO05D007161 3.8e-34 149.1 190 46.8
TAR625G0941 Trochodendron aralioides HOM05D005573 ORTHO05D007161 6.4e-34 148.3 75 93.3
Zm00001eb434930 Zea mays HOM05D005573 ORTHO05D007161 1.1e-33 147.5 89 78.7
arahy.Tifrunner.gnm1.ann1.NAZW4C Arachis hypogaea HOM05D005573 ORTHO05D007161 3.9e-31 139.0 104 70.2
BolC9t56936H Brassica oleracea HOM05D005573 ORTHO05D007161 9.6e-30 134.4 77 88.3
Gohir.A09G045446 Gossypium hirsutum HOM05D005573 ORTHO05D007161 4.8e-29 132.1 72 90.3
CAN.G63.13 Capsicum annuum HOM05D005573 ORTHO05D007161 5.3e-28 128.6 77 80.5
SEGI_40009 Sequoiadendron giganteum HOM05D005573 ORTHO05D007161 9.0e-28 127.9 108 65.7
Gohir.A09G045300 Gossypium hirsutum HOM05D005573 ORTHO05D007161 1.2e-27 127.5 69 92.8
CiPaw.12G056900 Carya illinoinensis HOM05D005573 ORTHO05D007161 1.5e-27 127.1 68 89.7
Oeu056456.1 Olea europaea HOM05D005573 ORTHO05D007161 1.5e-27 127.1 66 90.9
HanXRQChr00c0345g0573881 Helianthus annuus HOM05D005573 ORTHO05D007161 3.4e-27 125.9 67 92.5
BolSC47t61119H Brassica oleracea HOM05D005573 ORTHO05D007161 1.4e-25 120.6 64 93.8
CAN.G653.3 Capsicum annuum HOM05D005573 ORTHO05D007161 3.2e-25 119.4 64 92.2
BolSC29t60458H Brassica oleracea HOM05D005573 ORTHO05D007161 1.2e-24 117.5 74 78.4
BolSC47t61104H Brassica oleracea HOM05D005573 ORTHO05D007161 1.2e-24 117.5 74 78.4
Nn071s42388 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.6e-24 117.1 90 78.9
TAR375G0006 Trochodendron aralioides HOM05D005573 ORTHO05D007161 2.1e-24 116.7 61 91.8
Solyc11g022610.1 Solanum lycopersicum HOM05D005573 ORTHO05D007161 3.0e-23 112.8 76 80.3
CAN.G331.1 Capsicum annuum HOM05D005573 ORTHO05D007161 5.1e-23 112.1 65 81.5
Sc09g0006540 Simmondsia chinensis HOM05D005573 ORTHO05D005696 6.7e-23 111.7 79 75.9
BolC7t41664H Brassica oleracea HOM05D005573 ORTHO05D007161 8.1e-21 104.8 71 71.8
Mapoly0090s0058 Marchantia polymorpha HOM05D005573 ORTHO05D007161 2.0e-19 100.1 66 72.7
Nn055s41940 Nelumbo nucifera HOM05D005573 ORTHO05D007161 2.5e-17 93.2 59 79.7
MELO3C027485.2 Cucumis melo HOM05D005573 ORTHO05D007161 4.2e-17 92.4 50 88.0
Oeu052069.1 Olea europaea HOM05D005573 ORTHO05D007161 4.2e-17 92.4 109 53.2
MELO3C022836.2 Cucumis melo HOM05D005573 ORTHO05D007161 1.2e-16 90.9 49 87.8
Solyc11g022620.1 Solanum lycopersicum HOM05D005573 ORTHO05D007161 1.8e-15 87.0 55 74.5
Nn021s41552 Nelumbo nucifera HOM05D005573 ORTHO05D007161 3.9e-15 85.9 41 100.0
Oeu042745.1 Olea europaea HOM05D005573 ORTHO05D007161 1.1e-14 84.3 104 51.9
Nitab4.5_0000261g0250 Nicotiana tabacum HOM05D005573 ORTHO05D007161 4.3e-14 82.4 42 90.5
HanXRQChr13g0413681 Helianthus annuus HOM05D005573 ORTHO05D029920 2.1e-13 80.1 45 84.4
HanXRQChr13g0413751 Helianthus annuus HOM05D005573 ORTHO05D029920 2.1e-13 80.1 45 84.4
HanXRQChr13g0413831 Helianthus annuus HOM05D005573 ORTHO05D029920 2.1e-13 80.1 45 84.4
HanXRQChr13g0413901 Helianthus annuus HOM05D005573 ORTHO05D029920 2.1e-13 80.1 45 84.4
BraSC25t45840Z Brassica rapa HOM05D005573 ORTHO05D007161 6.2e-13 78.6 52 82.7
Nn055s41939 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.1e-12 77.8 37 100.0
Oeu041772.1 Olea europaea HOM05D005573 ORTHO05D007161 4.1e-12 75.9 59 69.5
ClCG11G007200 Citrullus lanatus HOM05D005573 ORTHO05D007161 4.5e-11 72.4 46 73.9
BolSC29t60581H Brassica oleracea HOM05D005573 ORTHO05D007161 1.9e-09 67.0 36 94.4
Glyma.18G203700 Glycine max HOM05D005573 ORTHO05D007161 1.2e-08 64.3 40 80.0
BolC9t55817H Brassica oleracea HOM05D005573 ORTHO05D007161 2.1e-08 63.5 48 72.9
Gorai.006G198900 Gossypium raimondii HOM05D005573 ORTHO05D007161 3.9e-07 59.3 33 75.8


User provided reference genes

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