Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g08619 Nelumbo nucifera HOM05D004799 ORTHO05D005500 3.4e-84 315.1 171 100.0
TAR628G0692 Trochodendron aralioides HOM05D004799 ORTHO05D005500 1.2e-52 210.3 170 71.2
TAR376G0767 Trochodendron aralioides HOM05D004799 ORTHO05D005500 2.9e-51 205.7 171 70.2
GSVIVG01023017001 Vitis vinifera HOM05D004799 ORTHO05D005500 1.2e-46 190.3 169 65.7
Dinv19352 Davidia involucrata HOM05D004799 ORTHO05D005500 7.6e-44 181.0 168 64.3
Duzib248G0546 Durio zibethinus HOM05D004799 ORTHO05D005500 1.4e-42 176.8 168 61.3
Hma1.2p1_0217F.1_g091930 Hydrangea macrophylla HOM05D004799 ORTHO05D005500 1.9e-42 176.4 162 65.4
Duzib132G0636 Durio zibethinus HOM05D004799 ORTHO05D005500 9.3e-42 174.1 166 61.4
Aqoxy6G00151 Aquilegia oxysepala HOM05D004799 ORTHO05D005500 2.3e-40 169.5 166 63.3
Gohir.D01G167800 Gossypium hirsutum HOM05D004799 ORTHO05D005500 3.9e-40 168.7 166 60.8
Gorai.002G208500 Gossypium raimondii HOM05D004799 ORTHO05D005500 5.1e-40 168.3 166 60.8
Lj5A248T74 Lonicera japonica HOM05D004799 ORTHO05D005500 5.1e-40 168.3 171 62.0
Gohir.A01G177000 Gossypium hirsutum HOM05D004799 ORTHO05D005500 8.7e-40 167.5 166 60.2
Cfa005544 Carpinus fangiana HOM05D004799 ORTHO05D005500 1.1e-39 167.2 168 58.9
Manes.10G132000 Manihot esculenta HOM05D004799 ORTHO05D005500 1.5e-39 166.8 169 59.2
PGSC0003DMG400023776 Solanum tuberosum HOM05D004799 ORTHO05D005500 3.3e-39 165.6 161 62.1
Ciclev10002345m.g Citrus clementina HOM05D004799 ORTHO05D005500 4.3e-39 165.2 172 58.7
Gohir.A03G210900 Gossypium hirsutum HOM05D004799 ORTHO05D005500 7.3e-39 164.5 166 57.8
Sopen01g046960 Solanum pennellii HOM05D004799 ORTHO05D005500 7.3e-39 164.5 161 61.5
FvH4_5g30080 Fragaria vesca HOM05D004799 ORTHO05D005500 9.6e-39 164.1 165 58.8
FAN18G4597 Fragaria x ananassa HOM05D004799 ORTHO05D005500 9.6e-39 164.1 165 58.8
Nn5g28066 Nelumbo nucifera HOM05D004799 ORTHO05D005500 9.6e-39 164.1 122 75.4
FAN13G3307 Fragaria x ananassa HOM05D004799 ORTHO05D005500 1.6e-38 163.3 165 58.8
Haze_01626 Corylus avellana HOM05D004799 ORTHO05D005500 6.2e-38 161.4 168 58.3
FAN04G2475 Fragaria x ananassa HOM05D004799 ORTHO05D005500 6.2e-38 161.4 165 58.8
Sabra03G0013400 Salix brachista HOM05D004799 ORTHO05D005500 8.1e-38 161.0 165 58.8
Cpa.g.sc2.26 Carica papaya HOM05D004799 ORTHO05D005500 1.1e-37 160.6 169 56.8
Actinidia00218 Actinidia chinensis HOM05D004799 ORTHO05D005500 1.4e-37 160.2 169 59.2
Potri.001G209100 Populus trichocarpa HOM05D004799 ORTHO05D005500 1.4e-37 160.2 170 58.8
CiPaw.06G148900 Carya illinoinensis HOM05D004799 ORTHO05D005500 1.8e-37 159.8 169 58.6
MSTRG.27841 Avicennia marina HOM05D004799 ORTHO05D005500 1.5e-36 156.8 160 58.8
MD08G1225100 Malus domestica HOM05D004799 ORTHO05D005500 2.6e-36 156.0 169 59.2
Migut.B00668 Erythranthe guttata HOM05D004799 ORTHO05D005500 7.6e-36 154.5 164 55.5
MSTRG.16532 Avicennia marina HOM05D004799 ORTHO05D005500 9.9e-36 154.1 159 57.2
SGA_v2.0_scaffold110G31288 Striga asiatica HOM05D004799 ORTHO05D005500 3.8e-35 152.1 171 56.1
Peaxi162Scf00011g00139 Petunia axillaris HOM05D004799 ORTHO05D005500 4.9e-35 151.8 170 57.1
Gohir.D02G232500 Gossypium hirsutum HOM05D004799 ORTHO05D005500 6.4e-35 151.4 166 55.4
RcHm_v2.0_Chr7g0224271 Rosa chinensis HOM05D004799 ORTHO05D005500 6.4e-35 151.4 165 57.6
Sabra01G0161300 Salix brachista HOM05D004799 ORTHO05D005500 6.4e-35 151.4 181 54.7
Cc02_g22290 Coffea canephora HOM05D004799 ORTHO05D005500 8.4e-35 151.0 161 57.8
Manes.07G013800 Manihot esculenta HOM05D004799 ORTHO05D005500 1.1e-34 150.6 169 57.4
Lalb_Chr07g0185691 Lupinus albus HOM05D004799 ORTHO05D005500 1.9e-34 149.8 171 55.0
MD15G1418700 Malus domestica HOM05D004799 ORTHO05D005500 1.9e-34 149.8 169 58.6
Gorai.005G260300 Gossypium raimondii HOM05D004799 ORTHO05D005500 3.2e-34 149.1 166 54.8
Potri.003G021500 Populus trichocarpa HOM05D004799 ORTHO05D005500 4.2e-34 148.7 169 56.8
TPR.G2141 Trifolium pratense HOM05D004799 ORTHO05D005500 4.2e-34 148.7 169 54.4
Dinv24262 Davidia involucrata HOM05D004799 ORTHO05D005500 7.1e-34 147.9 161 57.1
Eucgr.I02711 Eucalyptus grandis HOM05D004799 ORTHO05D005500 9.3e-34 147.5 173 53.2
Atru.chr6.1081 Acer truncatum HOM05D004799 ORTHO05D005500 2.1e-33 146.4 142 59.9
Medtr2g007770 Medicago truncatula HOM05D004799 ORTHO05D005500 2.1e-33 146.4 170 54.7
Lj6g0003329 Lotus japonicus HOM05D004799 ORTHO05D005500 2.7e-33 146.0 163 52.8
Oeu008877.2 Olea europaea HOM05D004799 ORTHO05D005500 2.7e-33 146.0 195 52.8
QL02p098623 Quercus lobata HOM05D004799 ORTHO05D005500 2.7e-33 146.0 200 49.5
ATR0684G092 Amborella trichopoda HOM05D004799 ORTHO05D005500 3.5e-33 145.6 166 53.6
Oeu012743.2 Olea europaea HOM05D004799 ORTHO05D005500 4.6e-33 145.2 185 53.0
Prupe.1G562800 Prunus persica HOM05D004799 ORTHO05D005500 1.3e-32 143.7 168 56.0
THA.LOC104809537 Tarenaya hassleriana HOM05D004799 ORTHO05D005500 6.6e-32 141.4 160 55.0
Lalb_Chr12g0204381 Lupinus albus HOM05D004799 ORTHO05D005500 8.7e-32 141.0 172 54.1
vmacro01776 Vaccinium macrocarpon HOM05D004799 ORTHO05D005500 1.5e-31 140.2 195 47.7
arahy.Tifrunner.gnm1.ann1.BG3XJE Arachis hypogaea HOM05D004799 ORTHO05D005500 2.5e-31 139.4 162 52.5
MBI03_g11149_MAGBIO Magnolia biondii HOM05D004799 ORTHO05D005500 2.5e-31 139.4 251 43.4
HanXRQChr03g0066881 Helianthus annuus HOM05D004799 ORTHO05D005500 9.6e-31 137.5 168 54.2
arahy.Tifrunner.gnm1.ann1.ZS42GJ Arachis hypogaea HOM05D004799 ORTHO05D005500 1.3e-30 137.1 162 51.9
Psat1g220000 Pisum sativum HOM05D004799 ORTHO05D005500 6.2e-30 134.8 155 56.1
TWI59G1038 Tripterygium wilfordii HOM05D004799 ORTHO05D005500 6.2e-30 134.8 161 50.9
CsaV3_5G024750 Cucumis sativus L. HOM05D004799 ORTHO05D005500 3.1e-29 132.5 168 51.2
Sc14g0006850 Simmondsia chinensis HOM05D004799 ORTHO05D005500 3.1e-29 132.5 167 49.1
ClCG09G016220 Citrullus lanatus HOM05D004799 ORTHO05D005500 4.0e-29 132.1 168 53.0
CsaV3_7G007080 Cucumis sativus L. HOM05D004799 ORTHO05D005500 4.0e-29 132.1 168 51.2
CiPaw.05G042800 Carya illinoinensis HOM05D004799 ORTHO05D005500 5.3e-29 131.7 210 44.3
Nitab4.5_0010140g0010 Nicotiana tabacum HOM05D004799 ORTHO05D005500 9.0e-29 131.0 159 52.8
Carub.0001s1103 Capsella rubella HOM05D004799 ORTHO05D005500 1.2e-28 130.6 174 52.9
MELO3C018586.2 Cucumis melo HOM05D004799 ORTHO05D005500 2.0e-28 129.8 169 50.9
Atru.chr6.1045 Acer truncatum HOM05D004799 ORTHO05D005500 3.4e-28 129.0 131 58.0
CAN.G1352.25 Capsicum annuum HOM05D004799 ORTHO05D005500 5.8e-28 128.3 160 51.2
CANSAT11G1940 Cannabis sativa HOM05D004799 ORTHO05D005500 7.6e-28 127.9 184 49.5
PSO528G0257 Papaver somniferum HOM05D004799 ORTHO05D005500 7.6e-28 127.9 169 49.7
Thecc.02G041200 Theobroma cacao HOM05D004799 ORTHO05D005500 7.6e-28 127.9 166 49.4
Zm00001eb011470 Zea mays HOM05D004799 ORTHO05D005500 2.2e-27 126.3 170 47.1
Lsat_1_v5_gn_9_116381 Lactuca sativa HOM05D004799 ORTHO05D005500 2.9e-27 125.9 170 51.2
TWI23G0644 Tripterygium wilfordii HOM05D004799 ORTHO05D005500 1.1e-26 124.0 161 47.8
Aa31LG1G3310 Aethionema arabicum HOM05D004799 ORTHO05D005500 3.2e-26 122.5 171 48.0
HPP92_019221 Vanilla planifolia HOM05D004799 ORTHO05D005500 5.4e-26 121.7 158 53.8
Zm00001eb398170 Zea mays HOM05D004799 ORTHO05D005500 7.1e-26 121.3 171 46.8
Glyma.08G128300 Glycine max HOM05D004799 ORTHO05D005500 1.2e-25 120.6 159 49.1
Lj9C308T7 Lonicera japonica HOM05D004799 ORTHO05D005500 1.6e-25 120.2 148 52.0
Sp1g10030 Schrenkiella parvula HOM05D004799 ORTHO05D005500 1.6e-25 120.2 154 50.6
DCAR_005625 Daucus carota HOM05D004799 ORTHO05D005500 2.1e-25 119.8 167 48.5
Os03g0262100 Oryza sativa ssp. japonica HOM05D004799 ORTHO05D005500 3.5e-25 119.0 169 46.2
BraA08t35264Z Brassica rapa HOM05D004799 ORTHO05D005500 7.9e-25 117.9 163 48.5
MBI03_g11127_MAGBIO Magnolia biondii HOM05D004799 ORTHO05D005500 1.0e-24 117.5 124 61.3
VMungo0251G3647 Vigna mungo HOM05D004799 ORTHO05D005500 1.3e-24 117.1 169 48.5
FAN08G0327 Fragaria x ananassa HOM05D004799 ORTHO05D005500 2.3e-24 116.3 165 46.7
Hund19012 Selenicereus undatus HOM05D004799 ORTHO05D005500 2.3e-24 116.3 171 47.4
Ah.04g149450 Amaranthus hybridus HOM05D004799 ORTHO05D005500 3.0e-24 115.9 172 47.1
A08p33480 Brassica napus HOM05D004799 ORTHO05D005500 3.0e-24 115.9 164 48.8
COL.COLO4_17895 Corchorus olitorius HOM05D004799 ORTHO05D005500 3.0e-24 115.9 128 55.5
Rhsim11G0131600 Rhododendron simsii HOM05D004799 ORTHO05D005500 3.9e-24 115.5 258 38.4
AUR62018552 Chenopodium quinoa HOM05D004799 ORTHO05D005500 5.1e-24 115.2 159 47.2
unitig_26.g9556 Utricularia gibba HOM05D004799 ORTHO05D005500 5.1e-24 115.2 160 48.8
Ca_00089_v3 Cicer arietinum L. HOM05D004799 ORTHO05D005500 6.7e-24 114.8 209 42.1
Ca_29928_v3 Cicer arietinum L. HOM05D004799 ORTHO05D005500 6.7e-24 114.8 209 42.1
AUR62020867 Chenopodium quinoa HOM05D004799 ORTHO05D005500 8.7e-24 114.4 159 46.5
Sed0004816 Sechium edule HOM05D004799 ORTHO05D005500 8.7e-24 114.4 169 47.9
Lsat_1_v5_gn_7_77960 Lactuca sativa HOM05D004799 ORTHO05D005500 1.1e-23 114.0 165 49.1
ECA240G2283 Erigeron canadensis HOM05D004799 ORTHO05D005500 1.5e-23 113.6 169 47.9
CDE02G4357 Ceratophyllum demersum HOM05D004799 ORTHO05D005500 1.9e-23 113.2 172 48.3
EL10Ac3g07450 Beta vulgaris HOM05D004799 ORTHO05D005500 4.3e-23 112.1 173 48.0
CARHR011640 Cardamine hirsuta HOM05D004799 ORTHO05D005500 1.3e-22 110.5 169 48.5
Actinidia39055 Actinidia chinensis HOM05D004799 ORTHO05D005500 4.8e-22 108.6 124 54.8
BcaB03g13259 Brassica carinata HOM05D004799 ORTHO05D005500 6.2e-22 108.2 157 49.0
C08p14470 Brassica napus HOM05D004799 ORTHO05D005500 6.2e-22 108.2 164 47.0
Nitab4.5_0005539g0010 Nicotiana tabacum HOM05D004799 ORTHO05D005500 8.1e-22 107.8 159 47.2
PSO170G0171 Papaver somniferum HOM05D004799 ORTHO05D005500 5.3e-21 105.1 169 45.0
AL1G22490 Arabidopsis lyrata HOM05D004799 ORTHO05D005500 6.9e-21 104.8 165 44.8
BcaC07g38663 Brassica carinata HOM05D004799 ORTHO05D005500 6.9e-21 104.8 164 45.7
BolC8t49096H Brassica oleracea HOM05D004799 ORTHO05D005500 6.9e-21 104.8 164 45.7
Phvul.002G251000 Phaseolus vulgaris HOM05D004799 ORTHO05D005500 1.5e-20 103.6 166 45.8
GSVIVG01013911001 Vitis vinifera HOM05D004799 ORTHO05D005500 1.5e-20 103.6 92 63.0
AT1G11400 Arabidopsis thaliana HOM05D004799 ORTHO05D005500 4.5e-20 102.1 165 44.8
Glyma.05G170200 Glycine max HOM05D004799 ORTHO05D005500 4.9e-19 98.6 173 42.2
CSS0024882 Camellia sinensis var. sinensis HOM05D004799 ORTHO05D005500 1.1e-18 97.4 113 52.2
CSS0037217 Camellia sinensis var. sinensis HOM05D004799 ORTHO05D005500 1.1e-18 97.4 113 52.2
SalBow6G1776 Salvia bowleyana HOM05D004799 ORTHO05D005500 9.3e-18 94.4 168 42.9
SalBow6G5744 Salvia bowleyana HOM05D004799 ORTHO05D005500 9.3e-18 94.4 168 42.9
A06p08020 Brassica napus HOM05D004799 ORTHO05D005500 3.3e-15 85.9 156 41.7
BraA06t24001Z Brassica rapa HOM05D004799 ORTHO05D005500 3.3e-15 85.9 156 41.7
Thhalv10008698m.g Eutrema salsugineum HOM05D004799 ORTHO05D005500 1.6e-14 83.6 166 38.6
BcaC05g25015 Brassica carinata HOM05D004799 ORTHO05D005500 1.4e-13 80.5 156 41.7
C05p09620 Brassica napus HOM05D004799 ORTHO05D005500 1.4e-13 80.5 156 41.7
BolC5t29704H Brassica oleracea HOM05D004799 ORTHO05D005500 1.4e-13 80.5 156 41.7
BcaB03g13258 Brassica carinata HOM05D004799 ORTHO05D005500 5.8e-12 75.1 84 52.4
Pp3c4_27250 Physcomitrium patens HOM05D004799 ORTHO05D005500 5.8e-12 75.1 165 38.2
CSS0012117 Camellia sinensis var. sinensis HOM05D004799 ORTHO05D005500 4.2e-10 68.9 45 75.6
SEGI_00858 Sequoiadendron giganteum HOM05D004799 ORTHO05D005500 7.1e-10 68.2 107 43.0
CSS0018254 Camellia sinensis var. sinensis HOM05D004799 ORTHO05D005500 9.3e-10 67.8 45 75.6
Glyma.14G170300 Glycine max HOM05D004799 ORTHO05D005500 2.7e-09 66.2 122 41.8
HPP92_009361 Vanilla planifolia HOM05D004799 ORTHO05D005500 4.6e-09 65.5 150 36.7
SEGI_10500 Sequoiadendron giganteum HOM05D004799 ORTHO05D005500 1.0e-08 64.3 39 87.2
CBR_g22015 Chara braunii HOM05D004799 ORTHO05D005500 3.3e-07 59.3 190 32.1
arahy.Tifrunner.gnm1.ann1.DUW5WJ Arachis hypogaea HOM05D004799 ORTHO05D005500 4.3e-07 58.9 49 63.3
Ah.13g066130 Amaranthus hybridus HOM05D004799 ORTHO05D005500 5.7e-07 58.5 65 50.8
Mapoly0065s0027 Marchantia polymorpha HOM05D004799 ORTHO05D005500 7.4e-07 58.2 168 34.5
Ah.13g077920 Amaranthus hybridus HOM05D004799 ORTHO05D005500 4.8e-06 55.5 104 37.5


User provided reference genes

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