Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g09918 Nelumbo nucifera HOM05D003517 ORTHO05D009798 2.2e-60 235.3 113 100.0
Nn1g10026 Nelumbo nucifera HOM05D003517 ORTHO05D009798 2.9e-44 181.8 88 98.9
Nn1g10028 Nelumbo nucifera HOM05D003517 ORTHO05D009798 2.9e-44 181.8 88 98.9
Hma1.2p1_0020F.1_g014220 Hydrangea macrophylla HOM05D003517 ORTHO05D009798 8.0e-42 173.7 88 93.2
Ca_14831_v3 Cicer arietinum L. HOM05D003517 ORTHO05D009798 3.0e-41 171.8 91 90.1
Lj5g0015285 Lotus japonicus HOM05D003517 ORTHO05D009798 6.8e-41 170.6 88 93.2
LjContig00439g0008559 Lotus japonicus HOM05D003517 ORTHO05D009798 6.8e-41 170.6 88 93.2
Medtr0082s0030 Medicago truncatula HOM05D003517 ORTHO05D009798 6.8e-41 170.6 88 93.2
TPR.G20538 Trifolium pratense HOM05D003517 ORTHO05D009798 6.8e-41 170.6 88 93.2
DCAR_032455 Daucus carota HOM05D003517 ORTHO05D009798 1.5e-40 169.5 88 90.9
Lj2P1236T76 Lonicera japonica HOM05D003517 ORTHO05D009798 1.5e-40 169.5 91 91.2
RcHm_v2.0_MTg0499001 Rosa chinensis HOM05D003517 ORTHO05D009798 2.0e-40 169.1 88 92.0
Lalb_Chr00c24g0406771 Lupinus albus HOM05D003517 ORTHO05D009798 3.4e-40 168.3 88 92.0
VMungo0985G0017 Vigna mungo HOM05D003517 ORTHO05D009798 7.5e-40 167.2 88 89.8
GSVIVG01006669001 Vitis vinifera HOM05D003517 ORTHO05D009798 1.3e-39 166.4 94 87.2
HanXRQChr10g0310901 Helianthus annuus HOM05D003517 ORTHO05D009798 6.3e-39 164.1 113 74.3
CAN.G110.13 Capsicum annuum HOM05D003517 ORTHO05D009798 4.1e-38 161.4 86 88.4
CAN.G85.23 Capsicum annuum HOM05D003517 ORTHO05D009798 4.1e-38 161.4 86 88.4
Solyc00g021640.2 Solanum lycopersicum HOM05D003517 ORTHO05D009798 4.1e-38 161.4 86 88.4
PGSC0003DMG400033608 Solanum tuberosum HOM05D003517 ORTHO05D009798 4.1e-38 161.4 86 88.4
Peaxi162Scf00456g00032 Petunia axillaris HOM05D003517 ORTHO05D009794 5.4e-38 161.0 85 89.4
arahy.Tifrunner.gnm1.ann1.PT41Y0 Arachis hypogaea HOM05D003517 ORTHO05D009798 7.0e-38 160.6 88 88.6
CsaV3_UNG208660 Cucumis sativus L. HOM05D003517 ORTHO05D009798 1.6e-37 159.5 88 85.2
Nitab4.5_0010559g0050 Nicotiana tabacum HOM05D003517 ORTHO05D009798 3.5e-37 158.3 86 87.2
CAN.G1109.3 Capsicum annuum HOM05D003517 ORTHO05D009798 1.0e-36 156.8 85 87.1
Lalb_Chr22g0353801 Lupinus albus HOM05D003517 ORTHO05D009798 1.0e-36 156.8 88 86.4
SGA_v2.0_scaffold420G51390 Striga asiatica HOM05D003517 ORTHO05D009798 1.7e-36 156.0 88 84.1
Zm00001eb384400 Zea mays HOM05D003517 ORTHO05D009798 6.5e-36 154.1 89 84.3
Zm00001eb436030 Zea mays HOM05D003517 ORTHO05D009798 6.5e-36 154.1 89 84.3
Zm00001eb438100 Zea mays HOM05D003517 ORTHO05D009798 6.5e-36 154.1 89 84.3
Zm00001eb438980 Zea mays HOM05D003517 ORTHO05D009798 6.5e-36 154.1 89 84.3
Zm00001eb439060 Zea mays HOM05D003517 ORTHO05D009798 6.5e-36 154.1 89 84.3
A04p09560 Brassica napus HOM05D003517 ORTHO05D009798 1.6e-34 149.4 88 80.7
BolSC28t60322H Brassica oleracea HOM05D003517 ORTHO05D009798 1.6e-34 149.4 88 80.7
BolSC28t60424H Brassica oleracea HOM05D003517 ORTHO05D009798 1.6e-34 149.4 88 80.7
BraSC48t46288Z Brassica rapa HOM05D003517 ORTHO05D009798 1.6e-34 149.4 88 80.7
BraSC48t46302Z Brassica rapa HOM05D003517 ORTHO05D009798 1.6e-34 149.4 88 80.7
Thhalv10023100m.g Eutrema salsugineum HOM05D003517 ORTHO05D009798 1.6e-34 149.4 88 80.7
AT2G07734 Arabidopsis thaliana HOM05D003517 ORTHO05D009798 4.7e-34 147.9 88 79.5
ATMG00290 Arabidopsis thaliana HOM05D003517 ORTHO05D009798 4.7e-34 147.9 88 79.5
SabraMtG0002700 Salix brachista HOM05D000890 ORTHO05D000697 4.7e-34 147.9 84 86.9
Nitab4.5_0001152g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 3.0e-33 145.2 86 79.1
Eucgr.H02717 Eucalyptus grandis HOM05D003517 ORTHO05D009798 1.3e-31 139.8 106 71.7
Nitab4.5_0003784g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 3.7e-31 138.3 86 77.9
EL10Ac7g18051 Beta vulgaris HOM05D003517 ORTHO05D009798 1.6e-29 132.9 87 74.7
Nitab4.5_0000172g1110 Nicotiana tabacum HOM05D003517 ORTHO05D009798 5.9e-29 131.0 83 74.7
HanXRQChr16g0504301 Helianthus annuus HOM05D003517 ORTHO05D009798 1.7e-28 129.4 88 73.9
HanXRQMTg0579381 Helianthus annuus HOM05D003517 ORTHO05D009798 1.7e-28 129.4 88 73.9
Lsat_1_v5_gn_7_67721 Lactuca sativa HOM05D003517 ORTHO05D009798 1.7e-28 129.4 88 73.9
TPR.G31549 Trifolium pratense HOM05D003517 ORTHO05D009798 3.6e-26 121.7 67 85.1
Nitab4.5_0000172g2160 Nicotiana tabacum HOM05D003517 ORTHO05D009798 5.7e-24 114.4 86 66.3
Solyc11g030940.3 Solanum lycopersicum HOM05D003517 ORTHO05D009798 1.7e-23 112.8 74 73.0
Nitab4.5_0001127g0280 Nicotiana tabacum HOM05D003517 ORTHO05D009794 1.8e-22 109.4 58 86.2
Hma1.2p1_0020F.1_g014210 Hydrangea macrophylla HOM05D003517 ORTHO05D009798 9.2e-22 107.1 57 84.2
SGA_v2.0_scaffold648G53338 Striga asiatica HOM05D003517 ORTHO05D009798 2.7e-21 105.5 76 67.1
Nitab4.5_0003945g0070 Nicotiana tabacum HOM05D003517 ORTHO05D009798 3.5e-21 105.1 64 79.7
HanXRQChr10g0302361 Helianthus annuus HOM05D003517 ORTHO05D009798 8.6e-20 100.5 88 59.1
MBI05_g23322_MAGBIO Magnolia biondii HOM05D003517 ORTHO05D009798 8.6e-20 100.5 54 94.4
PSO585G0042 Papaver somniferum HOM05D003517 ORTHO05D009798 4.3e-19 98.2 112 51.8
PSO063G7170 Papaver somniferum HOM05D003517 ORTHO05D009798 1.6e-18 96.3 112 50.0
SEGI_36410 Sequoiadendron giganteum HOM05D003517 ORTHO05D009798 3.6e-18 95.1 89 52.8
Eucgr.C02512 Eucalyptus grandis HOM05D003517 ORTHO05D009798 1.4e-17 93.2 54 87.0
BraSC48t46337Z Brassica rapa HOM05D003517 ORTHO05D009798 1.3e-15 86.7 56 76.8
Nitab4.5_0000351g0300 Nicotiana tabacum HOM05D003517 ORTHO05D009798 3.5e-13 78.6 42 85.7
Aqoxy4G01626 Aquilegia oxysepala HOM05D003517 ORTHO05D005131 5.6e-11 71.2 43 79.1
Lj2g0009144 Lotus japonicus HOM05D000751 ORTHO05D000889 6.2e-10 67.8 37 86.5
Gorai.001G161800 Gossypium raimondii HOM05D003517 ORTHO05D009798 1.4e-09 66.6 36 86.1
Sp3g25550 Schrenkiella parvula HOM05D003517 ORTHO05D009798 4.0e-09 65.1 36 80.6
CARHR287140 Cardamine hirsuta HOM05D003517 ORTHO05D009798 6.8e-09 64.3 42 71.4
CSS0018598 Camellia sinensis var. sinensis HOM05D002859 ORTHO05D003120 1.3e-07 60.1 38 73.7


User provided reference genes

Program Settings