Gene: Aa31LG10G4180

General Information

Structural Information

Species Aethionema arabicum
Gene Identifier Aa31LG10G4180
Transcript Identifier Aa31LG10G4180.mRNA1
Gene Type Coding gene
Location LG-10 : 1886590-1888519 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D001027
#Genes/#Species 591/99
Phylogenetic origin

ID ORTHO05D000844
#Genes/#Species 587/99
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

tid Aa31LG10G4180.mRNA1
Alias Aa31LG10G4180
Alias Aa31LG10G4180-mRNA-1

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006334	IEA	InterPro	nucleosome assembly
GO:0006357	ISO	PLAZA Integrative Orthology	regulation of transcription by RNA polymerase II	AT1G49950

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003677	IEA	InterPro	DNA binding
GO:0003691	IEA	InterPro	double-stranded telomeric DNA binding
GO:0042803	ISO	PLAZA Integrative Orthology	protein homodimerization activity	AT1G49950
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT1G49950
GO:1990841	ISO	PLAZA Integrative Orthology	promoter-specific chromatin binding	AT1G49950
GO:0000976	ISO	PLAZA Integrative Orthology	transcription cis-regulatory region binding	AT1G49950
GO:0043047	ISO	PLAZA Integrative Orthology	single-stranded telomeric DNA binding	Zm00001eb357490

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0000786	IEA	InterPro	nucleosome
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT1G49950
GO:0032991	ISO	PLAZA Integrative Orthology	protein-containing complex	AT1G49950
GO:0005730	ISO	PLAZA Integrative Orthology	nucleolus	AT1G49950
GO:0000785	ISO	PLAZA Integrative Orthology	chromatin	AT1G49950

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR005818	Linker histone H1/H5, domain H15
IPR009057	Homeobox-like domain superfamily
IPR001005	SANT/Myb domain
IPR036388	Winged helix-like DNA-binding domain superfamily
IPR044597	Single myb histone 1-6
IPR036390	Winged helix DNA-binding domain superfamily
IPR017930	Myb domain

Mapman id	Description
12.3.3.2.1.2.1	Chromatin organisation.post-translational histone modification.histone lysine methylation.class-I histone methyltransferase activities.PRC2 histone methylation complex.associated protein factors.PRC2-recruiting factor (TRB)