Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g08377 Nelumbo nucifera HOM05D006383 ORTHO05D007815 0.0e+00 1097.8 536 100.0
TAR317G0001 Trochodendron aralioides HOM05D006383 ORTHO05D007815 9.3e-282 973.0 546 87.9
Atru.chr4.4 Acer truncatum HOM05D006383 ORTHO05D007815 1.5e-268 929.1 537 83.6
Glyma.01G231700 Glycine max HOM05D006383 ORTHO05D007815 2.7e-265 918.3 537 82.9
LjContig00222g0014398 Lotus japonicus HOM05D006383 ORTHO05D007815 1.5e-263 912.5 538 83.1
Glyma.11G014600 Glycine max HOM05D006383 ORTHO05D007815 3.3e-263 911.4 537 82.7
GSVIVG01027490001 Vitis vinifera HOM05D006383 ORTHO05D007815 4.3e-263 911.0 537 84.4
Medtr5g008710 Medicago truncatula HOM05D006383 ORTHO05D007815 1.4e-261 906.0 535 82.6
Phvul.002G035400 Phaseolus vulgaris HOM05D006383 ORTHO05D007815 3.1e-261 904.8 538 81.4
Actinidia07537 Actinidia chinensis HOM05D006383 ORTHO05D007815 2.6e-260 901.7 537 82.5
Potri.013G161700 Populus trichocarpa HOM05D006383 ORTHO05D007815 5.9e-260 900.6 537 82.7
Manes.15G189200 Manihot esculenta HOM05D006383 ORTHO05D007815 1.4e-258 896.0 535 82.2
Psat2g186800 Pisum sativum HOM05D006383 ORTHO05D007815 9.4e-258 893.3 536 80.4
Lj8A304T42 Lonicera japonica HOM05D006383 ORTHO05D007815 1.2e-257 892.9 561 78.8
TPR.G38040 Trifolium pratense HOM05D006383 ORTHO05D007815 1.0e-256 889.8 536 80.0
Haze_11088 Corylus avellana HOM05D006383 ORTHO05D007815 3.9e-256 887.9 544 81.1
TWI79G0526 Tripterygium wilfordii HOM05D006383 ORTHO05D007815 1.5e-255 885.9 537 80.6
Prupe.2G049900 Prunus persica HOM05D006383 ORTHO05D007815 9.7e-255 883.2 539 81.4
Duzib248G1218 Durio zibethinus HOM05D006383 ORTHO05D007815 2.8e-254 881.7 541 81.1
Cfa008544 Carpinus fangiana HOM05D006383 ORTHO05D007815 4.5e-252 874.4 537 81.2
PSO782G2360 Papaver somniferum HOM05D006383 ORTHO05D007815 4.5e-252 874.4 538 81.6
VMungo1215G1626 Vigna mungo HOM05D006383 ORTHO05D007815 4.2e-250 867.8 540 79.8
QL10p065235 Quercus lobata HOM05D006383 ORTHO05D007815 5.5e-250 867.5 620 72.1
ECA234G1746 Erigeron canadensis HOM05D006383 ORTHO05D007815 7.9e-249 863.6 537 78.6
HanXRQChr10g0309251 Helianthus annuus HOM05D006383 ORTHO05D007815 2.3e-248 862.1 537 78.8
Lsat_1_v5_gn_5_82200 Lactuca sativa HOM05D006383 ORTHO05D007815 3.0e-248 861.7 537 78.2
Migut.L01608 Erythranthe guttata HOM05D006383 ORTHO05D007815 4.4e-247 857.8 537 77.5
DCAR_020439 Daucus carota HOM05D006383 ORTHO05D007815 1.3e-246 856.3 543 77.3
Aqoxy1G01561 Aquilegia oxysepala HOM05D006383 ORTHO05D007815 2.2e-246 855.5 535 78.5
CDE09G0807 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 2.4e-245 852.0 537 76.5
CiPaw.02G126400 Carya illinoinensis HOM05D006383 ORTHO05D007815 7.0e-245 850.5 538 79.0
CSS0026217 Camellia sinensis var. sinensis HOM05D006383 ORTHO05D007815 1.7e-243 845.9 537 78.2
CAN.G40.1 Capsicum annuum HOM05D006383 ORTHO05D007815 2.9e-243 845.1 541 76.7
Sc26g0001410 Simmondsia chinensis HOM05D006383 ORTHO05D007815 3.8e-243 844.7 539 78.7
PSO063G0245 Papaver somniferum HOM05D006383 ORTHO05D007815 8.0e-241 837.0 538 78.3
Hma1.2p1_0122F.1_g057520 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 3.0e-240 835.1 539 77.0
Lalb_Chr05g0211431 Lupinus albus HOM05D006383 ORTHO05D007815 4.0e-240 834.7 488 82.2
Solyc01g056340.4 Solanum lycopersicum HOM05D006383 ORTHO05D007815 5.7e-239 830.9 515 78.4
THA.LOC104813077 Tarenaya hassleriana HOM05D006383 ORTHO05D007815 5.0e-235 817.8 545 74.3
Gorai.012G136900 Gossypium raimondii HOM05D006383 ORTHO05D007815 1.1e-234 816.6 539 76.4
ClCG05G002590 Citrullus lanatus HOM05D006383 ORTHO05D007815 2.5e-234 815.5 538 75.3
Gohir.D04G150300 Gossypium hirsutum HOM05D006383 ORTHO05D007815 3.2e-234 815.1 539 76.4
RcHm_v2.0_Chr1g0329651 Rosa chinensis HOM05D006383 ORTHO05D007815 3.2e-234 815.1 537 75.2
MELO3C006225.2 Cucumis melo HOM05D006383 ORTHO05D007815 1.2e-233 813.1 542 74.5
Eucgr.E01781 Eucalyptus grandis HOM05D006383 ORTHO05D007815 1.0e-232 810.1 538 75.3
Hund03213 Selenicereus undatus HOM05D006383 ORTHO05D007815 1.0e-232 810.1 537 75.4
CANSAT01G2053 Cannabis sativa HOM05D006383 ORTHO05D007815 3.0e-232 808.5 540 75.0
Gohir.A04G110100 Gossypium hirsutum HOM05D006383 ORTHO05D007815 1.2e-231 806.6 539 75.7
Peaxi162Scf00005g01511 Petunia axillaris HOM05D006383 ORTHO05D007815 1.7e-230 802.7 574 71.8
Sp6g07220 Schrenkiella parvula HOM05D006383 ORTHO05D007815 2.8e-230 802.0 540 73.9
Sabra13G0129300 Salix brachista HOM05D006383 ORTHO05D007815 1.4e-229 799.7 619 67.5
Sed0006461 Sechium edule HOM05D006383 ORTHO05D007815 5.4e-229 797.7 538 74.0
AL6G44030 Arabidopsis lyrata HOM05D006383 ORTHO05D007815 9.1e-229 797.0 544 72.8
Thhalv10028566m.g Eutrema salsugineum HOM05D006383 ORTHO05D007815 1.2e-228 796.6 540 73.1
MD02G1269900 Malus domestica HOM05D006383 ORTHO05D007815 2.0e-228 795.8 540 74.6
BcaB01g02763 Brassica carinata HOM05D006383 ORTHO05D007815 2.9e-227 792.0 538 73.4
FAN10G0291 Fragaria x ananassa HOM05D006383 ORTHO05D007815 6.5e-227 790.8 539 74.8
C03p34900 Brassica napus HOM05D006383 ORTHO05D007815 8.5e-227 790.4 540 73.0
BolC3t15801H Brassica oleracea HOM05D006383 ORTHO05D007815 1.5e-226 789.6 540 73.0
BcaC01g04690 Brassica carinata HOM05D006383 ORTHO05D007815 3.2e-226 788.5 540 72.8
AT4G10180 Arabidopsis thaliana HOM05D006383 ORTHO05D007815 2.1e-225 785.8 545 72.3
FAN03G2677 Fragaria x ananassa HOM05D006383 ORTHO05D007815 1.4e-224 783.1 544 73.2
SGA_v2.0_scaffold222G42760 Striga asiatica HOM05D006383 ORTHO05D007815 9.8e-223 776.9 555 68.5
A03p28870 Brassica napus HOM05D006383 ORTHO05D007815 1.3e-222 776.5 540 71.9
CARHR256640 Cardamine hirsuta HOM05D006383 ORTHO05D007815 2.2e-222 775.8 546 71.2
BraA03t12085Z Brassica rapa HOM05D006383 ORTHO05D007815 2.4e-221 772.3 539 71.4
Oeu021235.1 Olea europaea HOM05D006383 ORTHO05D007815 2.9e-219 765.4 539 72.2
Carub.0006s2874 Capsella rubella HOM05D006383 ORTHO05D007815 1.1e-218 763.5 543 70.5
Os01g0104600 Oryza sativa ssp. japonica HOM05D006383 ORTHO05D007815 7.3e-218 760.8 535 69.5
SalBow3G0737 Salvia bowleyana HOM05D006383 ORTHO05D007815 1.2e-217 760.0 581 65.7
SalBow5G2916 Salvia bowleyana HOM05D006383 ORTHO05D007815 1.2e-217 760.0 581 65.7
Aa31LG9G11770 Aethionema arabicum HOM05D006383 ORTHO05D007815 4.1e-213 745.0 543 68.9
ATR0620G042 Amborella trichopoda HOM05D006383 ORTHO05D007815 5.4e-213 744.6 490 74.9
Sopen01g020390 Solanum pennellii HOM05D006383 ORTHO05D007815 1.6e-212 743.0 464 78.0
PGR042G0734 Punica granatum HOM05D006383 ORTHO05D007815 4.6e-212 741.5 537 70.8
Zm00001eb317230 Zea mays HOM05D006383 ORTHO05D007815 7.8e-212 740.7 535 69.0
Ciclev10015119m.g Citrus clementina HOM05D006383 ORTHO05D007815 2.3e-211 739.2 474 78.9
Zm00001eb341540 Zea mays HOM05D006383 ORTHO05D007815 5.0e-211 738.0 535 68.4
unitig_8.g3541 Utricularia gibba HOM05D006383 ORTHO05D007815 9.5e-202 707.2 491 68.8
Thecc.02G151200 Theobroma cacao HOM05D006383 ORTHO05D007815 3.6e-201 705.3 441 80.7
EL10Ac3g06365 Beta vulgaris HOM05D006383 ORTHO05D007815 1.9e-197 693.0 650 56.3
FAN06G4711 Fragaria x ananassa HOM05D006383 ORTHO05D007815 2.1e-196 689.5 539 67.2
Nitab4.5_0007118g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 2.1e-196 689.5 607 60.8
FAN01G1101 Fragaria x ananassa HOM05D006383 ORTHO05D007815 6.0e-196 688.0 600 62.3
CsaV3_3G010030 Cucumis sativus L. HOM05D006383 ORTHO05D007815 3.0e-195 685.6 539 66.4
CiPaw.01G204500 Carya illinoinensis HOM05D006383 ORTHO05D007815 1.3e-187 660.2 412 79.6
FvH4_7g04420 Fragaria vesca HOM05D006383 ORTHO05D007815 1.3e-187 660.2 460 72.6
Ah.07g203930 Amaranthus hybridus HOM05D000443 ORTHO05D001278 3.6e-177 625.5 537 60.7
Ca_24479_v3 Cicer arietinum L. HOM05D006383 ORTHO05D007815 3.8e-174 615.5 438 71.2
AUR62030094 Chenopodium quinoa HOM05D006383 ORTHO05D007815 3.0e-171 605.9 537 58.3
SMO351G0573 Selaginella moellendorffii HOM05D006383 ORTHO05D007815 9.0e-168 594.3 545 54.7
HPP92_027515 Vanilla planifolia HOM05D006383 ORTHO05D007815 4.9e-166 588.6 490 61.8
Dinv26644 Davidia involucrata HOM05D006383 ORTHO05D007815 1.4e-157 560.5 367 75.5
Hma1.2p1_0122F.1_g057530 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 6.7e-147 525.0 348 75.9
SHI24488 Sapria himalayana HOM05D006383 ORTHO05D007815 5.9e-143 511.9 509 54.8
Rhsim01G0101600 Rhododendron simsii HOM05D006383 ORTHO05D007815 2.8e-137 493.0 309 77.0
Nitab4.5_0021341g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 2.9e-134 483.0 301 77.1
Pp3c21_10400 Physcomitrium patens HOM05D006383 ORTHO05D007815 1.2e-127 461.1 883 34.9
HPP92_022397 Vanilla planifolia HOM05D006383 ORTHO05D007815 4.5e-127 459.1 373 64.1
Mapoly0064s0101 Marchantia polymorpha HOM05D006383 ORTHO05D007815 2.2e-126 456.8 957 33.5
AagrBONN_evm.TU.Sc2ySwM_228.1213 Anthoceros agrestis HOM05D006383 ORTHO05D007815 2.5e-125 453.4 969 32.7
PGSC0003DMG400031459 Solanum tuberosum HOM05D006383 ORTHO05D007815 2.3e-123 446.8 287 76.3
Pp3c19_5540 Physcomitrium patens HOM05D006383 ORTHO05D007815 3.7e-121 439.5 890 33.0
Pp3c11_18250 Physcomitrium patens HOM05D006383 ORTHO05D007815 7.0e-120 435.3 845 34.8
Cc06_g23460 Coffea canephora HOM05D006383 ORTHO05D007815 2.7e-116 423.3 243 80.2
FAN06G0936 Fragaria x ananassa HOM05D006383 ORTHO05D007815 1.2e-111 407.9 305 67.2
ECA240G0013 Erigeron canadensis HOM05D006383 ORTHO05D007815 1.6e-111 407.5 309 68.0
Nitab4.5_0000075g0020 Nicotiana tabacum HOM05D006383 ORTHO05D007815 1.9e-109 400.6 237 82.7
HPP92_022268 Vanilla planifolia HOM05D006383 ORTHO05D007815 3.2e-96 356.7 265 67.9
vmacro20727 Vaccinium macrocarpon HOM05D006383 ORTHO05D007815 2.3e-83 313.9 196 80.6
Cpa.g.sc21.223 Carica papaya HOM05D006383 ORTHO05D007815 2.4e-72 277.3 170 80.0
AUR62038212 Chenopodium quinoa HOM05D006383 ORTHO05D007815 7.8e-71 272.3 289 54.0
CBR_g19443 Chara braunii HOM05D006383 ORTHO05D007815 1.3e-70 271.6 287 50.9
SEGI_12536 Sequoiadendron giganteum HOM05D006383 ORTHO05D007815 9.7e-37 159.1 129 67.4
PRCOL_00006914 Prasinoderma coloniale HOM05D006383 ORTHO05D007815 4.5e-34 150.2 793 22.6
Sopen01g020410 Solanum pennellii HOM05D006383 ORTHO05D007815 1.8e-30 138.3 111 67.6
Glyma.13G043200 Glycine max HOM05D006383 ORTHO05D007815 5.1e-22 110.2 68 77.9
Zm00001eb129170 Zea mays HOM05D006383 ORTHO05D007815 7.4e-21 106.3 105 52.4
CDE11G0182 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 2.2e-20 104.8 245 31.0
Cre13.g571560 Chlamydomonas reinhardtii HOM05D006383 ORTHO05D007815 2.2e-20 104.8 246 26.8
Zm00001eb417300 Zea mays HOM05D006383 ORTHO05D007815 7.2e-16 89.7 99 51.5
arahy.Tifrunner.gnm1.ann1.W6TY16 Arachis hypogaea HOM05D000199 ORTHO05D007815 9.7e-13 79.3 54 75.9
MCO10G269 Micromonas commoda HOM05D006383 ORTHO05D007815 2.6e-10 71.2 333 22.2
Actinidia02533 Actinidia chinensis HOM05D006383 ORTHO05D007815 1.5e-08 65.5 40 77.5
MBI11_g43687_MAGBIO Magnolia biondii HOM05D006383 ORTHO05D007815 1.9e-08 65.1 34 82.4
SEGI_16502 Sequoiadendron giganteum HOM05D006383 ORTHO05D007815 3.2e-08 64.3 49 65.3


User provided reference genes

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