Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g03532 Nelumbo nucifera HOM05D006187 ORTHO05D007621 3.6e-120 434.9 209 100.0
COL.COLO4_09662 Corchorus olitorius HOM05D006187 ORTHO05D007621 2.8e-109 398.7 209 90.4
TAR626G1058 Trochodendron aralioides HOM05D006187 ORTHO05D007621 7.0e-108 394.0 209 89.5
Haze_09689 Corylus avellana HOM05D006187 ORTHO05D007621 9.1e-108 393.7 209 88.5
Sed0017183 Sechium edule HOM05D006187 ORTHO05D007621 1.5e-107 392.9 209 87.1
Thecc.07G036900 Theobroma cacao HOM05D006187 ORTHO05D007621 5.9e-107 391.0 209 87.6
CANSAT11G0252 Cannabis sativa HOM05D006187 ORTHO05D007621 7.7e-107 390.6 209 87.6
Cfa020345 Carpinus fangiana HOM05D006187 ORTHO05D007621 7.7e-107 390.6 209 87.6
RhsimUnG0250600 Rhododendron simsii HOM05D006187 ORTHO05D007621 7.7e-107 390.6 209 86.6
CiPaw.11G189300 Carya illinoinensis HOM05D006187 ORTHO05D007621 2.2e-106 389.0 209 90.0
DCAR_022562 Daucus carota HOM05D006187 ORTHO05D007621 6.5e-106 387.5 209 86.1
Gohir.D01G066500 Gossypium hirsutum HOM05D006187 ORTHO05D007621 6.5e-106 387.5 209 87.1
Prupe.4G212700 Prunus persica HOM05D006187 ORTHO05D007621 1.1e-105 386.7 209 87.1
PGR083G2749 Punica granatum HOM05D006187 ORTHO05D007621 1.4e-105 386.3 209 86.1
Dinv22262 Davidia involucrata HOM05D006187 ORTHO05D007621 4.2e-105 384.8 209 87.1
Manes.15G071900 Manihot esculenta HOM05D006187 ORTHO05D007621 4.2e-105 384.8 209 86.6
Ciclev10009486m.g Citrus clementina HOM05D006187 ORTHO05D007621 7.2e-105 384.0 209 85.6
Gorai.002G088500 Gossypium raimondii HOM05D006187 ORTHO05D007621 9.4e-105 383.6 209 86.1
CsaV3_7G021800 Cucumis sativus L. HOM05D006187 ORTHO05D007621 1.2e-104 383.3 209 86.1
Gohir.A01G079500 Gossypium hirsutum HOM05D006187 ORTHO05D007621 1.2e-104 383.3 209 86.1
CAN.G337.132 Capsicum annuum HOM05D006187 ORTHO05D007621 1.6e-104 382.9 209 86.1
ECA246G0646 Erigeron canadensis HOM05D006187 ORTHO05D007621 1.6e-104 382.9 209 86.6
Oeu005532.1 Olea europaea HOM05D006187 ORTHO05D007621 2.1e-104 382.5 209 86.1
THA.LOC104816937 Tarenaya hassleriana HOM05D006187 ORTHO05D007621 2.7e-104 382.1 209 86.6
Cc05_g13690 Coffea canephora HOM05D006187 ORTHO05D007621 3.6e-104 381.7 209 86.6
FvH4_3g22670 Fragaria vesca HOM05D006187 ORTHO05D007621 4.7e-104 381.3 209 87.1
VMungo0647G0583 Vigna mungo HOM05D006187 ORTHO05D007621 6.1e-104 380.9 209 85.2
MD11G1218600 Malus domestica HOM05D006187 ORTHO05D007621 8.0e-104 380.6 209 86.1
RcHm_v2.0_Chr5g0039431 Rosa chinensis HOM05D006187 ORTHO05D007621 1.0e-103 380.2 209 85.6
arahy.Tifrunner.gnm1.ann1.KHU2SV Arachis hypogaea HOM05D006187 ORTHO05D007621 1.4e-103 379.8 209 85.2
arahy.Tifrunner.gnm1.ann1.YIAG1Z Arachis hypogaea HOM05D006187 ORTHO05D007621 1.4e-103 379.8 209 85.2
Duzib170G0579 Durio zibethinus HOM05D006187 ORTHO05D007621 1.4e-103 379.8 209 85.2
Lalb_Chr10g0106971 Lupinus albus HOM05D006187 ORTHO05D007621 1.8e-103 379.4 209 85.2
Aqoxy1G03401 Aquilegia oxysepala HOM05D006187 ORTHO05D007621 3.9e-103 378.3 209 85.2
MSTRG.26280 Avicennia marina HOM05D006187 ORTHO05D007621 3.9e-103 378.3 209 84.2
Dinv40753 Davidia involucrata HOM05D006187 ORTHO05D007621 5.2e-103 377.9 209 86.1
Potri.001G435500 Populus trichocarpa HOM05D006187 ORTHO05D007621 5.2e-103 377.9 209 84.7
Potri.011G139500 Populus trichocarpa HOM05D006187 ORTHO05D007621 6.7e-103 377.5 209 85.6
PSO210G0259 Papaver somniferum HOM05D006187 ORTHO05D007621 8.8e-103 377.1 209 82.3
Phvul.008G266900 Phaseolus vulgaris HOM05D006187 ORTHO05D007621 1.1e-102 376.7 209 84.2
Eucgr.F00764 Eucalyptus grandis HOM05D006187 ORTHO05D007621 1.5e-102 376.3 209 85.2
Peaxi162Scf00964g00021 Petunia axillaris HOM05D006187 ORTHO05D007621 1.5e-102 376.3 209 84.2
GSVIVG01037647001 Vitis vinifera HOM05D006187 ORTHO05D007621 1.5e-102 376.3 209 85.6
CSS0042680 Camellia sinensis var. sinensis HOM05D006187 ORTHO05D007621 2.0e-102 375.9 209 84.2
LjContig00272g0005891 Lotus japonicus HOM05D006187 ORTHO05D007621 3.3e-102 375.2 209 83.3
PGSC0003DMG400022319 Solanum tuberosum HOM05D006187 ORTHO05D007621 5.7e-102 374.4 209 84.2
PSO832G1277 Papaver somniferum HOM05D006187 ORTHO05D007621 7.4e-102 374.0 209 81.3
Ah.06g186030 Amaranthus hybridus HOM05D006187 ORTHO05D007621 1.3e-101 373.2 209 81.3
AUR62020447 Chenopodium quinoa HOM05D006187 ORTHO05D007621 1.3e-101 373.2 209 83.3
Solyc07g064590.3 Solanum lycopersicum HOM05D006187 ORTHO05D007621 1.3e-101 373.2 209 84.2
Ca_06320_v3 Cicer arietinum L. HOM05D006187 ORTHO05D007621 1.7e-101 372.9 209 84.2
Ca_30809_v3 Cicer arietinum L. HOM05D006187 ORTHO05D007621 1.7e-101 372.9 209 84.2
CiPaw.12G129700 Carya illinoinensis HOM05D006187 ORTHO05D007621 4.8e-101 371.3 209 84.7
Migut.K00331 Erythranthe guttata HOM05D006187 ORTHO05D007621 4.8e-101 371.3 208 82.7
Sopen07g032780 Solanum pennellii HOM05D006187 ORTHO05D007621 4.8e-101 371.3 209 83.7
FAN16G3112 Fragaria x ananassa HOM05D006187 ORTHO05D007621 6.3e-101 370.9 221 82.4
TWI39G1048 Tripterygium wilfordii HOM05D006187 ORTHO05D007621 8.2e-101 370.5 209 81.3
unitig_746.g26546 Utricularia gibba HOM05D006187 ORTHO05D007621 1.1e-100 370.2 209 83.7
SalBow5G2755 Salvia bowleyana HOM05D006187 ORTHO05D007621 1.8e-100 369.4 225 79.1
TPR.G1184 Trifolium pratense HOM05D006187 ORTHO05D007621 1.8e-100 369.4 209 82.8
Psat2g010920 Pisum sativum HOM05D006187 ORTHO05D007621 2.4e-100 369.0 209 82.3
HPP92_016292 Vanilla planifolia HOM05D006187 ORTHO05D007621 3.1e-100 368.6 208 83.2
Aa31LG10G3660 Aethionema arabicum HOM05D006187 ORTHO05D007621 7.0e-100 367.5 209 83.7
AUR62015764 Chenopodium quinoa HOM05D006187 ORTHO05D007621 1.2e-99 366.7 209 81.3
A06p02950 Brassica napus HOM05D006187 ORTHO05D007621 1.6e-99 366.3 209 81.8
AT1G50670 Arabidopsis thaliana HOM05D006187 ORTHO05D007621 2.0e-99 365.9 209 82.8
CSS0049447 Camellia sinensis var. sinensis HOM05D006187 ORTHO05D007621 2.0e-99 365.9 209 82.8
C06p05930 Brassica napus HOM05D006187 ORTHO05D007621 3.5e-99 365.2 209 82.3
CARHR040720 Cardamine hirsuta HOM05D006187 ORTHO05D007621 3.5e-99 365.2 209 82.8
FAN11G0395 Fragaria x ananassa HOM05D006187 ORTHO05D007621 4.5e-99 364.8 230 79.1
BcaB07g33507 Brassica carinata HOM05D006187 ORTHO05D007621 5.9e-99 364.4 209 82.3
AL1G58340 Arabidopsis lyrata HOM05D006187 ORTHO05D007621 1.3e-98 363.2 209 81.8
FAN25G1478 Fragaria x ananassa HOM05D006187 ORTHO05D007621 1.7e-98 362.8 230 78.7
BcaC08g43245 Brassica carinata HOM05D006187 ORTHO05D007621 5.0e-98 361.3 209 81.8
SGA_v2.0_scaffold347G49550 Striga asiatica HOM05D006187 ORTHO05D007621 8.5e-98 360.5 209 81.8
BraA06t23501Z Brassica rapa HOM05D006187 ORTHO05D007621 1.1e-97 360.1 210 81.4
Carub.0001s3971 Capsella rubella HOM05D006187 ORTHO05D007621 1.1e-97 360.1 209 80.9
FAN21G2137 Fragaria x ananassa HOM05D006187 ORTHO05D007621 1.1e-97 360.1 240 75.8
EL10Ac4g07806 Beta vulgaris HOM05D006187 ORTHO05D007621 1.5e-97 359.8 209 81.3
Sp1g37520 Schrenkiella parvula HOM05D006187 ORTHO05D007621 1.9e-97 359.4 209 80.4
ATR0794G016 Amborella trichopoda HOM05D006187 ORTHO05D007621 2.5e-97 359.0 209 80.9
Thhalv10011780m.g Eutrema salsugineum HOM05D006187 ORTHO05D007621 2.5e-97 359.0 209 81.3
Zm00001eb207490 Zea mays HOM05D006187 ORTHO05D007621 5.5e-97 357.8 209 80.4
Oeu062696.2 Olea europaea HOM05D006187 ORTHO05D007621 2.7e-96 355.5 243 72.0
Sc16g0006050 Simmondsia chinensis HOM05D006187 ORTHO05D007621 1.0e-95 353.6 209 80.4
MELO3C013167.2 Cucumis melo HOM05D006187 ORTHO05D007621 5.2e-95 351.3 189 86.2
ClCG09G010800 Citrullus lanatus HOM05D006187 ORTHO05D007621 8.8e-95 350.5 209 80.4
Lsat_1_v5_gn_5_3960 Lactuca sativa HOM05D006187 ORTHO05D007621 4.4e-94 348.2 191 87.4
CDE05G0514 Ceratophyllum demersum HOM05D006187 ORTHO05D007621 1.3e-93 346.7 209 78.0
Actinidia35344 Actinidia chinensis HOM05D006187 ORTHO05D007621 2.2e-93 345.9 210 78.6
Lalb_Chr17g0348481 Lupinus albus HOM05D006187 ORTHO05D007621 2.2e-93 345.9 190 86.8
HanXRQChr05g0159371 Helianthus annuus HOM05D006187 ORTHO05D007621 2.4e-92 342.4 187 87.2
HanXRQChr08g0233871 Helianthus annuus HOM05D006187 ORTHO05D007621 5.3e-92 341.3 187 86.6
Glyma.02G291000 Glycine max HOM05D006187 ORTHO05D007621 1.2e-91 340.1 193 82.9
TWI38G1854 Tripterygium wilfordii HOM05D006187 ORTHO05D007621 4.5e-91 338.2 187 83.4
Medtr5g092720 Medicago truncatula HOM05D006187 ORTHO05D007621 1.3e-90 336.7 190 82.6
Glyma.14G023700 Glycine max HOM05D006187 ORTHO05D007621 2.9e-90 335.5 185 84.9
Sabra11G0125500 Salix brachista HOM05D006187 ORTHO05D007621 3.8e-90 335.1 288 61.5
Mapoly0105s0022 Marchantia polymorpha HOM05D006187 ORTHO05D007621 1.0e-87 327.0 209 72.7
SMO201G0052 Selaginella moellendorffii HOM05D006187 ORTHO05D007621 5.2e-87 324.7 208 70.2
Pp3c26_11120 Physcomitrium patens HOM05D006187 ORTHO05D007621 1.5e-86 323.2 206 73.3
SEGI_20110 Sequoiadendron giganteum HOM05D006187 ORTHO05D007621 2.6e-86 322.4 206 73.8
QL08p010320 Quercus lobata HOM05D006187 ORTHO05D007621 1.5e-81 306.6 197 75.6
Nitab4.5_0011129g0020 Nicotiana tabacum HOM05D006187 ORTHO05D007621 7.2e-81 304.3 209 72.2
vmacro09715 Vaccinium macrocarpon HOM05D006187 ORTHO05D007621 8.0e-80 300.8 165 84.8
AagrBONN_evm.TU.Sc2ySwM_344.4367 Anthoceros agrestis HOM05D004720 ORTHO05D007621 3.4e-78 295.4 205 66.3
Lj1A872G52 Lonicera japonica HOM05D006187 ORTHO05D007621 1.7e-74 283.1 151 88.1
BolC6t35706H Brassica oleracea HOM05D006187 ORTHO05D007621 1.9e-73 279.6 165 80.0
SHI26611 Sapria himalayana HOM05D006187 ORTHO05D007621 1.4e-68 263.5 179 71.5
Cre09.g409050 Chlamydomonas reinhardtii HOM05D006187 ORTHO05D007621 9.2e-68 260.8 204 62.7
Hma1.2p1_0673F.1_g201350 Hydrangea macrophylla HOM05D006187 ORTHO05D007621 2.3e-66 256.1 209 63.2
PSO675G5262 Papaver somniferum HOM05D006187 ORTHO05D007621 3.9e-66 255.4 210 58.6
MCO07G461 Micromonas commoda HOM05D006187 ORTHO05D007621 1.1e-63 247.3 208 58.2
CBR_g54108 Chara braunii HOM05D006187 ORTHO05D007621 1.1e-60 237.3 167 67.1
HPP92_016312 Vanilla planifolia HOM05D006187 ORTHO05D007621 1.7e-58 229.9 135 80.7
PRCOL_00006206 Prasinoderma coloniale HOM05D006187 ORTHO05D007621 4.0e-55 218.8 206 52.4
Cpa.g.sc97.3 Carica papaya HOM05D006187 ORTHO05D007621 2.3e-50 203.0 152 65.8
PSO541G4439 Papaver somniferum HOM05D006187 ORTHO05D007621 5.1e-50 201.8 205 49.8
Haze_26155 Corylus avellana HOM05D006187 ORTHO05D007621 2.8e-40 169.5 207 38.2
MBI18_g14476_MAGBIO Magnolia biondii HOM05D006187 ORTHO05D007621 1.1e-39 167.5 149 59.7
Prupe.4G233700 Prunus persica HOM05D006187 ORTHO05D007621 6.4e-37 158.3 127 64.6
Cre06.g274700 Chlamydomonas reinhardtii HOM05D006187 ORTHO05D007621 7.1e-36 154.8 136 52.9
Nitab4.5_0001913g0160 Nicotiana tabacum HOM05D006187 ORTHO05D007621 7.8e-35 151.4 84 82.1
Os02g0164800 Oryza sativa ssp. japonica HOM05D006187 ORTHO05D007621 8.7e-34 147.9 84 81.0
PSO675G9324 Papaver somniferum HOM05D006187 ORTHO05D007621 1.1e-33 147.5 135 52.6
Cfa025770 Carpinus fangiana HOM05D006187 ORTHO05D007621 4.5e-30 135.6 225 36.4
HPP92_016311 Vanilla planifolia HOM05D006187 ORTHO05D007621 1.7e-29 133.7 74 83.8
AUR62015776 Chenopodium quinoa HOM05D006187 ORTHO05D007621 7.1e-20 101.7 52 86.5
QL08p010315 Quercus lobata HOM05D006187 ORTHO05D007621 8.2e-16 88.2 43 88.4


User provided reference genes

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