Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g09957 Nelumbo nucifera HOM05D003666 ORTHO05D004770 8.3e-91 337.0 172 100.0
Nn1g09958 Nelumbo nucifera HOM05D003666 ORTHO05D004770 8.3e-91 337.0 172 100.0
Nn1g10168 Nelumbo nucifera HOM05D003666 ORTHO05D004770 8.3e-91 337.0 172 100.0
FAN09G4889 Fragaria x ananassa HOM05D003666 ORTHO05D004770 2.2e-83 312.4 172 94.8
RcHm_v2.0_MTg0498681 Rosa chinensis HOM05D003666 ORTHO05D004770 2.2e-83 312.4 172 94.8
Potri.007G061881 Populus trichocarpa HOM05D003666 ORTHO05D004770 1.1e-82 310.1 172 94.2
SabraMtG0002200 Salix brachista HOM05D003666 ORTHO05D004770 1.1e-82 310.1 172 94.2
Lj2A1228G70 Lonicera japonica HOM05D003666 ORTHO05D004770 5.4e-82 307.8 172 93.6
SHI36046 Sapria himalayana HOM05D003666 ORTHO05D004770 1.6e-81 306.2 172 93.0
Gorai.001G166300 Gossypium raimondii HOM05D003666 ORTHO05D004770 7.8e-81 303.9 172 93.0
Solyc00g500171.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 3.3e-79 298.5 172 92.4
Solyc00g500188.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 3.3e-79 298.5 172 92.4
Solyc00g500252.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 3.3e-79 298.5 172 92.4
Sopen11g018260 Solanum pennellii HOM05D003666 ORTHO05D004770 3.3e-79 298.5 172 92.4
CiPaw.06G021600 Carya illinoinensis HOM05D003666 ORTHO05D004770 2.1e-78 295.8 172 89.5
unitig_87.g28022 Utricularia gibba HOM05D003666 ORTHO05D004770 1.8e-77 292.7 159 94.3
Lj2A1223T77 Lonicera japonica HOM05D003666 ORTHO05D004770 2.2e-75 285.8 169 90.5
arahy.Tifrunner.gnm1.ann1.75QRLF Arachis hypogaea HOM05D003666 ORTHO05D004770 1.3e-72 276.6 158 92.4
arahy.Tifrunner.gnm1.ann1.ZBC6LT Arachis hypogaea HOM05D003666 ORTHO05D004770 1.3e-72 276.6 158 92.4
Lalb_Chr00c24g0407381 Lupinus albus HOM05D003666 ORTHO05D004770 1.3e-72 276.6 158 92.4
Lalb_Chr02g0154061 Lupinus albus HOM05D003666 ORTHO05D004770 6.6e-72 274.2 158 91.8
FAN09G2550 Fragaria x ananassa HOM05D003666 ORTHO05D004770 4.0e-69 265.0 155 89.7
Nitab4.5_0000085g0130 Nicotiana tabacum HOM05D003666 ORTHO05D004770 1.5e-68 263.1 164 85.4
TAR626G0972 Trochodendron aralioides HOM05D003666 ORTHO05D004770 1.3e-67 260.0 157 89.2
LjContig00439g0017912 Lotus japonicus HOM05D003666 ORTHO05D004770 1.9e-66 256.1 147 93.2
LjContig00439g0019818 Lotus japonicus HOM05D003666 ORTHO05D004770 1.9e-66 256.1 147 93.2
CDE02G3669 Ceratophyllum demersum HOM05D003666 ORTHO05D004770 9.2e-66 253.8 138 96.4
PSO210G0035 Papaver somniferum HOM05D003666 ORTHO05D004770 2.1e-65 252.7 142 94.4
Aa31csc553G70 Aethionema arabicum HOM05D003666 ORTHO05D004770 1.0e-64 250.4 147 91.8
C04p19570 Brassica napus HOM05D003666 ORTHO05D004770 1.0e-64 250.4 159 86.8
BraSC177t45766Z Brassica rapa HOM05D003666 ORTHO05D004770 1.0e-64 250.4 159 86.8
BraSC77t46648Z Brassica rapa HOM05D003666 ORTHO05D004770 1.0e-64 250.4 159 86.8
Sp3g25750 Schrenkiella parvula HOM05D003666 ORTHO05D004770 1.0e-64 250.4 159 86.8
CANSAT16G0036 Cannabis sativa HOM05D003666 ORTHO05D004770 1.7e-64 249.6 142 93.7
Sed0020058 Sechium edule HOM05D003666 ORTHO05D004770 3.9e-64 248.4 147 91.8
DCAR_032432 Daucus carota HOM05D003666 ORTHO05D004770 1.1e-63 246.9 143 92.3
Medtr0082s0090 Medicago truncatula HOM05D003666 ORTHO05D004770 2.5e-63 245.7 143 90.9
ATMG00580 Arabidopsis thaliana HOM05D003666 ORTHO05D004770 2.1e-62 242.7 142 91.5
FAN09G4847 Fragaria x ananassa HOM05D003666 ORTHO05D004770 8.1e-62 240.7 148 89.9
SHI12194 Sapria himalayana HOM05D003666 ORTHO05D004770 1.1e-61 240.4 159 83.0
BolC4t23491H Brassica oleracea HOM05D003666 ORTHO05D004770 9.0e-61 237.3 162 80.9
HanXRQMTg0579201 Helianthus annuus HOM05D003666 ORTHO05D004770 3.2e-58 228.8 142 88.0
Ca_14829_v3 Cicer arietinum L. HOM05D003666 ORTHO05D004770 4.2e-58 228.4 126 92.9
SEGI_01871 Sequoiadendron giganteum HOM05D003666 ORTHO05D004770 4.2e-58 228.4 152 82.9
SalBow1G6983 Salvia bowleyana HOM05D003666 ORTHO05D004770 5.4e-58 228.0 126 93.7
CiPaw.15G113100 Carya illinoinensis HOM05D003666 ORTHO05D004770 2.1e-57 226.1 172 72.1
HanXRQChr02g0045121 Helianthus annuus HOM05D003666 ORTHO05D004770 1.1e-55 220.3 142 85.9
Ah.10g028210 Amaranthus hybridus HOM05D003666 ORTHO05D004770 4.0e-53 211.8 129 87.6
Ah.10g028760 Amaranthus hybridus HOM05D003666 ORTHO05D004770 4.0e-53 211.8 129 87.6
Gohir.A08G104701 Gossypium hirsutum HOM05D003666 ORTHO05D004770 3.4e-52 208.8 126 86.5
Sed0023789 Sechium edule HOM05D003666 ORTHO05D004770 1.6e-49 199.9 147 78.2
Nitab4.5_0000172g1740 Nicotiana tabacum HOM05D003666 ORTHO05D004770 1.6e-46 189.9 146 76.0
Dinv06696 Davidia involucrata HOM05D003666 ORTHO05D016272 4.6e-41 171.8 92 94.6
Lalb_Chr00c54g0413591 Lupinus albus HOM05D003666 ORTHO05D004770 4.0e-37 158.7 145 68.3
Lsat_1_v5_gn_4_39621 Lactuca sativa HOM05D003666 ORTHO05D004770 5.3e-37 158.3 96 87.5
Lsat_1_v5_gn_3_108200 Lactuca sativa HOM05D003666 ORTHO05D004770 1.5e-36 156.8 96 86.5
SMO053G0008 Selaginella moellendorffii HOM05D003666 ORTHO05D004770 1.4e-29 133.7 173 50.3
BcaC05g26876 Brassica carinata HOM05D003666 ORTHO05D004770 5.3e-29 131.7 77 89.6
Nitab4.5_0000172g1340 Nicotiana tabacum HOM05D003666 ORTHO05D004770 5.3e-29 131.7 82 85.4
Migut.L00682 Erythranthe guttata HOM05D003666 ORTHO05D004770 4.2e-26 122.1 104 70.2
TAR022G0002 Trochodendron aralioides HOM05D003666 ORTHO05D004770 3.0e-24 115.9 129 43.4
Nitab4.5_0000172g1330 Nicotiana tabacum HOM05D003666 ORTHO05D016272 5.7e-23 111.7 75 78.7
Gohir.A11G199666 Gossypium hirsutum HOM05D003666 ORTHO05D004770 7.4e-23 111.3 62 93.5
Pp3c2_30660 Physcomitrium patens HOM05D003666 ORTHO05D004770 4.8e-22 108.6 71 83.1
GSVIVG01029664001 Vitis vinifera HOM05D003666 ORTHO05D004770 6.9e-21 104.8 54 92.6
Solyc11g030570.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 1.5e-20 103.6 63 84.1
Nitab4.5_0010687g0060 Nicotiana tabacum HOM05D003666 ORTHO05D036870 1.4e-18 97.1 55 89.1
EL10As15g24100 Beta vulgaris HOM05D001200 ORTHO05D002731 2.7e-17 92.8 113 41.6
EL10As15g24137 Beta vulgaris HOM05D001200 ORTHO05D002731 2.7e-17 92.8 113 41.6
HanXRQChr02g0059711 Helianthus annuus HOM05D001200 ORTHO05D002731 7.9e-17 91.3 129 36.4
HanXRQChr05g0152431 Helianthus annuus HOM05D001200 ORTHO05D002731 7.9e-17 91.3 129 36.4
HanXRQChr08g0211971 Helianthus annuus HOM05D001200 ORTHO05D002731 7.9e-17 91.3 129 36.4
HanXRQChr09g0258521 Helianthus annuus HOM05D001200 ORTHO05D002731 7.9e-17 91.3 129 36.4
HanXRQCPg0580351 Helianthus annuus HOM05D001200 ORTHO05D002731 7.9e-17 91.3 129 36.4
PGSC0003DMG401011339 Solanum tuberosum HOM05D001200 ORTHO05D002731 7.9e-17 91.3 141 36.2
SalBow1G7634 Salvia bowleyana HOM05D001200 ORTHO05D002731 1.0e-16 90.9 141 35.5
DCAR_032536 Daucus carota HOM05D001200 ORTHO05D002731 1.8e-16 90.1 134 36.6
CARHR282420 Cardamine hirsuta HOM05D001200 ORTHO05D002731 2.3e-16 89.7 141 35.5
C09p24620 Brassica napus HOM05D001200 ORTHO05D002731 3.0e-16 89.4 113 39.8
BraSC179t45776Z Brassica rapa HOM05D001200 ORTHO05D002731 3.0e-16 89.4 113 39.8
BraSC59t46549Z Brassica rapa HOM05D001200 ORTHO05D002731 3.0e-16 89.4 113 39.8
Ciclev10010880m.g Citrus clementina HOM05D001200 ORTHO05D002731 3.0e-16 89.4 113 38.9
HanXRQChr00c0690g0576761 Helianthus annuus HOM05D001200 ORTHO05D002731 3.0e-16 89.4 113 39.8
BolSC29t60504H Brassica oleracea HOM05D001200 ORTHO05D002731 3.9e-16 89.0 113 39.8
BolSC37t60791H Brassica oleracea HOM05D001200 ORTHO05D002731 3.9e-16 89.0 113 39.8
BolSC46t60960H Brassica oleracea HOM05D001200 ORTHO05D002731 3.9e-16 89.0 113 39.8
Lj2P1238T97 Lonicera japonica HOM05D001200 ORTHO05D002731 3.9e-16 89.0 129 36.4
Peaxi162Scf00030g02118 Petunia axillaris HOM05D001200 ORTHO05D002731 3.9e-16 89.0 141 35.5
Sed0012006 Sechium edule HOM05D001200 ORTHO05D002731 3.9e-16 89.0 141 36.2
BcaC03g16699 Brassica carinata HOM05D001200 ORTHO05D002731 6.7e-16 88.2 141 34.8
Medtr0002s0170 Medicago truncatula HOM05D001200 ORTHO05D002731 8.8e-16 87.8 113 38.1
Peaxi162Scf01164g00035 Petunia axillaris HOM05D001200 ORTHO05D002731 1.1e-15 87.4 141 34.8
Lalb_Chr23g0274791 Lupinus albus HOM05D001200 ORTHO05D002731 1.5e-15 87.0 113 39.8
RcHm_v2.0_Chr5g0017231 Rosa chinensis HOM05D001200 ORTHO05D002731 1.5e-15 87.0 129 35.7
Gohir.1Z049731 Gossypium hirsutum HOM05D001200 ORTHO05D002731 2.0e-15 86.7 113 38.9
Medtr4g006120 Medicago truncatula HOM05D001200 ORTHO05D002731 2.0e-15 86.7 113 39.8
Medtr4g050950 Medicago truncatula HOM05D001200 ORTHO05D002731 2.0e-15 86.7 113 39.8
RcHm_v2.0_Chr5g0043051 Rosa chinensis HOM05D001200 ORTHO05D002731 2.0e-15 86.7 129 35.7
C09p40370 Brassica napus HOM05D001200 ORTHO05D002731 2.6e-15 86.3 113 38.9
SEGI_13011 Sequoiadendron giganteum HOM05D001200 ORTHO05D002731 2.6e-15 86.3 132 32.6
BolSC29t60544H Brassica oleracea HOM05D001200 ORTHO05D002731 7.4e-15 84.7 114 39.5
Medtr7g021720 Medicago truncatula HOM05D001200 ORTHO05D002731 7.4e-15 84.7 113 38.9
Nn064s42212 Nelumbo nucifera HOM05D001200 ORTHO05D002731 2.8e-14 82.8 129 34.1
Pp3c6_27070 Physcomitrium patens HOM05D003666 ORTHO05D004770 4.1e-13 79.0 62 71.0
Medtr7g075220 Medicago truncatula HOM05D000504 ORTHO05D002731 3.4e-12 75.9 113 35.4
Hma1.2p1_0402F.1_g145120 Hydrangea macrophylla HOM05D003666 ORTHO05D004770 4.5e-12 75.5 51 82.4
Lalb_Chr07g0191761 Lupinus albus HOM05D001200 ORTHO05D002731 4.5e-12 75.5 101 39.6
Haze_27149 Corylus avellana HOM05D003666 ORTHO05D004770 1.7e-11 73.6 144 34.7
BolSC47t61066H Brassica oleracea HOM05D001200 ORTHO05D002731 8.5e-11 71.2 94 37.2
Oeu053979.1 Olea europaea HOM05D001200 ORTHO05D002731 1.4e-10 70.5 86 38.4
BolC2t08908H Brassica oleracea HOM05D001200 ORTHO05D002731 3.2e-10 69.3 94 38.3
Solyc10g061990.3 Solanum lycopersicum HOM05D003666 ORTHO05D004770 7.2e-10 68.2 39 79.5
HanXRQChr11g0323741 Helianthus annuus HOM05D001200 ORTHO05D002731 9.4e-10 67.8 89 37.1
CsaV3_UNG210140 Cucumis sativus L. HOM05D001200 ORTHO05D002731 1.6e-09 67.0 117 33.3
BolSC44t60820H Brassica oleracea HOM05D001200 ORTHO05D002731 3.6e-09 65.9 92 38.0
Nitab4.5_0001346g0060 Nicotiana tabacum HOM05D003666 ORTHO05D004770 1.0e-08 64.3 34 88.2
Hund08793 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund12716 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund12843 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund23968 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund27631 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund27678 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund27755 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund27831 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund28330 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund28438 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund28448 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund28536 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund28587 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund28596 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund28613 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund28850 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund28880 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund28937 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund28946 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund28951 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund28954 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund28961 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund28974 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund28979 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund29026 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund29089 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund29109 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund29179 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund29186 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund29244 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund29247 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund29251 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund29254 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund29261 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund29273 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund29277 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund29281 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund29285 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund29288 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund29316 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund29434 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund29438 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund29453 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund29499 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund29654 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund29713 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund29755 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund29814 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund29818 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund30036 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund30039 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund30120 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund30177 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund30365 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Hund30388 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.8e-08 63.5 89 36.0
Nitab4.5_0000172g0150 Nicotiana tabacum HOM05D016892 ORTHO05D016272 3.0e-08 62.8 41 80.5
SMO086G0020 Selaginella moellendorffii HOM05D001200 ORTHO05D002731 8.8e-08 61.2 101 34.7
BraSC59t46528Z Brassica rapa HOM05D001200 ORTHO05D002731 2.0e-07 60.1 117 32.5
BolC2t10611H Brassica oleracea HOM05D001200 ORTHO05D002731 9.7e-07 57.8 76 39.5
HanXRQChr17g0557761 Helianthus annuus HOM05D001200 ORTHO05D002731 9.7e-07 57.8 93 30.1
Pp3c23_19840 Physcomitrium patens HOM05D003666 ORTHO05D004770 1.7e-06 57.0 37 70.3
Gorai.006G071400 Gossypium raimondii HOM05D001200 ORTHO05D002731 2.2e-06 56.6 86 33.7
Lalb_Chr13g0292801 Lupinus albus HOM05D001200 ORTHO05D002731 2.8e-06 56.2 91 31.9
CSS0015485 Camellia sinensis var. sinensis HOM05D003666 ORTHO05D004770 8.2e-06 54.7 112 40.2


User provided reference genes

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