Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g08571 Nelumbo nucifera HOM05D003578 ORTHO05D004021 1.4e-188 662.9 369 100.0
CiPaw.06G150300 Carya illinoinensis HOM05D003578 ORTHO05D004021 3.8e-117 425.6 368 61.4
Cfa005568 Carpinus fangiana HOM05D003578 ORTHO05D004021 4.2e-116 422.2 363 61.2
GSVIVG01023023001 Vitis vinifera HOM05D003578 ORTHO05D004021 4.2e-116 422.2 334 67.4
Nn1g08568 Nelumbo nucifera HOM05D003578 ORTHO05D004021 6.7e-114 414.8 246 96.7
Actinidia39059 Actinidia chinensis HOM05D003578 ORTHO05D004021 2.6e-113 412.9 366 61.2
Prupe.1G564000 Prunus persica HOM05D003578 ORTHO05D004021 5.7e-113 411.8 364 59.9
CSS0005813 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 8.2e-112 407.9 366 61.2
Duzib132G0407 Durio zibethinus HOM05D003578 ORTHO05D004021 2.6e-110 402.9 368 58.4
CSS0023378 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 3.5e-110 402.5 366 60.9
PSO017G3053 Papaver somniferum HOM05D003578 ORTHO05D004021 3.5e-110 402.5 365 61.6
MBI06_g22317_MAGBIO Magnolia biondii HOM05D003578 ORTHO05D004021 5.9e-110 401.7 370 58.9
PSO478G2549 Papaver somniferum HOM05D003578 ORTHO05D004021 1.3e-109 400.6 365 60.8
MD15G1419200 Malus domestica HOM05D003578 ORTHO05D004021 3.2e-108 396.0 367 56.9
Haze_10786 Corylus avellana HOM05D003578 ORTHO05D004021 4.2e-108 395.6 399 54.4
TAR374G1024 Trochodendron aralioides HOM05D003578 ORTHO05D004021 1.0e-106 391.0 270 74.1
GSVIVG01013912001 Vitis vinifera HOM05D003578 ORTHO05D004021 5.2e-106 388.7 364 61.3
Gohir.A03G210700 Gossypium hirsutum HOM05D003578 ORTHO05D004021 4.4e-105 385.6 363 56.2
TWI23G0776 Tripterygium wilfordii HOM05D003578 ORTHO05D004021 5.7e-105 385.2 356 60.7
Rhsim11G0132000 Rhododendron simsii HOM05D003578 ORTHO05D004021 1.7e-104 383.6 384 55.2
Sc20g0004020 Simmondsia chinensis HOM05D003578 ORTHO05D004021 1.7e-104 383.6 368 55.2
Gohir.D01G167300 Gossypium hirsutum HOM05D003578 ORTHO05D004021 2.8e-104 382.9 362 56.6
Gorai.002G207800 Gossypium raimondii HOM05D003578 ORTHO05D004021 1.8e-103 380.2 362 56.4
PSO266G0076 Papaver somniferum HOM05D003578 ORTHO05D004021 2.4e-103 379.8 363 59.8
Dinv19347 Davidia involucrata HOM05D003578 ORTHO05D004021 3.1e-103 379.4 363 56.7
Glyma.15G048000 Glycine max HOM05D003578 ORTHO05D004021 5.3e-103 378.6 358 57.0
Cc02_g22230 Coffea canephora HOM05D003578 ORTHO05D004021 7.0e-103 378.3 354 56.5
Lj6g0021493 Lotus japonicus HOM05D003578 ORTHO05D004021 3.5e-102 375.9 365 54.5
Ca_00092_v3 Cicer arietinum L. HOM05D003578 ORTHO05D004021 1.0e-101 374.4 363 55.4
Ca_29931_v3 Cicer arietinum L. HOM05D003578 ORTHO05D004021 1.0e-101 374.4 363 55.4
Gohir.A01G176500 Gossypium hirsutum HOM05D003578 ORTHO05D004021 1.3e-101 374.0 362 55.8
Eucgr.G00633 Eucalyptus grandis HOM05D003578 ORTHO05D004021 2.2e-101 373.2 359 56.5
Potri.001G208700 Populus trichocarpa HOM05D003578 ORTHO05D004021 5.0e-101 372.1 362 59.1
Atru.chr6.1000 Acer truncatum HOM05D003578 ORTHO05D004021 8.5e-101 371.3 363 57.0
PSO478G5278 Papaver somniferum HOM05D003578 ORTHO05D004021 2.5e-100 369.8 363 57.9
Lj1g0024840 Lotus japonicus HOM05D003578 ORTHO05D004021 1.2e-99 367.5 365 53.2
MSTRG.16537 Avicennia marina HOM05D003578 ORTHO05D004021 2.7e-99 366.3 356 57.9
Ciclev10007743m.g Citrus clementina HOM05D003578 ORTHO05D004021 2.3e-98 363.2 367 54.2
TPR.G17513 Trifolium pratense HOM05D003578 ORTHO05D004021 5.2e-98 362.1 353 54.1
Oeu000197.1 Olea europaea HOM05D003578 ORTHO05D004021 8.8e-98 361.3 362 54.1
TWI14G0091 Tripterygium wilfordii HOM05D003578 ORTHO05D004021 8.8e-98 361.3 362 57.2
ClCG05G009820 Citrullus lanatus HOM05D003578 ORTHO05D004021 4.4e-97 359.0 371 53.4
Medtr2g028550 Medicago truncatula HOM05D003578 ORTHO05D004021 4.4e-97 359.0 363 52.1
SGA_v2.0_scaffold1G00330 Striga asiatica HOM05D003578 ORTHO05D004021 1.3e-96 357.5 356 54.8
QL11p018835 Quercus lobata HOM05D003578 ORTHO05D004021 2.2e-96 356.7 359 55.2
Aqoxy7G03367 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 2.8e-96 356.3 366 53.8
Sed0026866 Sechium edule HOM05D003578 ORTHO05D004021 3.7e-96 355.9 367 52.0
Nitab4.5_0003071g0040 Nicotiana tabacum HOM05D003578 ORTHO05D004021 7.0e-95 351.7 359 57.1
CsaV3_3G018800 Cucumis sativus L. HOM05D003578 ORTHO05D004021 1.6e-94 350.5 359 53.5
MELO3C006920.2 Cucumis melo HOM05D003578 ORTHO05D004021 8.5e-93 344.7 362 51.9
Phvul.006G211900 Phaseolus vulgaris HOM05D003578 ORTHO05D004021 2.5e-92 343.2 362 51.4
THA.LOC104824162 Tarenaya hassleriana HOM05D003578 ORTHO05D004021 2.1e-91 340.1 361 51.0
ECA238G3381 Erigeron canadensis HOM05D003578 ORTHO05D004021 2.7e-91 339.7 359 52.4
Thecc.02G041600 Theobroma cacao HOM05D003578 ORTHO05D004021 3.6e-91 339.3 363 51.0
Aa31LG8G7140 Aethionema arabicum HOM05D003578 ORTHO05D004021 4.7e-91 339.0 365 51.5
VMungo0540G1591 Vigna mungo HOM05D003578 ORTHO05D004021 4.7e-91 339.0 354 53.1
Hund15694 Selenicereus undatus HOM05D003578 ORTHO05D004021 6.1e-91 338.6 359 52.1
SGA_v2.0_scaffold110G31277 Striga asiatica HOM05D003578 ORTHO05D004021 1.4e-90 337.4 367 52.9
Nitab4.5_0009907g0020 Nicotiana tabacum HOM05D003578 ORTHO05D004021 1.2e-89 334.3 359 54.6
Sabra01G0161000 Salix brachista HOM05D003578 ORTHO05D004021 1.5e-89 334.0 433 46.9
Gorai.005G260100 Gossypium raimondii HOM05D003578 ORTHO05D004021 7.5e-89 331.6 363 50.7
Cpa.g.sc2.28 Carica papaya HOM05D003578 ORTHO05D004021 9.8e-89 331.3 364 53.3
arahy.Tifrunner.gnm1.ann1.FVSM65 Arachis hypogaea HOM05D003578 ORTHO05D004021 1.7e-88 330.5 359 50.4
AUR62038607 Chenopodium quinoa HOM05D003578 ORTHO05D004021 1.7e-88 330.5 364 51.6
FAN13G2947 Fragaria x ananassa HOM05D003578 ORTHO05D004021 1.7e-88 330.5 367 49.0
PGR042G1741 Punica granatum HOM05D003578 ORTHO05D004021 1.7e-88 330.5 359 51.3
arahy.Tifrunner.gnm1.ann1.H2X3VG Arachis hypogaea HOM05D003578 ORTHO05D004021 3.7e-88 329.3 359 49.9
AUR62033619 Chenopodium quinoa HOM05D003578 ORTHO05D004021 3.7e-88 329.3 361 51.2
CiPaw.05G040700 Carya illinoinensis HOM05D003578 ORTHO05D004021 4.8e-88 328.9 265 63.0
CANSAT11G1197 Cannabis sativa HOM05D003578 ORTHO05D004021 6.3e-88 328.6 368 50.3
FvH4_5g35831 Fragaria vesca HOM05D003578 ORTHO05D004021 1.1e-87 327.8 367 48.8
FAN18G4487 Fragaria x ananassa HOM05D003578 ORTHO05D004021 1.1e-87 327.8 367 48.8
DCAR_029239 Daucus carota HOM05D003578 ORTHO05D004021 1.4e-87 327.4 359 54.0
Gohir.D02G232300 Gossypium hirsutum HOM05D003578 ORTHO05D004021 2.4e-87 326.6 362 50.6
arahy.Tifrunner.gnm1.ann1.0E6AR9 Arachis hypogaea HOM05D003578 ORTHO05D004021 3.1e-87 326.2 359 49.6
Carub.0005s2123 Capsella rubella HOM05D003578 ORTHO05D004021 3.1e-87 326.2 364 48.6
Lsat_1_v5_gn_9_116440 Lactuca sativa HOM05D003578 ORTHO05D004021 4.1e-87 325.9 359 52.4
vmacro01788 Vaccinium macrocarpon HOM05D003578 ORTHO05D004021 4.1e-87 325.9 287 61.3
Aa31LG2G6060 Aethionema arabicum HOM05D003578 ORTHO05D004021 5.4e-87 325.5 365 48.8
FAN08G2591 Fragaria x ananassa HOM05D003578 ORTHO05D004021 7.0e-87 325.1 367 48.2
Lalb_Chr20g0123381 Lupinus albus HOM05D003578 ORTHO05D004021 2.9e-85 319.7 272 60.3
Peaxi162Scf00011g01125 Petunia axillaris HOM05D003578 ORTHO05D004021 6.6e-85 318.5 359 53.2
FAN04G0507 Fragaria x ananassa HOM05D003578 ORTHO05D004021 8.6e-85 318.2 367 48.8
CARHR164540 Cardamine hirsuta HOM05D003578 ORTHO05D004021 1.9e-84 317.0 365 47.7
SHI16565 Sapria himalayana HOM05D003578 ORTHO05D004021 1.9e-84 317.0 361 49.3
Aqoxy2G04052 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 3.3e-84 316.2 366 50.8
RcHm_v2.0_Chr5g0046031 Rosa chinensis HOM05D003578 ORTHO05D004021 7.2e-84 315.1 367 49.6
CAN.G1352.14 Capsicum annuum HOM05D003578 ORTHO05D004021 6.1e-83 312.0 359 51.3
Migut.B00662 Erythranthe guttata HOM05D003578 ORTHO05D004021 6.1e-83 312.0 365 50.4
Lsat_1_v5_gn_9_118160 Lactuca sativa HOM05D003578 ORTHO05D004021 4.0e-82 309.3 357 48.7
AL5G35710 Arabidopsis lyrata HOM05D003578 ORTHO05D004021 1.2e-81 307.8 364 46.7
arahy.Tifrunner.gnm1.ann1.CJK4SJ Arachis hypogaea HOM05D003578 ORTHO05D004021 3.7e-80 302.8 370 46.5
HanXRQChr03g0066191 Helianthus annuus HOM05D003578 ORTHO05D004021 8.3e-80 301.6 358 50.0
CDE10G0634 Ceratophyllum demersum HOM05D003578 ORTHO05D004021 1.1e-79 301.2 354 47.5
Sopen01g047080 Solanum pennellii HOM05D003578 ORTHO05D004021 4.1e-79 299.3 263 59.3
PGSC0003DMG400029761 Solanum tuberosum HOM05D003578 ORTHO05D004021 1.2e-78 297.7 263 58.9
Solyc01g104570.4 Solanum lycopersicum HOM05D003578 ORTHO05D004021 1.6e-78 297.4 263 58.9
COL.COLO4_33122 Corchorus olitorius HOM05D003578 ORTHO05D004021 7.8e-78 295.0 362 48.3
CSS0048877 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 6.6e-77 292.0 376 50.0
EL10Ac2g02673 Beta vulgaris HOM05D003578 ORTHO05D004021 2.8e-75 286.6 359 48.7
BolC6t37412H Brassica oleracea HOM05D003578 ORTHO05D004021 2.8e-75 286.6 364 45.1
BcaC08g44691 Brassica carinata HOM05D003578 ORTHO05D004021 1.0e-74 284.6 357 44.3
C06p22270 Brassica napus HOM05D003578 ORTHO05D004021 1.0e-74 284.6 357 44.3
unitig_8.g4524 Utricularia gibba HOM05D003578 ORTHO05D004021 1.8e-74 283.9 351 48.1
AT3G54630 Arabidopsis thaliana HOM05D003578 ORTHO05D004021 3.1e-74 283.1 364 43.7
Thhalv10010243m.g Eutrema salsugineum HOM05D003578 ORTHO05D004021 6.8e-74 282.0 365 44.7
arahy.Tifrunner.gnm1.ann1.V2489D Arachis hypogaea HOM05D003578 ORTHO05D004021 9.8e-73 278.1 376 43.4
HanXRQChr03g0066541 Helianthus annuus HOM05D003578 ORTHO05D004021 2.9e-72 276.6 364 45.9
BcaB02g07728 Brassica carinata HOM05D003578 ORTHO05D004021 8.3e-72 275.0 364 41.5
BolC8t50589H Brassica oleracea HOM05D003578 ORTHO05D004021 8.3e-72 275.0 364 43.7
Aqoxy2G02351 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 1.9e-71 273.9 330 50.6
C08p29780 Brassica napus HOM05D003578 ORTHO05D004021 7.0e-71 271.9 364 43.4
BcaB01g00173 Brassica carinata HOM05D003578 ORTHO05D004021 1.2e-70 271.2 364 42.6
CsaV3_3G021940 Cucumis sativus L. HOM05D003578 ORTHO05D004021 3.0e-69 266.5 248 56.5
BcaC07g39801 Brassica carinata HOM05D003578 ORTHO05D004021 6.6e-69 265.4 364 42.3
A09p47580 Brassica napus HOM05D003578 ORTHO05D004021 5.6e-68 262.3 364 42.3
BraA09t40214Z Brassica rapa HOM05D003578 ORTHO05D004021 5.6e-68 262.3 364 42.3
Ah.10g033260 Amaranthus hybridus HOM05D003578 ORTHO05D004021 7.3e-68 261.9 366 44.8
Oeu026056.1 Olea europaea HOM05D003578 ORTHO05D004021 8.9e-66 255.0 224 60.3
MD08G1226900 Malus domestica HOM05D003578 ORTHO05D004021 3.4e-65 253.1 246 54.9
Sp5g07820 Schrenkiella parvula HOM05D003578 ORTHO05D004021 4.4e-65 252.7 365 41.9
Eucgr.G00629 Eucalyptus grandis HOM05D003578 ORTHO05D004021 8.3e-64 248.4 246 55.7
Os08g0468400 Oryza sativa ssp. japonica HOM05D003578 ORTHO05D004021 1.1e-63 248.1 313 43.1
Psat1g170680 Pisum sativum HOM05D003578 ORTHO05D004021 1.0e-61 241.5 262 50.4
Manes.07G012900 Manihot esculenta HOM05D003578 ORTHO05D004021 8.6e-61 238.4 247 58.3
Nn1g08562 Nelumbo nucifera HOM05D003578 ORTHO05D004021 7.3e-60 235.3 124 98.4
Psat1g170240 Pisum sativum HOM05D003578 ORTHO05D004021 1.3e-56 224.6 260 48.8
arahy.Tifrunner.gnm1.ann1.MNPV6T Arachis hypogaea HOM05D003578 ORTHO05D004021 3.6e-51 206.5 237 47.3
HPP92_025538 Vanilla planifolia HOM05D003578 ORTHO05D004021 8.1e-51 205.3 249 44.2
Nn7g38101 Nelumbo nucifera HOM05D003578 ORTHO05D004021 5.8e-49 199.1 164 68.9
HPP92_025499 Vanilla planifolia HOM05D003578 ORTHO05D004021 4.3e-44 183.0 360 34.2
GSVIVG01023034001 Vitis vinifera HOM05D003578 ORTHO05D004021 2.1e-43 180.6 153 62.7
GSVIVG01023046001 Vitis vinifera HOM05D003578 ORTHO05D004021 4.8e-43 179.5 153 62.7
Lj1C1063G12 Lonicera japonica HOM05D003578 ORTHO05D004021 1.4e-42 177.9 164 57.3
SEGI_09452 Sequoiadendron giganteum HOM05D003578 ORTHO05D004021 2.9e-40 170.2 250 39.2
Lj1A1063T36 Lonicera japonica HOM05D003578 ORTHO05D004021 1.6e-38 164.5 156 54.5
A07p22210 Brassica napus HOM05D003578 ORTHO05D004021 6.2e-35 152.5 161 46.0
ATR0193G049 Amborella trichopoda HOM05D003578 ORTHO05D004021 4.0e-34 149.8 198 43.4
arahy.Tifrunner.gnm1.ann1.0Y2WZB Arachis hypogaea HOM05D003578 ORTHO05D004021 2.9e-32 143.7 146 51.4
CAN.G1352.18 Capsicum annuum HOM05D003578 ORTHO05D004021 5.1e-29 132.9 162 48.1
ATR0686G046 Amborella trichopoda HOM05D003578 ORTHO05D004021 6.2e-27 125.9 143 46.9
HPP92_026283 Vanilla planifolia HOM05D003578 ORTHO05D004021 5.8e-25 119.4 175 42.9
Zm00001eb040130 Zea mays HOM05D003578 ORTHO05D004021 3.8e-24 116.7 181 38.1
GSVIVG01023076001 Vitis vinifera HOM05D003578 ORTHO05D004021 1.9e-23 114.4 107 53.3
ATR0193G025 Amborella trichopoda HOM05D003578 ORTHO05D004021 7.9e-22 109.0 118 45.8
CsaV3_6G032180 Cucumis sativus L. HOM05D003578 ORTHO05D004021 1.5e-20 104.8 103 54.4
SEGI_11795 Sequoiadendron giganteum HOM05D003578 ORTHO05D004021 4.3e-20 103.2 166 37.3
Zm00001eb317570 Zea mays HOM05D003578 ORTHO05D004021 4.3e-20 103.2 141 41.1
PGSC0003DMG400023774 Solanum tuberosum HOM05D003578 ORTHO05D004021 7.4e-20 102.4 123 47.2
SMO254G0006 Selaginella moellendorffii HOM05D003578 ORTHO05D004021 9.6e-20 102.1 353 25.5
ATR0686G029 Amborella trichopoda HOM05D003578 ORTHO05D004021 2.8e-19 100.5 120 42.5
AagrBONN_evm.TU.Sc2ySwM_228.1577 Anthoceros agrestis HOM05D003578 ORTHO05D004021 2.4e-18 97.4 342 23.4
Zm00001eb226250 Zea mays HOM05D003578 ORTHO05D004021 4.1e-18 96.7 123 43.1
COL.COLO4_34280 Corchorus olitorius HOM05D003578 ORTHO05D004021 6.9e-18 95.9 95 55.8
Actinidia00223 Actinidia chinensis HOM05D003578 ORTHO05D004021 1.2e-17 95.1 211 32.2
Lsat_1_v5_gn_4_97940 Lactuca sativa HOM05D003523 ORTHO05D004021 4.5e-17 93.2 67 65.7
Lsat_1_v5_gn_3_132221 Lactuca sativa HOM05D003523 ORTHO05D004493 1.7e-16 91.3 73 63.0
GSVIVG01038756001 Vitis vinifera HOM05D003578 ORTHO05D004021 8.4e-16 89.0 84 53.6
Solyc01g104520.3 Solanum lycopersicum HOM05D003578 ORTHO05D004021 1.4e-15 88.2 129 43.4
GSVIVG01023027001 Vitis vinifera HOM05D003578 ORTHO05D004021 2.1e-14 84.3 70 61.4
Cre02.g098300 Chlamydomonas reinhardtii HOM05D003578 ORTHO05D004021 7.9e-14 82.4 359 24.5
PRCOL_00003819 Prasinoderma coloniale HOM05D003578 ORTHO05D004021 1.1e-12 78.6 355 23.1
Aqoxy2G04053 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 1.3e-11 75.1 65 58.5
Aqoxy7G03366 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 1.3e-11 75.1 65 58.5
Zm00001eb322170 Zea mays HOM05D003578 ORTHO05D004021 1.6e-11 74.7 77 45.5
Atru.chr6.1018 Acer truncatum HOM05D003578 ORTHO05D004021 6.3e-11 72.8 74 48.6
FAN11G2867 Fragaria x ananassa HOM05D001988 ORTHO05D006298 5.3e-10 69.7 60 56.7
GSVIVG01023070001 Vitis vinifera HOM05D003578 ORTHO05D004021 1.5e-09 68.2 54 59.3
SEGI_20846 Sequoiadendron giganteum HOM05D003578 ORTHO05D004021 2.5e-07 60.8 82 40.2
Actinidia17466 Actinidia chinensis HOM05D003578 ORTHO05D004021 6.1e-06 56.2 146 32.2
Lsat_1_v5_gn_4_72880 Lactuca sativa HOM05D003578 ORTHO05D004021 6.1e-06 56.2 88 43.2


User provided reference genes

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