Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g05268 Nelumbo nucifera HOM05D006521 ORTHO05D008087 4.9e-169 597.8 326 100.0
TAR376G0467 Trochodendron aralioides HOM05D006521 ORTHO05D008087 7.0e-131 471.1 308 74.7
Aqoxy5G01962 Aquilegia oxysepala HOM05D006521 ORTHO05D008087 1.3e-124 450.3 308 72.1
PSO447G0171 Papaver somniferum HOM05D006521 ORTHO05D008087 5.7e-117 424.9 308 67.9
PSO210G2459 Papaver somniferum HOM05D006521 ORTHO05D008087 2.8e-116 422.5 308 67.2
Dinv00937 Davidia involucrata HOM05D006521 ORTHO05D008087 7.8e-114 414.5 314 66.2
Dinv16313 Davidia involucrata HOM05D006521 ORTHO05D008087 1.7e-113 413.3 314 65.9
Duzib147G0857 Durio zibethinus HOM05D006521 ORTHO05D008087 1.4e-110 403.7 311 63.7
THA.LOC104807700 Tarenaya hassleriana HOM05D006521 ORTHO05D008087 1.8e-110 403.3 309 62.5
THA.LOC104824871 Tarenaya hassleriana HOM05D006521 ORTHO05D008087 1.8e-110 403.3 309 62.8
Lj6g0010661 Lotus japonicus HOM05D006521 ORTHO05D008087 3.0e-110 402.5 306 63.1
ClCG01G018970 Citrullus lanatus HOM05D006521 ORTHO05D008087 5.2e-110 401.7 308 63.3
Lalb_Chr11g0075241 Lupinus albus HOM05D006521 ORTHO05D008087 8.9e-110 401.0 306 62.7
Thecc.01G106200 Theobroma cacao HOM05D006521 ORTHO05D008087 8.9e-110 401.0 311 63.3
MELO3C007776.2 Cucumis melo HOM05D006521 ORTHO05D008087 1.5e-109 400.2 308 63.3
CANSAT01G1058 Cannabis sativa HOM05D006521 ORTHO05D008087 4.4e-109 398.7 318 64.8
Cpa.g.sc20.228 Carica papaya HOM05D006521 ORTHO05D008087 4.4e-109 398.7 309 61.2
Haze_24978 Corylus avellana HOM05D006521 ORTHO05D008087 7.5e-109 397.9 308 72.7
Hma1.2p1_0011F.1_g007170 Hydrangea macrophylla HOM05D006521 ORTHO05D008087 7.5e-109 397.9 314 63.7
CiPaw.03G138700 Carya illinoinensis HOM05D006521 ORTHO05D008087 1.3e-108 397.1 307 73.6
TWI74G1358 Tripterygium wilfordii HOM05D006521 ORTHO05D008087 8.3e-108 394.4 317 63.1
CsaV3_6G045650 Cucumis sativus L. HOM05D006521 ORTHO05D008087 1.4e-107 393.7 308 62.7
QL06p050323 Quercus lobata HOM05D006521 ORTHO05D008087 1.8e-107 393.3 308 64.6
Ca_16545_v3 Cicer arietinum L. HOM05D006521 ORTHO05D008087 2.4e-107 392.9 306 62.4
AT4G39820 Arabidopsis thaliana HOM05D006521 ORTHO05D008087 9.2e-107 391.0 309 59.9
CARHR246880 Cardamine hirsuta HOM05D006521 ORTHO05D008087 9.2e-107 391.0 308 60.4
Gorai.007G061700 Gossypium raimondii HOM05D006521 ORTHO05D008087 9.2e-107 391.0 311 61.1
VMungo1383G3636 Vigna mungo HOM05D006521 ORTHO05D008087 9.2e-107 391.0 308 62.7
Glyma.18G019200 Glycine max HOM05D006521 ORTHO05D008087 1.2e-106 390.6 307 62.5
Atru.chr4.229 Acer truncatum HOM05D006521 ORTHO05D008087 1.6e-106 390.2 309 63.4
arahy.Tifrunner.gnm1.ann1.2NAN3W Arachis hypogaea HOM05D006521 ORTHO05D008087 1.6e-106 390.2 310 61.0
Carub.0007s0173 Capsella rubella HOM05D006521 ORTHO05D008087 1.6e-106 390.2 309 59.5
arahy.Tifrunner.gnm1.ann1.IK9JFE Arachis hypogaea HOM05D006521 ORTHO05D008087 2.0e-106 389.8 310 61.0
Duzib264G0874 Durio zibethinus HOM05D006521 ORTHO05D008087 2.7e-106 389.4 311 62.4
Aa31LG6G15450 Aethionema arabicum HOM05D006521 ORTHO05D008087 4.6e-106 388.7 309 59.5
Cfa002704 Carpinus fangiana HOM05D006521 ORTHO05D008087 4.6e-106 388.7 308 71.8
Thhalv10025314m.g Eutrema salsugineum HOM05D006521 ORTHO05D008087 4.6e-106 388.7 309 58.3
AL7G12040 Arabidopsis lyrata HOM05D006521 ORTHO05D008087 7.8e-106 387.9 309 59.2
Medtr3g087760 Medicago truncatula HOM05D006521 ORTHO05D008087 1.0e-105 387.5 306 61.8
Phvul.001G250400 Phaseolus vulgaris HOM05D006521 ORTHO05D008087 1.7e-105 386.7 308 62.0
Psat5g088760 Pisum sativum HOM05D006521 ORTHO05D008087 2.3e-105 386.3 306 61.4
Manes.12G138400 Manihot esculenta HOM05D006521 ORTHO05D008087 3.9e-105 385.6 318 62.3
Gorai.008G103700 Gossypium raimondii HOM05D006521 ORTHO05D008087 5.0e-105 385.2 310 61.3
TWI77G0511 Tripterygium wilfordii HOM05D006521 ORTHO05D008087 5.0e-105 385.2 310 62.6
Sp7g36070 Schrenkiella parvula HOM05D006521 ORTHO05D008087 6.6e-105 384.8 309 59.2
Glyma.11G238100 Glycine max HOM05D006521 ORTHO05D008087 1.1e-104 384.0 307 61.6
Sed0013283 Sechium edule HOM05D006521 ORTHO05D008087 2.5e-104 382.9 307 60.3
Sed0002886 Sechium edule HOM05D006521 ORTHO05D008087 4.3e-104 382.1 308 61.4
TPR.G22881 Trifolium pratense HOM05D006521 ORTHO05D008087 4.7e-103 378.6 296 62.2
Ciclev10025891m.g Citrus clementina HOM05D006521 ORTHO05D008087 4.0e-102 375.6 311 61.1
Prupe.3G102100 Prunus persica HOM05D006521 ORTHO05D008087 1.2e-101 374.0 308 62.0
C03p78340 Brassica napus HOM05D006521 ORTHO05D008087 1.5e-101 373.6 309 59.9
BolC3t20094H Brassica oleracea HOM05D006521 ORTHO05D008087 1.5e-101 373.6 309 59.9
A08p23330 Brassica napus HOM05D006521 ORTHO05D008087 2.6e-101 372.9 309 59.9
BraA08t34287Z Brassica rapa HOM05D006521 ORTHO05D008087 2.6e-101 372.9 309 59.9
PGR004G2411 Punica granatum HOM05D006521 ORTHO05D008087 7.5e-101 371.3 309 61.5
Eucgr.I00394 Eucalyptus grandis HOM05D006521 ORTHO05D008087 1.7e-100 370.2 311 59.8
HanXRQChr16g0527921 Helianthus annuus HOM05D006521 ORTHO05D008087 1.1e-99 367.5 311 60.1
FAN19G2752 Fragaria x ananassa HOM05D006521 ORTHO05D008087 4.1e-99 365.5 309 59.9
RcHm_v2.0_Chr2g0115391 Rosa chinensis HOM05D006521 ORTHO05D008087 7.0e-99 364.8 309 60.2
FvH4_1g21530 Fragaria vesca HOM05D006521 ORTHO05D008087 1.2e-98 364.0 309 59.5
ECA234G2647 Erigeron canadensis HOM05D006521 ORTHO05D008087 2.0e-98 363.2 313 59.7
FAN28G0591 Fragaria x ananassa HOM05D006521 ORTHO05D008087 2.7e-98 362.8 309 58.6
FAN23G2501 Fragaria x ananassa HOM05D006521 ORTHO05D008087 4.6e-98 362.1 309 59.5
Lsat_1_v5_gn_4_21220 Lactuca sativa HOM05D006521 ORTHO05D008087 6.0e-98 361.7 314 60.5
Potri.005G079300 Populus trichocarpa HOM05D006521 ORTHO05D008087 1.5e-96 357.1 307 59.3
Sc16g0005450 Simmondsia chinensis HOM05D006521 ORTHO05D008087 1.9e-96 356.7 310 57.4
Rhsim10G0157900 Rhododendron simsii HOM05D006521 ORTHO05D008087 1.2e-95 354.0 309 57.9
SGA_v2.0_scaffold2G01323 Striga asiatica HOM05D006521 ORTHO05D008087 1.1e-94 350.9 319 56.7
Lj4A881T25 Lonicera japonica HOM05D006521 ORTHO05D008087 2.3e-94 349.7 318 59.4
Lsat_1_v5_gn_2_67800 Lactuca sativa HOM05D006521 ORTHO05D008087 1.2e-93 347.4 319 58.0
Cc07_g15580 Coffea canephora HOM05D006521 ORTHO05D008087 1.5e-93 347.1 318 56.6
SalBow3G0008 Salvia bowleyana HOM05D006521 ORTHO05D008087 3.4e-93 345.9 319 57.4
AUR62002034 Chenopodium quinoa HOM05D006521 ORTHO05D008087 9.9e-93 344.4 308 55.2
Ah.02g122760 Amaranthus hybridus HOM05D006521 ORTHO05D008087 3.7e-92 342.4 318 53.8
AUR62003763 Chenopodium quinoa HOM05D006521 ORTHO05D008087 1.9e-91 340.1 308 54.9
SHI11594 Sapria himalayana HOM05D006521 ORTHO05D008087 2.4e-91 339.7 307 57.3
CDE10G1235 Ceratophyllum demersum HOM05D006521 ORTHO05D008087 3.2e-91 339.3 283 59.7
Oeu053565.1 Olea europaea HOM05D006521 ORTHO05D008087 3.2e-91 339.3 321 57.3
Sabra05G0065200 Salix brachista HOM05D006521 ORTHO05D004292 3.2e-91 339.3 302 57.0
HanXRQChr15g0471711 Helianthus annuus HOM05D006521 ORTHO05D008087 5.4e-91 338.6 308 57.1
Migut.H02388 Erythranthe guttata HOM05D006521 ORTHO05D008087 6.0e-90 335.1 319 54.9
Ah.02g120360 Amaranthus hybridus HOM05D006521 ORTHO05D008087 7.8e-90 334.7 318 52.5
Nitab4.5_0000715g0180 Nicotiana tabacum HOM05D006521 ORTHO05D008087 1.0e-89 334.3 316 55.1
Sopen05g030360 Solanum pennellii HOM05D006521 ORTHO05D008087 6.6e-89 331.6 311 54.7
DCAR_011503 Daucus carota HOM05D006521 ORTHO05D008087 1.1e-88 330.9 323 55.1
Solyc05g051840.1 Solanum lycopersicum HOM05D006521 ORTHO05D008087 1.9e-88 330.1 311 54.0
PGSC0003DMG400021832 Solanum tuberosum HOM05D006521 ORTHO05D008087 4.3e-88 328.9 311 54.0
unitig_32.g11814 Utricularia gibba HOM05D006521 ORTHO05D008087 1.2e-87 327.4 311 53.1
ATR0789G153 Amborella trichopoda HOM05D006521 ORTHO05D008087 1.6e-87 327.0 436 42.4
HPP92_016137 Vanilla planifolia HOM05D006521 ORTHO05D008087 4.0e-86 322.4 317 51.7
Hund13498 Selenicereus undatus HOM05D006521 ORTHO05D008087 3.4e-85 319.3 303 54.1
CAN.G1494.2 Capsicum annuum HOM05D006521 ORTHO05D008087 4.4e-85 318.9 313 52.7
BcaNung05326 Brassica carinata HOM05D006521 ORTHO05D008087 1.7e-76 290.4 233 60.9
Actinidia36602 Actinidia chinensis HOM05D006521 ORTHO05D008087 2.4e-75 286.6 241 58.9
Lj4A883T21 Lonicera japonica HOM05D006521 ORTHO05D008087 3.5e-74 282.7 307 51.5
Atru.chr1.3715 Acer truncatum HOM05D006521 ORTHO05D008087 8.7e-73 278.1 236 61.4
Nitab4.5_0005597g0010 Nicotiana tabacum HOM05D006521 ORTHO05D008087 8.1e-71 271.6 312 47.8
SEGI_26188 Sequoiadendron giganteum HOM05D006521 ORTHO05D008087 4.8e-63 245.7 511 30.9
SMO353G0213 Selaginella moellendorffii HOM05D006521 ORTHO05D008087 3.4e-61 239.6 312 41.0
COL.COLO4_09911 Corchorus olitorius HOM05D006521 ORTHO05D008087 4.2e-59 232.6 309 43.7
EL10Ac6g15070 Beta vulgaris HOM05D006521 ORTHO05D008087 6.0e-58 228.8 201 58.7
AagrBONN_evm.TU.Sc2ySwM_368.767 Anthoceros agrestis HOM05D006521 ORTHO05D008087 1.3e-57 227.6 368 36.4
Mapoly0165s0018 Marchantia polymorpha HOM05D006521 ORTHO05D008087 3.0e-57 226.5 395 34.4
A01p00740 Brassica napus HOM05D006521 ORTHO05D008087 4.3e-56 222.6 225 53.3
Os02g0550400 Oryza sativa ssp. japonica HOM05D006521 ORTHO05D008087 1.1e-54 218.0 311 40.8
Pp3c19_5060 Physcomitrium patens HOM05D006521 ORTHO05D008087 1.8e-54 217.2 376 33.8
Pp3c22_3810 Physcomitrium patens HOM05D006521 ORTHO05D008087 2.4e-54 216.9 391 33.8
C01p00850 Brassica napus HOM05D006521 ORTHO05D008087 1.5e-53 214.2 309 41.7
ECA238G1388 Erigeron canadensis HOM05D001700 ORTHO05D002131 1.6e-47 194.1 164 59.1
Atru.chr1.3697 Acer truncatum HOM05D006521 ORTHO05D008087 3.7e-47 193.0 151 65.6
Pp3c10_9400 Physcomitrium patens HOM05D006521 ORTHO05D008087 3.1e-46 189.9 343 31.2
ECA238G2228 Erigeron canadensis HOM05D006521 ORTHO05D008087 5.3e-46 189.1 159 59.1
Pp3c14_5890 Physcomitrium patens HOM05D006521 ORTHO05D008087 1.4e-43 181.0 367 31.6
TAR636G0192 Trochodendron aralioides HOM05D006521 ORTHO05D008087 3.3e-40 169.9 121 71.1
BcaNung00904 Brassica carinata HOM05D006521 ORTHO05D008087 3.6e-34 149.8 117 62.4
Peaxi162Scf00295g00033 Petunia axillaris HOM05D006521 ORTHO05D008087 3.3e-32 143.3 176 46.0
CBR_g34484 Chara braunii HOM05D006521 ORTHO05D008087 8.2e-31 138.7 256 33.2
HanXRQChr10g0288811 Helianthus annuus HOM05D006521 ORTHO05D008087 4.7e-26 122.9 105 61.0
FAN13G3020 Fragaria x ananassa HOM05D005489 ORTHO05D006629 1.3e-23 114.8 142 42.3
GSVIVG01022164001 Vitis vinifera HOM05D006521 ORTHO05D008087 3.5e-13 80.1 71 56.3
CDE10G1372 Ceratophyllum demersum HOM05D006521 ORTHO05D008087 1.0e-12 78.6 58 60.3
PRCOL_00001846 Prasinoderma coloniale HOM05D006521 ORTHO05D008087 2.4e-06 57.4 271 22.9


User provided reference genes

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