Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g04287 Nelumbo nucifera HOM05D003914 ORTHO05D001189 5.0e-23 110.2 52 100.0
Nn5g28958 Nelumbo nucifera HOM05D003914 ORTHO05D001189 2.5e-14 81.3 41 92.7
Lj5A78T80 Lonicera japonica HOM05D003914 ORTHO05D001189 8.3e-10 66.2 41 75.6
Actinidia18235 Actinidia chinensis HOM05D003914 ORTHO05D001189 1.4e-09 65.5 41 70.7
Os03g0172000 Oryza sativa ssp. japonica HOM05D003914 ORTHO05D001189 3.1e-09 64.3 41 63.4
Cc04_g04890 Coffea canephora HOM05D003914 ORTHO05D001189 4.1e-09 63.9 41 68.3
MBI05_g01294_MAGBIO Magnolia biondii HOM05D003914 ORTHO05D001189 9.1e-09 62.8 41 70.7
Zm00001eb402160 Zea mays HOM05D003914 ORTHO05D001189 1.6e-08 62.0 41 63.4
Dinv21395 Davidia involucrata HOM05D003914 ORTHO05D001189 2.0e-08 61.6 41 68.3
PSO210G6726 Papaver somniferum HOM05D003914 ORTHO05D001189 2.0e-08 61.6 41 65.9
TAR625G0765 Trochodendron aralioides HOM05D003914 ORTHO05D001189 3.5e-08 60.8 41 68.3
TWI12G1414 Tripterygium wilfordii HOM05D003914 ORTHO05D001189 4.5e-08 60.5 41 70.7
PSO447G0077 Papaver somniferum HOM05D003914 ORTHO05D001189 1.0e-07 59.3 41 63.4
Zm00001eb242170 Zea mays HOM05D003914 ORTHO05D001189 1.3e-07 58.9 41 61.0
Aqoxy7G03430 Aquilegia oxysepala HOM05D003914 ORTHO05D001189 1.7e-07 58.5 41 65.9
Glyma.14G005800 Glycine max HOM05D003914 ORTHO05D001189 1.7e-07 58.5 41 58.5
LjContig00081g0020682 Lotus japonicus HOM05D003914 ORTHO05D001189 2.9e-07 57.8 41 58.5
Oeu010367.1 Olea europaea HOM05D003914 ORTHO05D001189 3.8e-07 57.4 41 61.0
Thecc.06G038600 Theobroma cacao HOM05D003914 ORTHO05D001189 3.8e-07 57.4 41 63.4
HanXRQChr02g0034961 Helianthus annuus HOM05D003914 ORTHO05D001189 5.0e-07 57.0 47 57.4
HanXRQChr03g0080251 Helianthus annuus HOM05D003914 ORTHO05D001189 5.0e-07 57.0 47 57.4
HanXRQChr08g0217431 Helianthus annuus HOM05D003914 ORTHO05D001189 5.0e-07 57.0 47 57.4
CANSAT56G3222 Cannabis sativa HOM05D003914 ORTHO05D001189 6.5e-07 56.6 41 58.5
arahy.Tifrunner.gnm1.ann1.39XWEQ Arachis hypogaea HOM05D003914 ORTHO05D001189 8.5e-07 56.2 41 58.5
arahy.Tifrunner.gnm1.ann1.E1J0LN Arachis hypogaea HOM05D003914 ORTHO05D001189 8.5e-07 56.2 41 58.5
AUR62026733 Chenopodium quinoa HOM05D003914 ORTHO05D001189 8.5e-07 56.2 41 63.4
Ciclev10024784m.g Citrus clementina HOM05D003914 ORTHO05D001189 8.5e-07 56.2 41 58.5
Phvul.008G287100 Phaseolus vulgaris HOM05D003914 ORTHO05D001189 8.5e-07 56.2 41 56.1
Psat2g003960 Pisum sativum HOM05D003914 ORTHO05D001189 8.5e-07 56.2 41 56.1
QL05p034889 Quercus lobata HOM05D003914 ORTHO05D001189 1.1e-06 55.8 41 61.0
Ca_06471_v3 Cicer arietinum L. HOM05D003914 ORTHO05D001189 1.5e-06 55.5 41 56.1
Migut.I00709 Erythranthe guttata HOM05D003914 ORTHO05D001189 1.5e-06 55.5 37 67.6
AUR62013548 Chenopodium quinoa HOM05D003914 ORTHO05D001189 1.9e-06 55.1 41 61.0
Duzib235G0729 Durio zibethinus HOM05D003914 ORTHO05D001189 1.9e-06 55.1 41 61.0
SGA_v2.0_scaffold5G02755 Striga asiatica HOM05D003914 ORTHO05D001189 1.9e-06 55.1 33 75.8
Cpa.g.sc2.93 Carica papaya HOM05D003914 ORTHO05D001189 2.5e-06 54.7 37 70.3
HPP92_024673 Vanilla planifolia HOM05D003914 ORTHO05D001189 2.5e-06 54.7 37 64.9
CAN.G407.47 Capsicum annuum HOM05D003914 ORTHO05D001189 3.2e-06 54.3 40 60.0
Nitab4.5_0001454g0080 Nicotiana tabacum HOM05D003914 ORTHO05D001189 3.2e-06 54.3 40 60.0
Solyc03g117120.4 Solanum lycopersicum HOM05D003914 ORTHO05D001189 3.2e-06 54.3 40 60.0
Sopen03g036030 Solanum pennellii HOM05D003914 ORTHO05D001189 3.2e-06 54.3 40 60.0
vmacro19039 Vaccinium macrocarpon HOM05D003914 ORTHO05D001189 3.2e-06 54.3 41 61.0
VMungo0647G1679 Vigna mungo HOM05D003914 ORTHO05D001189 3.2e-06 54.3 41 53.7
Nitab4.5_0011117g0010 Nicotiana tabacum HOM05D003914 ORTHO05D001189 4.2e-06 53.9 40 60.0
Oeu008404.1 Olea europaea HOM05D003914 ORTHO05D001189 4.2e-06 53.9 40 60.0
Peaxi162Scf00332g00329 Petunia axillaris HOM05D003914 ORTHO05D001189 4.2e-06 53.9 39 61.5
Rhsim08G0208100 Rhododendron simsii HOM05D003914 ORTHO05D001189 4.2e-06 53.9 41 61.0
Ah.02g130190 Amaranthus hybridus HOM05D003914 ORTHO05D001189 5.5e-06 53.5 32 71.9
CiPaw.01G252800 Carya illinoinensis HOM05D003914 ORTHO05D001189 5.5e-06 53.5 41 56.1
DCAR_025582 Daucus carota HOM05D003914 ORTHO05D001189 7.2e-06 53.1 41 58.5
SalBow5G0986 Salvia bowleyana HOM05D003914 ORTHO05D001189 7.2e-06 53.1 37 67.6
SalBow5G5560 Salvia bowleyana HOM05D003914 ORTHO05D001189 7.2e-06 53.1 37 67.6
SalBow7G0967 Salvia bowleyana HOM05D003914 ORTHO05D001189 7.2e-06 53.1 37 67.6
TAR381G0623 Trochodendron aralioides HOM05D003914 ORTHO05D001189 7.2e-06 53.1 41 58.5
EL10Ac3g05211 Beta vulgaris HOM05D003914 ORTHO05D001189 9.5e-06 52.8 32 68.8


User provided reference genes

Program Settings