Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g09806 Nelumbo nucifera HOM05D000004 ORTHO05D000002 2.1e-61 238.8 115 100.0
Nn1g04221 Nelumbo nucifera HOM05D000004 ORTHO05D000002 9.9e-48 193.4 111 84.7
Nn5g27115 Nelumbo nucifera HOM05D000004 ORTHO05D000002 9.0e-41 170.2 114 76.3
Nn7g37314 Nelumbo nucifera HOM05D000004 ORTHO05D000002 1.8e-33 146.0 108 68.5
Nn1g03780 Nelumbo nucifera HOM05D000004 ORTHO05D000002 1.9e-30 136.0 92 68.5
Nn2g14342 Nelumbo nucifera HOM05D000004 ORTHO05D000002 7.9e-29 130.6 115 54.8
Nn2g15711 Nelumbo nucifera HOM05D000004 ORTHO05D000002 1.9e-27 125.9 115 53.9
Nn2g14750 Nelumbo nucifera HOM05D000004 ORTHO05D000002 3.3e-27 125.2 74 78.4
TPR.G22228 Trifolium pratense HOM05D000004 ORTHO05D000002 5.7e-19 97.8 117 41.9
TPR.G18991 Trifolium pratense HOM05D000004 ORTHO05D000002 9.7e-19 97.1 116 42.2
AUR62034871 Chenopodium quinoa HOM05D000004 ORTHO05D000002 4.8e-18 94.7 97 50.5
TPR.G28616 Trifolium pratense HOM05D000004 ORTHO05D000002 2.4e-17 92.4 95 44.2
EL10Ac7g17357 Beta vulgaris HOM05D000004 ORTHO05D000002 2.0e-16 89.4 98 43.9
AUR62040888 Chenopodium quinoa HOM05D000004 ORTHO05D000002 2.2e-15 85.9 98 46.9
Nn8g40371 Nelumbo nucifera HOM05D000004 ORTHO05D011610 3.8e-15 85.1 89 47.2
EL10Ac9g22701 Beta vulgaris HOM05D000004 ORTHO05D000002 1.1e-14 83.6 99 40.4
AUR62004749 Chenopodium quinoa HOM05D000004 ORTHO05D000002 3.6e-13 78.6 80 45.0
AUR62037280 Chenopodium quinoa HOM05D000432 ORTHO05D000320 3.6e-13 78.6 88 42.0
Sopen11g025280 Solanum pennellii HOM05D000004 ORTHO05D000002 1.0e-12 77.0 109 37.6
Sopen02g018880 Solanum pennellii HOM05D000004 ORTHO05D000048 2.3e-12 75.9 109 36.7
Sopen03g015220 Solanum pennellii HOM05D000004 ORTHO05D000002 2.3e-12 75.9 109 36.7
Sp3g29695 Schrenkiella parvula HOM05D000004 ORTHO05D000002 3.0e-12 75.5 111 35.1
Lalb_Chr21g0316241 Lupinus albus HOM05D000004 ORTHO05D000002 5.1e-12 74.7 102 35.3
BcaC04g19062 Brassica carinata HOM05D061053 ORTHO05D000002 6.7e-12 74.3 109 35.8
Psat5g117680 Pisum sativum HOM05D000004 ORTHO05D000002 1.1e-11 73.6 115 33.9
Sopen07g005380 Solanum pennellii HOM05D000004 ORTHO05D000048 2.0e-11 72.8 88 38.6
BolC9t56893H Brassica oleracea HOM05D011596 ORTHO05D000002 2.5e-11 72.4 102 37.3
ECA240G2001 Erigeron canadensis HOM05D000059 ORTHO05D004122 3.3e-11 72.0 87 40.2
BolC1t04627H Brassica oleracea HOM05D011596 ORTHO05D000002 7.4e-11 70.9 107 34.6
Sopen04g023950 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-10 69.3 88 37.5
Atru.chr6.164 Acer truncatum HOM05D000544 ORTHO05D000002 3.7e-10 68.6 83 41.0
Lalb_Chr23g0273591 Lupinus albus HOM05D000004 ORTHO05D000002 3.7e-10 68.6 90 35.6
AL2G10580 Arabidopsis lyrata HOM05D011085 ORTHO05D013451 4.8e-10 68.2 81 38.3
CAN.G960.71 Capsicum annuum HOM05D000004 ORTHO05D000002 8.2e-10 67.4 115 33.9
COL.COLO4_33175 Corchorus olitorius HOM05D000004 ORTHO05D000002 1.1e-09 67.0 95 37.9
ECA248G2380 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.1e-09 67.0 87 40.2
Sopen10g022440 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-09 67.0 89 38.2
Sopen08g016280 Solanum pennellii HOM05D000004 ORTHO05D000002 1.4e-09 66.6 89 34.8
ECA233G5891 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.8e-09 66.2 87 39.1
Sopen10g028550 Solanum pennellii HOM05D000004 ORTHO05D000002 2.4e-09 65.9 75 45.3
CAN.G370.23 Capsicum annuum HOM05D000004 ORTHO05D000002 3.1e-09 65.5 127 30.7
COL.COLO4_37053 Corchorus olitorius HOM05D000004 ORTHO05D000002 3.1e-09 65.5 95 35.8
Psat2g014880 Pisum sativum HOM05D000004 ORTHO05D000002 4.1e-09 65.1 90 36.7
CAN.G1687.1 Capsicum annuum HOM05D000004 ORTHO05D000002 5.3e-09 64.7 88 37.5
CAN.G386.37 Capsicum annuum HOM05D000004 ORTHO05D000002 5.3e-09 64.7 85 38.8
ECA233G5842 Erigeron canadensis HOM05D000068 ORTHO05D000084 5.3e-09 64.7 87 37.9
Aa31LG4G9850 Aethionema arabicum HOM05D000004 ORTHO05D000002 6.9e-09 64.3 108 32.4
ECA236G4933 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.9e-09 64.3 87 36.8
Psat1g003800 Pisum sativum HOM05D000004 ORTHO05D000002 6.9e-09 64.3 90 35.6
QL01p053992 Quercus lobata HOM05D000004 ORTHO05D000002 6.9e-09 64.3 91 41.8
QL04p085052 Quercus lobata HOM05D000004 ORTHO05D000002 6.9e-09 64.3 91 41.8
QL08p043961 Quercus lobata HOM05D000004 ORTHO05D000002 6.9e-09 64.3 91 41.8
Sopen01g010380 Solanum pennellii HOM05D000004 ORTHO05D000002 6.9e-09 64.3 88 35.2
TWI09G0741 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 6.9e-09 64.3 91 37.4
ECA248G2403 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.1e-09 63.9 87 35.6
Psat5g069760 Pisum sativum HOM05D000004 ORTHO05D000002 9.1e-09 63.9 118 33.1
QL10p043279 Quercus lobata HOM05D000004 ORTHO05D000002 9.1e-09 63.9 116 36.2
Psat5g116760 Pisum sativum HOM05D000004 ORTHO05D000002 1.2e-08 63.5 90 36.7
SpUn0980_0010 Schrenkiella parvula HOM05D011596 ORTHO05D000002 1.5e-08 63.2 92 34.8
AUR62042635 Chenopodium quinoa HOM05D018884 ORTHO05D000002 2.0e-08 62.8 73 42.5
COL.COLO4_20540 Corchorus olitorius HOM05D000004 ORTHO05D000002 2.0e-08 62.8 92 34.8
Sopen01g012930 Solanum pennellii HOM05D019044 ORTHO05D018848 2.0e-08 62.8 77 40.3
AL3G28900 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 2.6e-08 62.4 109 33.0
COL.COLO4_10893 Corchorus olitorius HOM05D000004 ORTHO05D000002 2.6e-08 62.4 92 33.7
ECA234G0112 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.6e-08 62.4 87 36.8
QL02p059512 Quercus lobata HOM05D000004 ORTHO05D000002 2.6e-08 62.4 116 37.1
AL4G24660 Arabidopsis lyrata HOM05D000689 ORTHO05D013451 3.4e-08 62.0 109 33.0
COL.COLO4_08406 Corchorus olitorius HOM05D000004 ORTHO05D000002 3.4e-08 62.0 99 33.3
ECA247G0045 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.4e-08 62.0 89 36.0
QL10p040115 Quercus lobata HOM05D000004 ORTHO05D000002 3.4e-08 62.0 116 36.2
COL.COLO4_19448 Corchorus olitorius HOM05D000004 ORTHO05D000002 4.5e-08 61.6 90 35.6
ECA247G0635 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.9e-08 61.2 89 38.2
CAN.G1954.3 Capsicum annuum HOM05D000004 ORTHO05D000002 7.7e-08 60.8 88 31.8
CAN.G532.42 Capsicum annuum HOM05D000004 ORTHO05D000002 7.7e-08 60.8 115 33.0
COL.COLO4_15060 Corchorus olitorius HOM05D000004 ORTHO05D000002 7.7e-08 60.8 91 36.3
COL.COLO4_22247 Corchorus olitorius HOM05D000004 ORTHO05D000002 7.7e-08 60.8 99 33.3
ECA233G3083 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.7e-08 60.8 89 36.0
ECA233G4222 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.7e-08 60.8 89 34.8
Psat3g135520 Pisum sativum HOM05D000004 ORTHO05D000002 7.7e-08 60.8 90 34.4
Sopen07g004430 Solanum pennellii HOM05D000002 ORTHO05D000001 7.7e-08 60.8 89 36.0
COL.COLO4_12314 Corchorus olitorius HOM05D001619 ORTHO05D001541 1.0e-07 60.5 73 37.0
Atru.chr7.1185 Acer truncatum HOM05D000004 ORTHO05D000002 2.2e-07 59.3 112 33.9
CSS0031064 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.2e-07 59.3 110 36.4
ECA234G1032 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.2e-07 59.3 89 37.1
Nn2g12379 Nelumbo nucifera HOM05D000004 ORTHO05D000002 2.9e-07 58.9 108 30.6
COL.COLO4_32014 Corchorus olitorius HOM05D000004 ORTHO05D000002 3.8e-07 58.5 90 33.3
ECA233G3795 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.8e-07 58.5 89 34.8
ECA246G1059 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.8e-07 58.5 113 31.9
ECA246G5244 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.8e-07 58.5 119 33.6
PSO675G0046 Papaver somniferum HOM05D000004 ORTHO05D000002 3.8e-07 58.5 91 36.3
COL.COLO4_24818 Corchorus olitorius HOM05D000004 ORTHO05D000002 5.0e-07 58.2 92 33.7
ECA248G2061 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.0e-07 58.2 89 33.7
CAN.G370.89 Capsicum annuum HOM05D000004 ORTHO05D000002 6.5e-07 57.8 88 33.0
COL.COLO4_23642 Corchorus olitorius HOM05D000004 ORTHO05D000002 1.1e-06 57.0 92 31.5
ECA246G1959 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.1e-06 57.0 105 31.4
Psat5g099160 Pisum sativum HOM05D000004 ORTHO05D000002 1.1e-06 57.0 91 35.2
Psat7g017240 Pisum sativum HOM05D000004 ORTHO05D000002 1.1e-06 57.0 91 35.2
CAN.G504.92 Capsicum annuum HOM05D000004 ORTHO05D000857 1.4e-06 56.6 113 30.1
COL.COLO4_33791 Corchorus olitorius HOM05D000004 ORTHO05D000002 1.4e-06 56.6 113 31.0
ECA238G3964 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.4e-06 56.6 115 28.7
Sabra15G0047100 Salix brachista HOM05D000113 ORTHO05D001108 1.4e-06 56.6 82 36.6
Sopen05g025480 Solanum pennellii HOM05D000004 ORTHO05D000002 1.4e-06 56.6 118 29.7
Sopen10g008640 Solanum pennellii HOM05D000004 ORTHO05D000002 1.4e-06 56.6 89 31.5
Psat6g140840 Pisum sativum HOM05D000004 ORTHO05D000002 1.9e-06 56.2 75 38.7
BolC9t56732H Brassica oleracea HOM05D011596 ORTHO05D000002 2.5e-06 55.8 85 36.5
Sp1g30070 Schrenkiella parvula HOM05D000004 ORTHO05D000002 2.5e-06 55.8 83 33.7
TAR481G0005 Trochodendron aralioides HOM05D000004 ORTHO05D000002 2.5e-06 55.8 92 34.8
EL10Ac7g16673 Beta vulgaris HOM05D000004 ORTHO05D000002 3.2e-06 55.5 58 37.9
ECA246G1596 Erigeron canadensis HOM05D000004 ORTHO05D000048 3.2e-06 55.5 82 35.4
COL.COLO4_16106 Corchorus olitorius HOM05D000004 ORTHO05D000002 4.2e-06 55.1 100 32.0
COL.COLO4_16155 Corchorus olitorius HOM05D000004 ORTHO05D000002 4.2e-06 55.1 110 30.9
ECA236G5029 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.2e-06 55.1 104 29.8
ECA238G2785 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.2e-06 55.1 121 29.8
PSO541G6020 Papaver somniferum HOM05D000004 ORTHO05D000002 4.2e-06 55.1 119 33.6
vmacro19668 Vaccinium macrocarpon HOM05D000792 ORTHO05D004195 4.2e-06 55.1 92 33.7
CAN.G2537.1 Capsicum annuum HOM05D000004 ORTHO05D000002 5.5e-06 54.7 82 30.5
ECA232G1063 Erigeron canadensis HOM05D000006 ORTHO05D000001 5.5e-06 54.7 107 31.8
Psat2g047800 Pisum sativum HOM05D000004 ORTHO05D000002 5.5e-06 54.7 91 34.1
COL.COLO4_19400 Corchorus olitorius HOM05D000004 ORTHO05D000002 7.2e-06 54.3 73 38.4
TWI77G0663 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 7.2e-06 54.3 100 33.0
CSS0019420 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.4e-06 53.9 91 33.0
Psat2g059760 Pisum sativum HOM05D000004 ORTHO05D000002 9.4e-06 53.9 92 34.8
Sopen07g020790 Solanum pennellii HOM05D000004 ORTHO05D000002 9.4e-06 53.9 84 35.7


User provided reference genes

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