Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g04900 Nelumbo nucifera HOM05D007048 ORTHO05D008811 2.4e-50 201.8 100 100.0
PSO339G2722 Papaver somniferum HOM05D007048 ORTHO05D008811 4.6e-25 117.9 84 70.2
Dinv23221 Davidia involucrata HOM05D007048 ORTHO05D008811 6.0e-25 117.5 84 69.0
PSO384G0987 Papaver somniferum HOM05D007048 ORTHO05D008811 1.3e-24 116.3 84 69.0
Actinidia18303 Actinidia chinensis HOM05D007048 ORTHO05D008811 1.7e-24 115.9 84 69.0
Cfa018710 Carpinus fangiana HOM05D007048 ORTHO05D008811 1.7e-24 115.9 82 70.7
Prupe.5G142300 Prunus persica HOM05D007048 ORTHO05D008811 1.7e-24 115.9 84 69.0
Haze_07101 Corylus avellana HOM05D007048 ORTHO05D008811 3.0e-24 115.2 73 78.1
FvH4_5g09450 Fragaria vesca HOM05D007048 ORTHO05D008811 3.9e-24 114.8 79 70.9
FAN18G3224 Fragaria x ananassa HOM05D007048 ORTHO05D008811 3.9e-24 114.8 79 70.9
Sc22g0003410 Simmondsia chinensis HOM05D007048 ORTHO05D008811 3.9e-24 114.8 84 69.0
FAN04G3007 Fragaria x ananassa HOM05D007048 ORTHO05D008811 6.6e-24 114.0 84 66.7
Aqoxy3G01543 Aquilegia oxysepala HOM05D007048 ORTHO05D008811 8.7e-24 113.6 82 70.7
SalBow1G8421 Salvia bowleyana HOM05D007048 ORTHO05D008811 1.5e-23 112.8 84 65.5
Duzib068G0404 Durio zibethinus HOM05D007048 ORTHO05D008811 2.5e-23 112.1 79 72.2
MD14G1147700 Malus domestica HOM05D007048 ORTHO05D008811 3.3e-23 111.7 84 65.5
Manes.14G045100 Manihot esculenta HOM05D007048 ORTHO05D008811 3.3e-23 111.7 82 68.3
TWI39G0039 Tripterygium wilfordii HOM05D007048 ORTHO05D008811 4.3e-23 111.3 75 72.0
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 5.6e-23 110.9 84 64.3
Hma1.2p1_0664F.1_g199000 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 5.6e-23 110.9 84 64.3
MD06G1131300 Malus domestica HOM05D007048 ORTHO05D008811 5.6e-23 110.9 84 65.5
Migut.D01184 Erythranthe guttata HOM05D007048 ORTHO05D008811 9.6e-23 110.2 84 64.3
Sopen07g028330 Solanum pennellii HOM05D007048 ORTHO05D008820 1.3e-22 109.8 73 75.3
Peaxi162Scf01168g00014 Petunia axillaris HOM05D007048 ORTHO05D008811 1.6e-22 109.4 75 72.0
RcHm_v2.0_Chr7g0188741 Rosa chinensis HOM05D007048 ORTHO05D008811 1.6e-22 109.4 82 65.9
Rhsim08G0196900 Rhododendron simsii HOM05D007048 ORTHO05D008811 2.1e-22 109.0 75 72.0
CiPaw.11G000300 Carya illinoinensis HOM05D007048 ORTHO05D008811 2.8e-22 108.6 82 67.1
TAR475G0007 Trochodendron aralioides HOM05D007048 ORTHO05D008811 2.8e-22 108.6 81 67.9
TAR629G1913 Trochodendron aralioides HOM05D007048 ORTHO05D008811 2.8e-22 108.6 81 67.9
MELO3C035737.2 Cucumis melo HOM05D007048 ORTHO05D008811 4.8e-22 107.8 75 72.0
Ciclev10033023m.g Citrus clementina HOM05D007048 ORTHO05D008811 8.1e-22 107.1 76 69.7
MBI07_g41901_MAGBIO Magnolia biondii HOM05D007048 ORTHO05D008811 8.1e-22 107.1 77 66.2
QL10p000556 Quercus lobata HOM05D007048 ORTHO05D008811 1.4e-21 106.3 84 63.1
Solyc07g054400.3 Solanum lycopersicum HOM05D007048 ORTHO05D008811 1.4e-21 106.3 73 74.0
PGSC0003DMG400018389 Solanum tuberosum HOM05D007048 ORTHO05D008811 1.4e-21 106.3 73 72.6
CsaV3_1G009910 Cucumis sativus L. HOM05D007048 ORTHO05D008811 1.8e-21 105.9 75 70.7
vmacro19180 Vaccinium macrocarpon HOM05D007048 ORTHO05D008811 1.8e-21 105.9 76 72.4
Atru.chr6.1912 Acer truncatum HOM05D007048 ORTHO05D008811 4.0e-21 104.8 83 60.2
CAN.G521.6 Capsicum annuum HOM05D007048 ORTHO05D008811 5.3e-21 104.4 73 69.9
Sed0017197 Sechium edule HOM05D007048 ORTHO05D008811 6.9e-21 104.0 75 72.0
Sabra15G0126100 Salix brachista HOM05D007048 ORTHO05D008811 9.0e-21 103.6 79 68.4
Potri.015G105900 Populus trichocarpa HOM05D007048 ORTHO05D008811 1.2e-20 103.2 80 67.5
Hund10045 Selenicereus undatus HOM05D007048 ORTHO05D008811 1.2e-20 103.2 80 66.2
Gohir.D07G051200 Gossypium hirsutum HOM05D007048 ORTHO05D008811 1.5e-20 102.8 73 69.9
Gorai.001G054300 Gossypium raimondii HOM05D007048 ORTHO05D008811 1.5e-20 102.8 73 69.9
EL10Ac5g11295 Beta vulgaris HOM05D007048 ORTHO05D008811 2.0e-20 102.4 80 65.0
Nitab4.5_0003119g0030 Nicotiana tabacum HOM05D007048 ORTHO05D008811 2.0e-20 102.4 82 64.6
Thecc.03G140000 Theobroma cacao HOM05D007048 ORTHO05D008811 2.0e-20 102.4 82 63.4
AUR62009534 Chenopodium quinoa HOM05D007048 ORTHO05D008811 2.6e-20 102.1 80 65.0
AUR62044083 Chenopodium quinoa HOM05D007048 ORTHO05D008811 2.6e-20 102.1 80 65.0
ECA246G0638 Erigeron canadensis HOM05D003971 ORTHO05D004762 2.6e-20 102.1 77 64.9
AT5G50930 Arabidopsis thaliana HOM05D007048 ORTHO05D008811 3.4e-20 101.7 80 62.5
Cc04_g05890 Coffea canephora HOM05D007048 ORTHO05D008811 3.4e-20 101.7 75 66.7
Gohir.A07G046900 Gossypium hirsutum HOM05D007048 ORTHO05D008811 3.4e-20 101.7 73 68.5
Nitab4.5_0002584g0070 Nicotiana tabacum HOM05D007048 ORTHO05D008811 3.4e-20 101.7 82 64.6
Sp6g13100 Schrenkiella parvula HOM05D007048 ORTHO05D008811 3.4e-20 101.7 80 62.5
GSVIVG01008645001 Vitis vinifera HOM05D007048 ORTHO05D008811 4.5e-20 101.3 83 62.7
BcaNung07188 Brassica carinata HOM05D007048 ORTHO05D008811 5.8e-20 100.9 82 59.8
A03p16450 Brassica napus HOM05D007048 ORTHO05D008811 5.8e-20 100.9 82 59.8
C03p19340 Brassica napus HOM05D007048 ORTHO05D008811 5.8e-20 100.9 82 59.8
BolC3t14320H Brassica oleracea HOM05D007048 ORTHO05D008811 5.8e-20 100.9 82 59.8
BraA03t10934Z Brassica rapa HOM05D007048 ORTHO05D008811 5.8e-20 100.9 82 59.8
AUR62041697 Chenopodium quinoa HOM05D007048 ORTHO05D008811 5.8e-20 100.9 80 65.0
AL8G25120 Arabidopsis lyrata HOM05D007048 ORTHO05D008811 7.6e-20 100.5 80 61.2
CANSAT56G3230 Cannabis sativa HOM05D007048 ORTHO05D008811 7.6e-20 100.5 87 59.8
CANSAT56G3502 Cannabis sativa HOM05D007048 ORTHO05D008811 7.6e-20 100.5 87 59.8
Carub.0008s1094 Capsella rubella HOM05D007048 ORTHO05D008811 9.9e-20 100.1 80 62.5
TWI14G0368 Tripterygium wilfordii HOM05D007048 ORTHO05D008811 2.9e-19 98.6 75 64.0
Aa31LG3G7430 Aethionema arabicum HOM05D007048 ORTHO05D008811 4.9e-19 97.8 80 58.8
arahy.Tifrunner.gnm1.ann1.QNIR3T Arachis hypogaea HOM05D007048 ORTHO05D008811 4.9e-19 97.8 79 62.0
Ah.02g114610 Amaranthus hybridus HOM05D007048 ORTHO05D008811 6.4e-19 97.4 83 59.0
HanXRQChr10g0316061 Helianthus annuus HOM05D007048 ORTHO05D008811 6.4e-19 97.4 79 62.0
CARHR257290 Cardamine hirsuta HOM05D007048 ORTHO05D008811 8.4e-19 97.1 80 60.0
Cpa.g.sc13.165 Carica papaya HOM05D007048 ORTHO05D008811 8.4e-19 97.1 82 59.8
ClCG03G004020 Citrullus lanatus HOM05D007048 ORTHO05D008811 8.4e-19 97.1 84 63.1
PGR031G3072 Punica granatum HOM05D007048 ORTHO05D008811 8.4e-19 97.1 82 62.2
VMungo1309G1627 Vigna mungo HOM05D007048 ORTHO05D008811 8.4e-19 97.1 71 67.6
Phvul.009G161500 Phaseolus vulgaris HOM05D007048 ORTHO05D008811 1.1e-18 96.7 71 66.2
arahy.Tifrunner.gnm1.ann1.8FCI62 Arachis hypogaea HOM05D007048 ORTHO05D008811 1.4e-18 96.3 79 60.8
CSS0012628 Camellia sinensis var. sinensis HOM05D007048 ORTHO05D008811 1.4e-18 96.3 69 73.9
Thhalv10014960m.g Eutrema salsugineum HOM05D007048 ORTHO05D008811 1.9e-18 95.9 80 58.8
Glyma.04G201000 Glycine max HOM05D007048 ORTHO05D008811 1.9e-18 95.9 77 62.3
PGR031G2395 Punica granatum HOM05D007048 ORTHO05D008811 1.9e-18 95.9 82 61.0
PGR031G3844 Punica granatum HOM05D007048 ORTHO05D008811 3.2e-18 95.1 82 61.0
Psat5g055240 Pisum sativum HOM05D007048 ORTHO05D008811 9.3e-18 93.6 72 62.5
FAN13G1437 Fragaria x ananassa HOM05D007048 ORTHO05D008811 1.6e-17 92.8 73 63.0
Lsat_1_v5_gn_5_10141 Lactuca sativa HOM05D007048 ORTHO05D008811 1.6e-17 92.8 89 56.2
BcaB01g01606 Brassica carinata HOM05D007048 ORTHO05D008811 6.0e-17 90.9 86 55.8
Lj1g0016164 Lotus japonicus HOM05D007048 ORTHO05D008811 6.0e-17 90.9 76 56.6
Medtr3g098660 Medicago truncatula HOM05D007048 ORTHO05D008811 6.0e-17 90.9 76 57.9
Os04g0397700 Oryza sativa ssp. japonica HOM05D007048 ORTHO05D008811 7.9e-17 90.5 67 67.2
Lalb_Chr08g0237541 Lupinus albus HOM05D007048 ORTHO05D008811 1.3e-16 89.7 71 59.2
SGA_v2.0_scaffold40G15679 Striga asiatica HOM05D007048 ORTHO05D008811 1.3e-16 89.7 112 46.4
Eucgr.K02194 Eucalyptus grandis HOM05D007048 ORTHO05D008811 3.0e-16 88.6 102 52.0
Glyma.06G164400 Glycine max HOM05D007048 ORTHO05D008811 3.0e-16 88.6 71 62.0
TPR.G21584 Trifolium pratense HOM05D007048 ORTHO05D008811 3.0e-16 88.6 76 56.6
arahy.Tifrunner.gnm1.ann1.CS080T Arachis hypogaea HOM05D007048 ORTHO05D008811 3.9e-16 88.2 79 58.2
arahy.Tifrunner.gnm1.ann1.DD5QTF Arachis hypogaea HOM05D007048 ORTHO05D008811 5.1e-16 87.8 79 57.0
HPP92_008245 Vanilla planifolia HOM05D007048 ORTHO05D008811 5.1e-16 87.8 68 63.2
PGR044G0448 Punica granatum HOM05D007048 ORTHO05D008811 6.2e-14 80.9 81 53.1
BcaB05g23641 Brassica carinata HOM05D007048 ORTHO05D008811 2.4e-13 79.0 75 54.7
unitig_747.g21321 Utricularia gibba HOM05D007048 ORTHO05D008811 5.3e-13 77.8 66 56.1
SEGI_10153 Sequoiadendron giganteum HOM05D007048 ORTHO05D008811 2.0e-12 75.9 79 53.2
Nn3g16280 Nelumbo nucifera HOM05D007048 ORTHO05D008811 4.5e-12 74.7 39 92.3
Hma1.2p1_0664F.1_g198980 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 7.6e-12 73.9 45 73.3
Hma1.2p1_0664F.1_g198990 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 7.6e-12 73.9 45 73.3
ATR0582G167 Amborella trichopoda HOM05D007048 ORTHO05D008811 1.0e-11 73.6 63 55.6
CDE05G0753 Ceratophyllum demersum HOM05D000512 ORTHO05D000861 1.0e-08 63.5 40 72.5
AagrBONN_evm.TU.Sc2ySwM_362.2725 Anthoceros agrestis HOM05D007048 ORTHO05D008811 1.8e-08 62.8 76 42.1
Pp3c2_1780 Physcomitrium patens HOM05D007048 ORTHO05D008811 1.1e-07 60.1 73 45.2
Oeu009260.1 Olea europaea HOM05D007048 ORTHO05D008811 7.4e-07 57.4 39 69.2
Mapoly0109s0028 Marchantia polymorpha HOM05D007048 ORTHO05D008811 1.6e-06 56.2 72 40.3
Zm00001eb084850 Zea mays HOM05D007048 ORTHO05D008811 2.1e-06 55.8 39 66.7


User provided reference genes

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