Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g09996 Nelumbo nucifera HOM05D004291 ORTHO05D005620 6.8e-81 303.9 150 100.0
Nn1g10097 Nelumbo nucifera HOM05D004291 ORTHO05D005620 6.8e-81 303.9 150 100.0
Nn1g09987 Nelumbo nucifera HOM05D004291 ORTHO05D005620 2.3e-44 182.6 91 97.8
Cfa021332 Carpinus fangiana HOM05D004291 ORTHO05D005620 3.3e-43 178.7 91 95.6
RcHm_v2.0_MTg0498241 Rosa chinensis HOM05D004291 ORTHO05D005620 8.1e-42 174.1 89 93.3
RcHm_v2.0_MTg0498571 Rosa chinensis HOM05D004291 ORTHO05D005620 8.1e-42 174.1 89 93.3
CANSAT16G0053 Cannabis sativa HOM05D004291 ORTHO05D005620 1.1e-41 173.7 91 92.3
Ca_03780_v3 Cicer arietinum L. HOM05D004291 ORTHO05D005620 1.4e-41 173.3 88 94.3
TPR.G581 Trifolium pratense HOM05D004291 ORTHO05D005620 1.4e-41 173.3 88 94.3
Gorai.001G161700 Gossypium raimondii HOM05D004291 ORTHO05D005620 2.4e-41 172.6 91 92.3
HanXRQMTg0579681 Helianthus annuus HOM05D004291 ORTHO05D005620 2.4e-41 172.6 91 92.3
Lsat_1_v5_gn_4_50261 Lactuca sativa HOM05D004291 ORTHO05D005620 2.4e-41 172.6 91 92.3
LjContig00315g0005262 Lotus japonicus HOM05D004291 ORTHO05D005620 2.4e-41 172.6 88 93.2
LjContig00315g0005528 Lotus japonicus HOM05D004291 ORTHO05D005620 2.4e-41 172.6 88 93.2
Lj5g0026615 Lotus japonicus HOM05D004291 ORTHO05D005620 4.0e-41 171.8 88 92.0
Psat3g172200 Pisum sativum HOM05D004291 ORTHO05D005620 4.0e-41 171.8 88 93.2
HanXRQChr04g0112911 Helianthus annuus HOM05D004291 ORTHO05D005620 1.5e-40 169.9 91 90.1
Solyc00g500310.1 Solanum lycopersicum HOM05D004291 ORTHO05D005620 1.5e-40 169.9 91 89.0
Solyc00g500101.1 Solanum lycopersicum HOM05D004291 ORTHO05D005620 2.6e-40 169.1 91 89.0
Solyc00g500118.1 Solanum lycopersicum HOM05D004291 ORTHO05D005620 2.6e-40 169.1 91 89.0
Solyc00g500244.1 Solanum lycopersicum HOM05D004291 ORTHO05D005620 2.6e-40 169.1 91 89.0
Solyc00g500275.1 Solanum lycopersicum HOM05D004291 ORTHO05D005620 2.6e-40 169.1 91 89.0
Solyc00g500359.1 Solanum lycopersicum HOM05D004291 ORTHO05D005620 2.6e-40 169.1 91 89.0
Sopen00g002770 Solanum pennellii HOM05D004291 ORTHO05D005620 2.6e-40 169.1 91 89.0
AUR62042349 Chenopodium quinoa HOM05D004291 ORTHO05D005620 3.4e-40 168.7 91 89.0
Lalb_Chr00c21g0405651 Lupinus albus HOM05D004291 ORTHO05D005620 3.4e-40 168.7 87 92.0
Lalb_Chr00c24g0407111 Lupinus albus HOM05D004291 ORTHO05D005620 3.4e-40 168.7 87 92.0
Sed0009617 Sechium edule HOM05D004291 ORTHO05D005620 3.4e-40 168.7 91 90.1
Ah.10g028620 Amaranthus hybridus HOM05D004291 ORTHO05D005620 2.2e-39 166.0 91 86.8
Ah.10g028820 Amaranthus hybridus HOM05D004291 ORTHO05D005620 2.2e-39 166.0 91 86.8
ATMG00160 Arabidopsis thaliana HOM05D004291 ORTHO05D005620 2.2e-39 166.0 91 87.9
CARHR282690 Cardamine hirsuta HOM05D004291 ORTHO05D005620 2.2e-39 166.0 91 87.9
AUR62001626 Chenopodium quinoa HOM05D004291 ORTHO05D005620 2.2e-39 166.0 91 87.9
AT2G07695 Arabidopsis thaliana HOM05D004291 ORTHO05D005620 2.9e-39 165.6 89 88.8
ATMG01280 Arabidopsis thaliana HOM05D004291 ORTHO05D005620 2.9e-39 165.6 89 88.8
A04p09440 Brassica napus HOM05D004291 ORTHO05D005620 2.9e-39 165.6 89 88.8
A04p09530 Brassica napus HOM05D004291 ORTHO05D005620 2.9e-39 165.6 89 88.8
BolSC28t60319H Brassica oleracea HOM05D004291 ORTHO05D005620 2.9e-39 165.6 89 88.8
BolSC28t60374H Brassica oleracea HOM05D004291 ORTHO05D005620 2.9e-39 165.6 89 88.8
BraSC48t46334Z Brassica rapa HOM05D004291 ORTHO05D005620 2.9e-39 165.6 89 88.8
BraSC54t46353Z Brassica rapa HOM05D004291 ORTHO05D005620 2.9e-39 165.6 89 88.8
BraSC54t46371Z Brassica rapa HOM05D004291 ORTHO05D005620 2.9e-39 165.6 89 88.8
BraSC54t46377Z Brassica rapa HOM05D004291 ORTHO05D005620 2.9e-39 165.6 89 88.8
CARHR283480 Cardamine hirsuta HOM05D004291 ORTHO05D005620 2.9e-39 165.6 89 88.8
Thhalv10023011m.g Eutrema salsugineum HOM05D004291 ORTHO05D005620 2.9e-39 165.6 89 88.8
Lsat_1_v5_gn_6_95140 Lactuca sativa HOM05D004291 ORTHO05D005620 2.9e-39 165.6 91 89.0
CsaV3_5G015800 Cucumis sativus L. HOM05D004291 ORTHO05D005620 3.8e-39 165.2 91 87.9
Ca_31296_v3 Cicer arietinum L. HOM05D004291 ORTHO05D005620 6.4e-39 164.5 88 92.0
BraSC48t46243Z Brassica rapa HOM05D004291 ORTHO05D005620 5.4e-38 161.4 90 87.8
DCAR_032452 Daucus carota HOM05D004291 ORTHO05D005620 2.3e-36 156.0 84 89.3
RhsimMtG0001900 Rhododendron simsii HOM05D004291 ORTHO05D005620 3.9e-36 155.2 80 92.5
Thecc.10G006300 Theobroma cacao HOM05D004291 ORTHO05D005620 6.7e-36 154.5 91 82.4
SGA_v2.0_scaffold245G44781 Striga asiatica HOM05D004291 ORTHO05D005620 8.7e-36 154.1 87 85.1
arahy.Tifrunner.gnm1.ann1.4JQ3QL Arachis hypogaea HOM05D004291 ORTHO05D005620 5.6e-35 151.4 80 91.2
arahy.Tifrunner.gnm1.ann1.5E6QYU Arachis hypogaea HOM05D004291 ORTHO05D005620 5.6e-35 151.4 80 91.2
arahy.Tifrunner.gnm1.ann1.81GM5H Arachis hypogaea HOM05D004291 ORTHO05D005620 5.6e-35 151.4 80 91.2
arahy.Tifrunner.gnm1.ann1.86CJ1T Arachis hypogaea HOM05D004291 ORTHO05D005620 5.6e-35 151.4 80 91.2
arahy.Tifrunner.gnm1.ann1.8KX3ZR Arachis hypogaea HOM05D004291 ORTHO05D005620 5.6e-35 151.4 80 91.2
arahy.Tifrunner.gnm1.ann1.8LYJ6L Arachis hypogaea HOM05D004291 ORTHO05D005620 5.6e-35 151.4 80 91.2
arahy.Tifrunner.gnm1.ann1.C5IA5B Arachis hypogaea HOM05D004291 ORTHO05D005620 5.6e-35 151.4 80 91.2
arahy.Tifrunner.gnm1.ann1.E3XYYX Arachis hypogaea HOM05D004291 ORTHO05D005620 5.6e-35 151.4 80 91.2
arahy.Tifrunner.gnm1.ann1.JQU8UC Arachis hypogaea HOM05D004291 ORTHO05D005620 5.6e-35 151.4 80 91.2
arahy.Tifrunner.gnm1.ann1.K8XT55 Arachis hypogaea HOM05D004291 ORTHO05D005620 5.6e-35 151.4 80 91.2
arahy.Tifrunner.gnm1.ann1.NTK3LG Arachis hypogaea HOM05D004291 ORTHO05D005620 5.6e-35 151.4 80 91.2
arahy.Tifrunner.gnm1.ann1.Y9PUBE Arachis hypogaea HOM05D004291 ORTHO05D005620 5.6e-35 151.4 80 91.2
arahy.Tifrunner.gnm1.ann1.I3FVC7 Arachis hypogaea HOM05D004291 ORTHO05D005620 2.1e-34 149.4 78 91.0
Os04g0343050 Oryza sativa ssp. japonica HOM05D004291 ORTHO05D005620 4.0e-33 145.2 82 85.4
Hma1.2p1_0716F.1_g208040 Hydrangea macrophylla HOM05D004291 ORTHO05D005620 2.9e-31 139.0 74 89.2
Glyma.09G040100 Glycine max HOM05D004291 ORTHO05D005620 1.9e-30 136.3 82 80.5
SabraMtG0008700 Salix brachista HOM05D004291 ORTHO05D005620 3.5e-29 132.1 73 87.7
BraSC177t45746Z Brassica rapa HOM05D004291 ORTHO05D005620 7.9e-29 131.0 110 62.7
BraSC77t46631Z Brassica rapa HOM05D004291 ORTHO05D005620 1.1e-27 127.1 74 81.1
Phvul.009G252600 Phaseolus vulgaris HOM05D004291 ORTHO05D005620 9.6e-27 124.0 81 74.1
VMungo1309G0827 Vigna mungo HOM05D004291 ORTHO05D005620 1.3e-26 123.6 91 70.3
Nn1g09999 Nelumbo nucifera HOM05D004291 ORTHO05D005620 1.1e-25 120.6 91 70.3
Nn1g10072 Nelumbo nucifera HOM05D004291 ORTHO05D005620 1.1e-25 120.6 91 70.3
Hma1.2p1_0716F.1_g208050 Hydrangea macrophylla HOM05D004291 ORTHO05D005620 2.0e-24 116.3 61 91.8
Eucgr.I01856 Eucalyptus grandis HOM05D004291 ORTHO05D005620 4.5e-24 115.2 60 93.3
Sed0021216 Sechium edule HOM05D004291 ORTHO05D005620 8.4e-23 110.9 65 83.1
Medtr0212s0040 Medicago truncatula HOM05D000743 ORTHO05D000580 1.4e-22 110.2 83 73.5
GSVIVG01006909001 Vitis vinifera HOM05D004291 ORTHO05D005620 1.2e-21 107.1 56 92.9
CAN.G1173.2 Capsicum annuum HOM05D004291 ORTHO05D005620 3.5e-21 105.5 60 85.0
Potri.007G061781 Populus trichocarpa HOM05D004291 ORTHO05D005620 4.6e-21 105.1 59 88.1
BraSC48t46285Z Brassica rapa HOM05D004291 ORTHO05D005620 6.3e-18 94.7 46 91.3
ATR0461G002 Amborella trichopoda HOM05D004291 ORTHO05D005620 1.1e-17 94.0 54 83.3
BolSC28t60389H Brassica oleracea HOM05D004291 ORTHO05D005620 5.3e-17 91.7 44 90.9
BolSC28t60408H Brassica oleracea HOM05D004291 ORTHO05D005620 5.3e-17 91.7 44 90.9
ClCG06G009310 Citrullus lanatus HOM05D004291 ORTHO05D005620 5.9e-16 88.2 46 89.1
MBI05_g05354_MAGBIO Magnolia biondii HOM05D004291 ORTHO05D005620 1.9e-14 83.2 84 51.2
Cre03.g154350 Chlamydomonas reinhardtii HOM05D004291 ORTHO05D005620 7.9e-13 77.8 85 43.5
Peaxi162Scf00187g00115 Petunia axillaris HOM05D004291 ORTHO05D005620 5.1e-12 75.1 44 79.5
TAR371G1150 Trochodendron aralioides HOM05D004291 ORTHO05D005620 4.3e-11 72.0 36 94.4
Migut.J01259 Erythranthe guttata HOM05D004291 ORTHO05D005620 1.3e-10 70.5 40 82.5
Mapoly0007s0023 Marchantia polymorpha HOM05D004291 ORTHO05D005620 2.2e-07 59.7 29 86.2
Sc08g0004800 Simmondsia chinensis HOM05D004291 ORTHO05D005620 2.5e-06 56.2 34 67.6


User provided reference genes

Program Settings