Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g04679 Nelumbo nucifera HOM05D001441 ORTHO05D001332 1.6e-50 202.6 110 100.0
Nn2g12397 Nelumbo nucifera HOM05D001441 ORTHO05D001332 1.0e-09 67.0 34 85.3
Nn8g39909 Nelumbo nucifera HOM05D001441 ORTHO05D001332 3.3e-08 62.0 35 80.0
Nn4g24610 Nelumbo nucifera HOM05D001441 ORTHO05D001332 5.6e-08 61.2 73 49.3
MELO3C026734.2 Cucumis melo HOM05D001441 ORTHO05D001332 1.3e-07 60.1 34 76.5
Rhsim12G0187100 Rhododendron simsii HOM05D001441 ORTHO05D001332 2.1e-07 59.3 34 76.5
arahy.Tifrunner.gnm1.ann1.8P32VS Arachis hypogaea HOM05D001441 ORTHO05D001332 2.8e-07 58.9 34 76.5
arahy.Tifrunner.gnm1.ann1.LYRN80 Arachis hypogaea HOM05D001441 ORTHO05D001332 2.8e-07 58.9 34 76.5
Cpa.g.sc10.61 Carica papaya HOM05D001441 ORTHO05D001332 2.8e-07 58.9 34 76.5
COL.COLO4_26736 Corchorus olitorius HOM05D001441 ORTHO05D001332 2.8e-07 58.9 34 76.5
Glyma.07G022000 Glycine max HOM05D001441 ORTHO05D001332 2.8e-07 58.9 34 76.5
VMungo0331G0077 Vigna mungo HOM05D001441 ORTHO05D001332 2.8e-07 58.9 34 76.5
Cfa001874 Carpinus fangiana HOM05D001441 ORTHO05D001332 3.6e-07 58.5 34 76.5
MBI15_g18245_MAGBIO Magnolia biondii HOM05D001441 ORTHO05D001332 3.6e-07 58.5 34 76.5
MBI15_g43155_MAGBIO Magnolia biondii HOM05D001441 ORTHO05D001332 3.6e-07 58.5 34 76.5
Manes.11G067200 Manihot esculenta HOM05D001441 ORTHO05D001332 4.8e-07 58.2 34 73.5
TWI18G1326 Tripterygium wilfordii HOM05D001441 ORTHO05D001332 4.8e-07 58.2 34 73.5
Cc04_g05180 Coffea canephora HOM05D007168 ORTHO05D009495 6.2e-07 57.8 34 76.5
Oeu051572.1 Olea europaea HOM05D001441 ORTHO05D001332 6.2e-07 57.8 34 73.5
Phvul.010G162400 Phaseolus vulgaris HOM05D001441 ORTHO05D001332 6.2e-07 57.8 34 73.5
Potri.001G043600 Populus trichocarpa HOM05D001441 ORTHO05D001332 6.2e-07 57.8 34 73.5
QL05p035664 Quercus lobata HOM05D001441 ORTHO05D001332 8.1e-07 57.4 34 70.6
TWI75G1478 Tripterygium wilfordii HOM05D001441 ORTHO05D001332 8.1e-07 57.4 34 73.5
unitig_0.g355 Utricularia gibba HOM05D001441 ORTHO05D001332 8.1e-07 57.4 34 76.5
MSTRG.4675 Avicennia marina HOM05D001441 ORTHO05D001332 1.1e-06 57.0 33 72.7
Haze_16674 Corylus avellana HOM05D001441 ORTHO05D001332 1.1e-06 57.0 34 73.5
CSS0049769 Camellia sinensis var. sinensis HOM05D001441 ORTHO05D001332 1.4e-06 56.6 34 76.5
CiPaw.01G255300 Carya illinoinensis HOM05D001441 ORTHO05D001332 1.4e-06 56.6 34 73.5
CsaV3_3G032750 Cucumis sativus L. HOM05D001441 ORTHO05D001332 1.4e-06 56.6 34 73.5
Potri.003G183300 Populus trichocarpa HOM05D001441 ORTHO05D001332 1.4e-06 56.6 34 70.6
Sabra03G0133900 Salix brachista HOM05D001441 ORTHO05D001332 1.4e-06 56.6 34 70.6
THA.LOC104812414 Tarenaya hassleriana HOM05D001441 ORTHO05D001332 1.4e-06 56.6 34 73.5
Thecc.06G042600 Theobroma cacao HOM05D001441 ORTHO05D001332 1.4e-06 56.6 34 70.6
Thecc.06G042800 Theobroma cacao HOM05D001441 ORTHO05D001332 1.4e-06 56.6 34 70.6
GSVIVG01015979001 Vitis vinifera HOM05D001441 ORTHO05D001332 1.4e-06 56.6 34 76.5
Gohir.A05G118500 Gossypium hirsutum HOM05D001441 ORTHO05D001332 1.8e-06 56.2 34 70.6
Hma1.2p1_0329F.1_g127140 Hydrangea macrophylla HOM05D001441 ORTHO05D001332 1.8e-06 56.2 34 70.6
PGR102G2032 Punica granatum HOM05D001441 ORTHO05D001332 2.4e-06 55.8 34 70.6
SalBow6G4665 Salvia bowleyana HOM05D001441 ORTHO05D001332 2.4e-06 55.8 34 76.5
Ciclev10026582m.g Citrus clementina HOM05D001441 ORTHO05D001332 4.0e-06 55.1 34 73.5
Prupe.3G099600 Prunus persica HOM05D001441 ORTHO05D001332 4.0e-06 55.1 34 70.6
MD17G1223900 Malus domestica HOM05D001441 ORTHO05D001332 5.3e-06 54.7 34 70.6
ClCG10G012890 Citrullus lanatus HOM05D001441 ORTHO05D001332 6.9e-06 54.3 34 67.6
Dinv21415 Davidia involucrata HOM05D001441 ORTHO05D001332 6.9e-06 54.3 34 70.6
Eucgr.F03968 Eucalyptus grandis HOM05D001441 ORTHO05D001332 6.9e-06 54.3 34 73.5
Gohir.D05G119400 Gossypium hirsutum HOM05D001441 ORTHO05D001332 6.9e-06 54.3 34 67.6
Gorai.009G123000 Gossypium raimondii HOM05D001441 ORTHO05D001332 6.9e-06 54.3 34 67.6
vmacro16850 Vaccinium macrocarpon HOM05D001441 ORTHO05D001332 6.9e-06 54.3 34 70.6
Hma1.2p1_0109F.1_g052640 Hydrangea macrophylla HOM05D001441 ORTHO05D001332 9.0e-06 53.9 34 73.5


User provided reference genes

Program Settings