Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g03098 Nelumbo nucifera HOM05D006778 ORTHO05D008341 8.1e-85 317.0 157 100.0
TAR362G0656 Trochodendron aralioides HOM05D006778 ORTHO05D008341 3.9e-47 191.8 145 69.7
Actinidia37573 Actinidia chinensis HOM05D006778 ORTHO05D008341 4.2e-41 171.8 149 59.7
CiPaw.03G152900 Carya illinoinensis HOM05D006778 ORTHO05D008341 4.7e-40 168.3 147 61.9
vmacro02733 Vaccinium macrocarpon HOM05D006778 ORTHO05D008341 4.4e-38 161.8 163 54.0
Manes.12G043800 Manihot esculenta HOM05D006778 ORTHO05D008341 6.3e-37 157.9 145 58.6
Lj3g0024250 Lotus japonicus HOM05D006778 ORTHO05D008341 4.1e-36 155.2 149 56.4
Rhsim13G0042100 Rhododendron simsii HOM05D006778 ORTHO05D008341 4.1e-36 155.2 152 54.6
Glyma.10G042900 Glycine max HOM05D006778 ORTHO05D008341 1.6e-35 153.3 147 56.5
QL07p037469 Quercus lobata HOM05D006778 ORTHO05D008341 2.0e-35 152.9 170 54.1
FAN15G2222 Fragaria x ananassa HOM05D006778 ORTHO05D008341 4.5e-35 151.8 147 56.5
Cc01_g17420 Coffea canephora HOM05D006778 ORTHO05D008341 1.0e-34 150.6 148 55.4
FvH4_2g19780 Fragaria vesca HOM05D006778 ORTHO05D008341 1.0e-34 150.6 160 54.4
Prupe.8G209000 Prunus persica HOM05D006778 ORTHO05D008341 1.0e-34 150.6 145 55.9
MD05G1182200 Malus domestica HOM05D006778 ORTHO05D008341 1.3e-34 150.2 152 56.6
Aqoxy2G03836 Aquilegia oxysepala HOM05D006778 ORTHO05D008341 2.2e-34 149.4 144 53.5
Cfa002523 Carpinus fangiana HOM05D006778 ORTHO05D008341 2.2e-34 149.4 146 58.9
CiPaw.04G108200 Carya illinoinensis HOM05D006778 ORTHO05D008341 2.9e-34 149.1 161 52.8
Lj5g0022938 Lotus japonicus HOM05D006778 ORTHO05D008341 2.9e-34 149.1 149 55.7
GSVIVG01028519001 Vitis vinifera HOM05D006778 ORTHO05D008341 3.8e-34 148.7 146 56.2
CAN.G941.43 Capsicum annuum HOM05D006778 ORTHO05D008341 1.1e-33 147.1 148 54.1
RcHm_v2.0_Chr6g0285481 Rosa chinensis HOM05D006778 ORTHO05D008341 1.9e-33 146.4 157 54.8
Solyc06g008020.3 Solanum lycopersicum HOM05D006778 ORTHO05D008341 2.5e-33 146.0 152 49.3
SGA_v2.0_scaffold8G04666 Striga asiatica HOM05D006778 ORTHO05D008341 1.2e-32 143.7 149 55.0
Glyma.13G130200 Glycine max HOM05D006778 ORTHO05D008341 6.1e-32 141.4 151 51.7
Psat6g064720 Pisum sativum HOM05D006778 ORTHO05D008341 1.0e-31 140.6 160 50.0
arahy.Tifrunner.gnm1.ann1.01AYHN Arachis hypogaea HOM05D006778 ORTHO05D008341 3.0e-31 139.0 145 53.1
ECA247G0226 Erigeron canadensis HOM05D000070 ORTHO05D003190 3.0e-31 139.0 144 51.4
CANSAT01G2408 Cannabis sativa HOM05D006778 ORTHO05D008341 4.0e-31 138.7 164 47.6
CANSAT01G3118 Cannabis sativa HOM05D006778 ORTHO05D008341 4.0e-31 138.7 164 47.6
Medtr1g069150 Medicago truncatula HOM05D006778 ORTHO05D008341 5.2e-31 138.3 161 49.7
Cpa.g.sc8.198 Carica papaya HOM05D006778 ORTHO05D008341 1.2e-30 137.1 145 53.8
Migut.D00505 Erythranthe guttata HOM05D006778 ORTHO05D008341 1.2e-30 137.1 145 49.7
ATR0787G018 Amborella trichopoda HOM05D006778 ORTHO05D008341 1.5e-30 136.7 151 50.3
arahy.Tifrunner.gnm1.ann1.PE83GC Arachis hypogaea HOM05D006778 ORTHO05D008341 1.5e-30 136.7 145 52.4
Phvul.007G156300 Phaseolus vulgaris HOM05D006778 ORTHO05D008341 1.5e-30 136.7 153 51.0
CDE06G1811 Ceratophyllum demersum HOM05D006778 ORTHO05D008341 4.4e-30 135.2 167 45.5
ClCG07G001620 Citrullus lanatus HOM05D006778 ORTHO05D008341 4.4e-30 135.2 151 51.0
Sopen06g002860 Solanum pennellii HOM05D006778 ORTHO05D008341 4.4e-30 135.2 152 46.7
HPP92_014070 Vanilla planifolia HOM05D006778 ORTHO05D008341 4.4e-30 135.2 152 49.3
Thecc.01G232400 Theobroma cacao HOM05D006778 ORTHO05D008341 7.5e-30 134.4 186 43.5
Nitab4.5_0003180g0010 Nicotiana tabacum HOM05D006778 ORTHO05D008341 1.7e-29 133.3 150 48.0
PGR044G1830 Punica granatum HOM05D006778 ORTHO05D008341 2.2e-29 132.9 150 50.0
THA.LOC104820057 Tarenaya hassleriana HOM05D006778 ORTHO05D008341 2.2e-29 132.9 147 51.7
CDE07G0370 Ceratophyllum demersum HOM05D006778 ORTHO05D008341 3.7e-29 132.1 149 48.3
FAN24G1005 Fragaria x ananassa HOM05D006778 ORTHO05D008341 3.7e-29 132.1 161 48.4
Nitab4.5_0001740g0070 Nicotiana tabacum HOM05D006778 ORTHO05D008341 3.7e-29 132.1 150 48.7
Potri.002G252700 Populus trichocarpa HOM05D006778 ORTHO05D008341 4.8e-29 131.7 141 51.8
Sed0012724 Sechium edule HOM05D006778 ORTHO05D008341 4.8e-29 131.7 145 50.3
Sabra02G0191900 Salix brachista HOM05D006778 ORTHO05D008341 6.3e-29 131.3 146 50.7
MELO3C026499.2 Cucumis melo HOM05D006778 ORTHO05D008341 8.2e-29 131.0 146 50.0
DCAR_012626 Daucus carota HOM05D006778 ORTHO05D008341 1.1e-28 130.6 156 49.4
CsaV3_6G036140 Cucumis sativus L. HOM05D006778 ORTHO05D008341 1.4e-28 130.2 146 49.3
TPR.G33801 Trifolium pratense HOM05D006778 ORTHO05D008341 5.3e-28 128.3 159 47.8
AUR62031811 Chenopodium quinoa HOM05D006778 ORTHO05D008341 9.1e-28 127.5 182 42.9
Lalb_Chr21g0314231 Lupinus albus HOM05D006778 ORTHO05D008341 1.6e-27 126.7 152 49.3
Dinv19236 Davidia involucrata HOM05D006778 ORTHO05D008341 3.5e-27 125.6 138 47.1
Pp3c19_5220 Physcomitrium patens HOM05D006778 ORTHO05D008341 2.2e-26 122.9 148 44.6
Thhalv10026155m.g Eutrema salsugineum HOM05D006778 ORTHO05D008341 2.9e-26 122.5 163 44.2
Gohir.D08G211201 Gossypium hirsutum HOM05D006778 ORTHO05D008341 8.5e-26 120.9 171 46.2
CARHR236610 Cardamine hirsuta HOM05D006778 ORTHO05D008341 1.1e-25 120.6 183 44.3
Duzib133G1327 Durio zibethinus HOM05D006778 ORTHO05D008341 1.5e-25 120.2 184 42.9
Gorai.004G223900 Gossypium raimondii HOM05D006778 ORTHO05D008341 1.5e-25 120.2 185 43.8
Mapoly0102s0014 Marchantia polymorpha HOM05D006778 ORTHO05D008341 1.5e-25 120.2 153 43.8
Carub.0007s1182 Capsella rubella HOM05D006778 ORTHO05D008341 1.9e-25 119.8 159 44.7
COL.COLO4_28579 Corchorus olitorius HOM05D006778 ORTHO05D008341 1.9e-25 119.8 172 43.6
AT4G28820 Arabidopsis thaliana HOM05D006778 ORTHO05D008341 2.5e-25 119.4 180 41.1
Gohir.A08G193200 Gossypium hirsutum HOM05D006778 ORTHO05D008341 1.6e-24 116.7 180 42.8
Haze_24755 Corylus avellana HOM05D006778 ORTHO05D008341 2.1e-24 116.3 94 63.8
Haze_24757 Corylus avellana HOM05D006778 ORTHO05D008341 2.1e-24 116.3 94 63.8
PGR044G0410 Punica granatum HOM05D006778 ORTHO05D008341 2.1e-24 116.3 144 45.8
Sp7g26820 Schrenkiella parvula HOM05D006778 ORTHO05D008341 2.7e-24 115.9 169 44.4
SMO111G0074 Selaginella moellendorffii HOM05D006778 ORTHO05D008341 4.7e-24 115.2 145 44.1
EL10Ac7g17819 Beta vulgaris HOM05D006778 ORTHO05D008341 1.0e-23 114.0 154 43.5
BcaC09g51658 Brassica carinata HOM05D006778 ORTHO05D008341 2.3e-23 112.8 166 43.4
BcaNung01362 Brassica carinata HOM05D006778 ORTHO05D008341 5.2e-23 111.7 166 43.4
CSS0042066 Camellia sinensis var. sinensis HOM05D006778 ORTHO05D008341 8.8e-23 110.9 158 44.3
Zm00001eb149030 Zea mays HOM05D006778 ORTHO05D008341 3.4e-22 109.0 149 42.3
CBR_g29688 Chara braunii HOM05D006778 ORTHO05D008341 6.3e-21 104.8 155 40.6
AL7G23670 Arabidopsis lyrata HOM05D006778 ORTHO05D008341 1.1e-20 104.0 189 38.6
TWI14G0487 Tripterygium wilfordii HOM05D006778 ORTHO05D008341 1.4e-20 103.6 197 35.0
C01p10640 Brassica napus HOM05D006778 ORTHO05D008341 2.7e-19 99.4 165 40.6
A01p09090 Brassica napus HOM05D006778 ORTHO05D008341 4.5e-19 98.6 163 40.5
PGSC0003DMG400014691 Solanum tuberosum HOM05D006778 ORTHO05D008341 4.5e-19 98.6 159 37.1
BolC1t01026H Brassica oleracea HOM05D006778 ORTHO05D008341 8.6e-18 94.4 163 39.3
AagrBONN_evm.TU.Sc2ySwM_228.3325 Anthoceros agrestis HOM05D006778 ORTHO05D008341 1.5e-17 93.6 152 38.8
BraA01t00857Z Brassica rapa HOM05D006778 ORTHO05D008341 4.2e-17 92.0 165 37.6
Actinidia30101 Actinidia chinensis HOM05D006778 ORTHO05D008341 9.5e-17 90.9 91 57.1
MSTRG.18371 Avicennia marina HOM05D006778 ORTHO05D008341 8.0e-16 87.8 145 36.6
PSO063G2427 Papaver somniferum HOM05D006778 ORTHO05D008341 8.0e-16 87.8 120 43.3
Atru.chr5.1931 Acer truncatum HOM05D006778 ORTHO05D008341 1.0e-15 87.4 115 48.7
PSO017G3634 Papaver somniferum HOM05D006778 ORTHO05D008341 3.0e-15 85.9 136 41.9
BolC7t46124H Brassica oleracea HOM05D006778 ORTHO05D008341 5.2e-15 85.1 204 32.4
Hma1.2p1_1858F.1_g305520 Hydrangea macrophylla HOM05D006778 ORTHO05D008341 6.8e-15 84.7 68 64.7
MBI11_g20194_MAGBIO Magnolia biondii HOM05D006778 ORTHO05D008341 6.8e-15 84.7 59 76.3
C07p56450 Brassica napus HOM05D006778 ORTHO05D008341 2.6e-14 82.8 204 32.4
AUR62008897 Chenopodium quinoa HOM05D006778 ORTHO05D008341 3.4e-14 82.4 157 37.6
MD10G1170500 Malus domestica HOM05D006778 ORTHO05D008341 7.5e-14 81.3 150 36.7
A03p58430 Brassica napus HOM05D006778 ORTHO05D008341 2.2e-13 79.7 194 34.0
SalBow4G2567 Salvia bowleyana HOM05D006778 ORTHO05D008341 3.7e-13 79.0 94 48.9
MCO09G744 Micromonas commoda HOM05D004020 ORTHO05D004735 3.1e-12 75.9 139 36.0
AagrBONN_evm.TU.Sc2ySwM_368.1574 Anthoceros agrestis HOM05D006778 ORTHO05D008341 4.1e-12 75.5 121 40.5
Hund05528 Selenicereus undatus HOM05D006778 ORTHO05D008341 4.1e-12 75.5 121 44.6
Aa31LG2G21570 Aethionema arabicum HOM05D006778 ORTHO05D008341 2.0e-11 73.2 155 34.2
Ca_09622_v3 Cicer arietinum L. HOM05D006778 ORTHO05D008341 2.7e-11 72.8 78 53.8
SEGI_27672 Sequoiadendron giganteum HOM05D006778 ORTHO05D008341 2.7e-11 72.8 57 64.9
Peaxi162Scf00499g00413 Petunia axillaris HOM05D006778 ORTHO05D008341 2.3e-10 69.7 126 37.3
Lsat_1_v5_gn_9_11140 Lactuca sativa HOM05D006778 ORTHO05D008341 2.9e-10 69.3 110 44.5
VMungo0720G2677 Vigna mungo HOM05D006778 ORTHO05D008341 1.1e-09 67.4 140 37.9
Sc17g0002480 Simmondsia chinensis HOM05D006778 ORTHO05D008341 3.6e-08 62.4 110 40.9
Sed0026958 Sechium edule HOM05D006778 ORTHO05D008341 1.2e-06 57.4 77 45.5
Gohir.D08G007200 Gossypium hirsutum HOM05D006778 ORTHO05D008341 7.5e-06 54.7 94 42.6


User provided reference genes

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