Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g06048 Nelumbo nucifera HOM05D001027 ORTHO05D000844 1.0e-41 172.9 84 100.0
Nn1g07511 Nelumbo nucifera HOM05D001027 ORTHO05D000844 2.5e-24 115.2 77 76.6
Nn1g04540 Nelumbo nucifera HOM05D001027 ORTHO05D000844 5.4e-19 97.4 73 72.6
TAR376G0109 Trochodendron aralioides HOM05D001027 ORTHO05D000844 3.6e-15 84.7 73 63.0
TAR625G1229 Trochodendron aralioides HOM05D001027 ORTHO05D000844 5.2e-14 80.9 73 63.0
Nn8g41043 Nelumbo nucifera HOM05D001027 ORTHO05D000844 3.4e-13 78.2 73 63.0
Dinv42238 Davidia involucrata HOM05D001027 ORTHO05D000844 1.3e-12 76.3 62 62.9
TAR628G1060 Trochodendron aralioides HOM05D001027 ORTHO05D000844 2.9e-12 75.1 73 60.3
Dinv15813 Davidia involucrata HOM05D001027 ORTHO05D000844 1.9e-11 72.4 62 64.5
CSS0012155 Camellia sinensis var. sinensis HOM05D001027 ORTHO05D000844 5.4e-11 70.9 62 62.9
CiPaw.06G165300 Carya illinoinensis HOM05D001027 ORTHO05D000844 5.4e-11 70.9 73 54.8
Lj9A328T39 Lonicera japonica HOM05D001027 ORTHO05D000844 9.2e-11 70.1 61 65.6
ATR0681G363 Amborella trichopoda HOM05D001027 ORTHO05D000844 1.2e-10 69.7 74 56.8
Phvul.006G123700 Phaseolus vulgaris HOM05D001027 ORTHO05D000844 2.1e-10 68.9 73 53.4
Haze_10266 Corylus avellana HOM05D001027 ORTHO05D000844 2.7e-10 68.6 73 54.8
Hma1.2p1_0661F.1_g198170 Hydrangea macrophylla HOM05D001027 ORTHO05D000844 2.7e-10 68.6 68 54.4
MBI18_g10585_MAGBIO Magnolia biondii HOM05D001027 ORTHO05D000844 2.7e-10 68.6 74 60.8
TWI14G1140 Tripterygium wilfordii HOM05D001027 ORTHO05D000844 3.5e-10 68.2 63 58.7
Prupe.8G146200 Prunus persica HOM05D001027 ORTHO05D000844 6.0e-10 67.4 73 50.7
vmacro01957 Vaccinium macrocarpon HOM05D001027 ORTHO05D000844 6.0e-10 67.4 62 58.1
TWI59G0349 Tripterygium wilfordii HOM05D001027 ORTHO05D000844 1.3e-09 66.2 74 54.1
Rhsim11G0152500 Rhododendron simsii HOM05D001027 ORTHO05D000844 1.7e-09 65.9 62 58.1
VMungo0540G1626 Vigna mungo HOM05D001027 ORTHO05D000844 1.7e-09 65.9 73 50.7
CiPaw.05G018600 Carya illinoinensis HOM05D001027 ORTHO05D000844 3.0e-09 65.1 68 54.4
RhsimUnG0124200 Rhododendron simsii HOM05D001027 ORTHO05D000844 5.1e-09 64.3 62 56.5
Dinv26937 Davidia involucrata HOM05D001027 ORTHO05D000844 6.6e-09 63.9 62 59.7
MD10G1106900 Malus domestica HOM05D001027 ORTHO05D000844 8.7e-09 63.5 73 47.9
THA.LOC104825384 Tarenaya hassleriana HOM05D001027 ORTHO05D000844 1.5e-08 62.8 69 52.2
CSS0022401 Camellia sinensis var. sinensis HOM05D001027 ORTHO05D000844 2.5e-08 62.0 68 55.9
CSS0034494 Camellia sinensis var. sinensis HOM05D001027 ORTHO05D000844 2.5e-08 62.0 68 55.9
PGR102G1507 Punica granatum HOM05D001027 ORTHO05D000844 3.3e-08 61.6 59 57.6
Atru.chr5.2331 Acer truncatum HOM05D001027 ORTHO05D000844 5.6e-08 60.8 61 54.1
Glyma.15G135100 Glycine max HOM05D001027 ORTHO05D000844 5.6e-08 60.8 73 46.6
GSVIVG01037816001 Vitis vinifera HOM05D001027 ORTHO05D000844 5.6e-08 60.8 73 47.9
Actinidia00365 Actinidia chinensis HOM05D001027 ORTHO05D000844 7.3e-08 60.5 60 56.7
Actinidia26783 Actinidia chinensis HOM05D001027 ORTHO05D000844 7.3e-08 60.5 60 56.7
Glyma.09G029300 Glycine max HOM05D001027 ORTHO05D000844 1.2e-07 59.7 73 45.2
Lalb_Chr20g0120231 Lupinus albus HOM05D001027 ORTHO05D000844 1.2e-07 59.7 73 47.9
Duzib248G0855 Durio zibethinus HOM05D001027 ORTHO05D000844 2.1e-07 58.9 68 54.4
Prupe.6G219800 Prunus persica HOM05D001027 ORTHO05D000844 2.1e-07 58.9 45 60.0
CDE08G1661 Ceratophyllum demersum HOM05D001027 ORTHO05D000844 2.8e-07 58.5 64 46.9
Lj7C99T13 Lonicera japonica HOM05D001027 ORTHO05D000844 2.8e-07 58.5 73 49.3
MD15G1298000 Malus domestica HOM05D001027 ORTHO05D000844 4.7e-07 57.8 45 55.6
Lj5A219T45 Lonicera japonica HOM05D001027 ORTHO05D000844 6.2e-07 57.4 60 50.0
Nitab4.5_0011076g0020 Nicotiana tabacum HOM05D001027 ORTHO05D000844 6.2e-07 57.4 73 50.7
Carub.0001s3913 Capsella rubella HOM05D001027 ORTHO05D000844 8.1e-07 57.0 68 45.6
PSO541G0983 Papaver somniferum HOM05D001027 ORTHO05D000844 8.1e-07 57.0 81 49.4
arahy.Tifrunner.gnm1.ann1.1Y2NXV Arachis hypogaea HOM05D001027 ORTHO05D000844 1.1e-06 56.6 73 43.8
Duzib052G0250 Durio zibethinus HOM05D001027 ORTHO05D000844 1.1e-06 56.6 62 51.6
arahy.Tifrunner.gnm1.ann1.4L6GWX Arachis hypogaea HOM05D001027 ORTHO05D000844 1.4e-06 56.2 60 46.7
CAN.G16.13 Capsicum annuum HOM05D001027 ORTHO05D000844 1.4e-06 56.2 73 46.6
PGR142G4246 Punica granatum HOM05D001027 ORTHO05D000844 1.4e-06 56.2 73 45.2
Ca_00922_v3 Cicer arietinum L. HOM05D001027 ORTHO05D000844 1.8e-06 55.8 75 46.7
Ciclev10028926m.g Citrus clementina HOM05D001027 ORTHO05D000844 1.8e-06 55.8 75 50.7
Eucgr.I01053 Eucalyptus grandis HOM05D001027 ORTHO05D000844 1.8e-06 55.8 62 46.8
Lj6g0000325 Lotus japonicus HOM05D001027 ORTHO05D000844 1.8e-06 55.8 73 49.3
Manes.10G082400 Manihot esculenta HOM05D001027 ORTHO05D000844 1.8e-06 55.8 61 49.2
Manes.10G083455 Manihot esculenta HOM05D001027 ORTHO05D000844 1.8e-06 55.8 61 49.2
Aa31LG10G4180 Aethionema arabicum HOM05D001027 ORTHO05D000844 2.4e-06 55.5 68 44.1
PGSC0003DMG400023131 Solanum tuberosum HOM05D001027 ORTHO05D000844 2.4e-06 55.5 62 48.4
Thecc.02G118200 Theobroma cacao HOM05D001027 ORTHO05D000844 2.4e-06 55.5 68 54.4
CiPaw.01G004100 Carya illinoinensis HOM05D001027 ORTHO05D000844 3.1e-06 55.1 52 59.6
Lsat_1_v5_gn_0_28181 Lactuca sativa HOM05D001027 ORTHO05D000844 3.1e-06 55.1 47 57.4
Manes.12G115100 Manihot esculenta HOM05D001027 ORTHO05D000844 3.1e-06 55.1 47 57.4
THA.LOC104815403 Tarenaya hassleriana HOM05D001027 ORTHO05D000844 3.1e-06 55.1 68 41.2
GSVIVG01002384001 Vitis vinifera HOM05D001027 ORTHO05D000844 4.0e-06 54.7 73 52.1
CARHR039980 Cardamine hirsuta HOM05D001027 ORTHO05D000844 5.2e-06 54.3 68 42.6
Lalb_Chr15g0088961 Lupinus albus HOM05D001027 ORTHO05D000844 5.2e-06 54.3 73 43.8
ClCG10G010150 Citrullus lanatus HOM05D001027 ORTHO05D000844 6.9e-06 53.9 73 45.2
Haze_15277 Corylus avellana HOM05D001027 ORTHO05D000844 6.9e-06 53.9 58 55.2
MD10G1107300 Malus domestica HOM05D001027 ORTHO05D000844 6.9e-06 53.9 73 43.8
Sabra14G0004600 Salix brachista HOM05D001027 ORTHO05D000844 6.9e-06 53.9 47 55.3
Sabra14G0004900 Salix brachista HOM05D001027 ORTHO05D000844 6.9e-06 53.9 47 55.3
Lsat_1_v5_gn_5_113860 Lactuca sativa HOM05D001027 ORTHO05D000844 9.0e-06 53.5 58 51.7
Peaxi162Scf00449g00319 Petunia axillaris HOM05D001027 ORTHO05D000844 9.0e-06 53.5 73 43.8
Sc05g0004540 Simmondsia chinensis HOM05D001027 ORTHO05D000844 9.0e-06 53.5 73 46.6


User provided reference genes

Program Settings