Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g03061 Nelumbo nucifera HOM05D006620 ORTHO05D008921 3.5e-261 904.4 463 100.0
TAR365G0583 Trochodendron aralioides HOM05D006620 ORTHO05D008921 1.6e-237 825.9 464 87.7
Cpa.g.sc59.55 Carica papaya HOM05D006620 ORTHO05D008921 1.2e-232 809.7 464 84.5
Ciclev10004924m.g Citrus clementina HOM05D006620 ORTHO05D008921 1.3e-231 806.2 461 85.0
GSVIVG01028992001 Vitis vinifera HOM05D006620 ORTHO05D008921 2.2e-231 805.4 428 89.3
CiPaw.02G103900 Carya illinoinensis HOM05D006620 ORTHO05D008921 2.9e-231 805.1 464 83.6
Duzib151G1212 Durio zibethinus HOM05D006620 ORTHO05D008921 4.9e-231 804.3 454 84.6
Lalb_Chr01g0011271 Lupinus albus HOM05D006620 ORTHO05D008921 3.2e-230 801.6 464 83.6
Dinv29777 Davidia involucrata HOM05D006620 ORTHO05D008921 4.2e-230 801.2 464 86.9
Manes.15G048100 Manihot esculenta HOM05D006620 ORTHO05D008921 5.5e-230 800.8 464 84.3
Atru.chr4.1848 Acer truncatum HOM05D006620 ORTHO05D008921 9.3e-230 800.0 428 88.1
Gohir.A10G119800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 1.6e-229 799.3 427 87.8
Actinidia25091 Actinidia chinensis HOM05D006620 ORTHO05D008921 2.1e-229 798.9 464 83.6
Oeu024839.2 Olea europaea HOM05D006620 ORTHO05D008921 2.1e-229 798.9 464 83.0
VMungo0720G1672 Vigna mungo HOM05D006620 ORTHO05D008921 2.1e-229 798.9 459 83.2
Gohir.D10G146800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 6.0e-229 797.3 426 87.8
SalBow2G2385 Salvia bowleyana HOM05D006620 ORTHO05D008921 6.0e-229 797.3 466 82.8
Thecc.04G218300 Theobroma cacao HOM05D006620 ORTHO05D008921 1.3e-228 796.2 428 88.3
TWI53G1958 Tripterygium wilfordii HOM05D006620 ORTHO05D008921 2.3e-228 795.4 457 84.5
QL06p022330 Quercus lobata HOM05D006620 ORTHO05D008921 3.0e-228 795.0 470 82.3
CSS0026751 Camellia sinensis var. sinensis HOM05D006620 ORTHO05D008921 3.9e-228 794.7 464 85.8
Lj6g0024353 Lotus japonicus HOM05D006620 ORTHO05D008921 3.9e-228 794.7 465 82.8
PGR142G1067 Punica granatum HOM05D006620 ORTHO05D008921 6.7e-228 793.9 428 87.9
Glyma.10G128400 Glycine max HOM05D006620 ORTHO05D008921 1.5e-227 792.7 462 82.3
SGA_v2.0_scaffold57G20185 Striga asiatica HOM05D006620 ORTHO05D008921 1.5e-227 792.7 428 86.9
Phvul.007G238800 Phaseolus vulgaris HOM05D006620 ORTHO05D008921 1.9e-227 792.3 424 87.7
arahy.Tifrunner.gnm1.ann1.8GH2US Arachis hypogaea HOM05D006620 ORTHO05D008921 5.7e-227 790.8 427 88.1
Cc03_g07000 Coffea canephora HOM05D006620 ORTHO05D008921 1.3e-226 789.6 455 83.3
THA.LOC104801056 Tarenaya hassleriana HOM05D006620 ORTHO05D008921 1.6e-226 789.3 464 81.7
Lsat_1_v5_gn_6_61660 Lactuca sativa HOM05D006620 ORTHO05D008921 4.8e-226 787.7 428 86.9
PSO764G0126 Papaver somniferum HOM05D006620 ORTHO05D008921 4.8e-226 787.7 427 87.4
Sopen09g034080 Solanum pennellii HOM05D006620 ORTHO05D008921 4.8e-226 787.7 464 81.5
Aqoxy5G00083 Aquilegia oxysepala HOM05D006620 ORTHO05D008921 1.1e-225 786.6 424 86.8
CAN.G812.44 Capsicum annuum HOM05D006620 ORTHO05D008921 1.4e-225 786.2 428 86.2
Medtr1g046250 Medicago truncatula HOM05D006620 ORTHO05D008921 1.8e-225 785.8 460 81.3
ClCG05G003790 Citrullus lanatus HOM05D006620 ORTHO05D008921 3.1e-225 785.0 458 82.3
Migut.G00599 Erythranthe guttata HOM05D006620 ORTHO05D008921 6.9e-225 783.9 430 86.5
DCAR_002286 Daucus carota HOM05D006620 ORTHO05D008921 9.0e-225 783.5 491 78.6
Potri.010G062300 Populus trichocarpa HOM05D006620 ORTHO05D008921 9.0e-225 783.5 424 87.0
Hma1.2p1_1241F.1_g269780 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 1.2e-224 783.1 427 87.1
CANSAT78G1778 Cannabis sativa HOM05D006620 ORTHO05D008921 1.5e-224 782.7 462 81.2
CsaV3_3G011480 Cucumis sativus L. HOM05D006620 ORTHO05D008921 3.4e-224 781.6 458 81.9
MELO3C006358.2 Cucumis melo HOM05D006620 ORTHO05D008921 4.5e-224 781.2 458 82.3
arahy.Tifrunner.gnm1.ann1.68MQ8I Arachis hypogaea HOM05D006620 ORTHO05D008921 5.8e-224 780.8 482 79.9
TPR.G24008 Trifolium pratense HOM05D006620 ORTHO05D008921 1.0e-223 780.0 463 80.6
Thhalv10007576m.g Eutrema salsugineum HOM05D006620 ORTHO05D008921 3.8e-223 778.1 464 80.2
Prupe.1G054600 Prunus persica HOM05D006620 ORTHO05D008921 8.4e-223 776.9 428 86.4
RcHm_v2.0_Chr4g0396281 Rosa chinensis HOM05D006620 ORTHO05D008921 1.1e-222 776.5 460 82.8
Sed0017900 Sechium edule HOM05D006620 ORTHO05D008921 1.4e-222 776.2 424 85.8
AT1G04620 Arabidopsis thaliana HOM05D006620 ORTHO05D008921 3.2e-222 775.0 459 80.2
PSO832G4215 Papaver somniferum HOM05D006620 ORTHO05D008921 3.2e-222 775.0 431 85.6
AL1G14300 Arabidopsis lyrata HOM05D006620 ORTHO05D008921 7.1e-222 773.9 464 79.5
HanXRQChr07g0185841 Helianthus annuus HOM05D006620 ORTHO05D008921 7.1e-222 773.9 425 85.2
Sp1g03450 Schrenkiella parvula HOM05D006620 ORTHO05D008921 7.1e-222 773.9 464 79.7
SpUn0217_0010 Schrenkiella parvula HOM05D006620 ORTHO05D008921 7.1e-222 773.9 427 84.8
Carub.0001s0385 Capsella rubella HOM05D006620 ORTHO05D008921 9.3e-222 773.5 464 79.1
MD13G1227100 Malus domestica HOM05D006620 ORTHO05D008921 2.1e-221 772.3 463 81.0
C05p02810 Brassica napus HOM05D006620 ORTHO05D008921 4.6e-221 771.2 427 84.3
BolC5t29064H Brassica oleracea HOM05D006620 ORTHO05D008921 4.6e-221 771.2 465 79.4
CARHR003970 Cardamine hirsuta HOM05D006620 ORTHO05D008921 4.6e-221 771.2 465 80.0
Gorai.011G164100 Gossypium raimondii HOM05D006620 ORTHO05D008921 4.6e-221 771.2 426 85.4
FAN17G2880 Fragaria x ananassa HOM05D006620 ORTHO05D008921 7.9e-221 770.4 465 81.5
ECA233G0386 Erigeron canadensis HOM05D006620 ORTHO05D008921 1.3e-220 769.6 415 87.0
FvH4_4g05310 Fragaria vesca HOM05D006620 ORTHO05D008921 1.3e-220 769.6 465 83.4
A10p03050 Brassica napus HOM05D006620 ORTHO05D008921 2.3e-220 768.8 427 84.3
CDE09G0604 Ceratophyllum demersum HOM05D006620 ORTHO05D008921 2.3e-220 768.8 417 86.1
BraA10t42578Z Brassica rapa HOM05D006620 ORTHO05D008921 5.1e-220 767.7 464 78.9
unitig_899.g14858 Utricularia gibba HOM05D006620 ORTHO05D008921 5.1e-220 767.7 486 78.0
FAN12G0711 Fragaria x ananassa HOM05D006620 ORTHO05D008921 1.1e-219 766.5 466 81.1
ATR0787G041 Amborella trichopoda HOM05D006620 ORTHO05D008921 6.3e-218 760.8 423 84.2
FAN07G1877 Fragaria x ananassa HOM05D006620 ORTHO05D008921 8.2e-218 760.4 427 84.8
HPP92_009009 Vanilla planifolia HOM05D006620 ORTHO05D008921 5.0e-215 751.1 423 83.5
Zm00001eb038650 Zea mays HOM05D006620 ORTHO05D008921 1.9e-214 749.2 423 82.5
AUR62043860 Chenopodium quinoa HOM05D006620 ORTHO05D008921 5.5e-214 747.7 425 82.6
COL.COLO4_34324 Corchorus olitorius HOM05D006620 ORTHO05D008921 3.6e-213 745.0 480 79.8
Lj3A630T51 Lonicera japonica HOM05D006620 ORTHO05D008921 3.9e-212 741.5 428 83.2
SEGI_36405 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 4.3e-211 738.0 426 81.2
MBI07_g21064_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D008921 1.8e-209 732.6 401 86.8
Hund19263 Selenicereus undatus HOM05D006620 ORTHO05D008921 1.5e-208 729.6 423 83.2
Peaxi162Scf00125g00710 Petunia axillaris HOM05D006620 ORTHO05D008921 2.9e-207 725.3 401 86.3
vmacro00524 Vaccinium macrocarpon HOM05D006620 ORTHO05D008921 8.5e-207 723.8 490 74.5
Ah.04g153440 Amaranthus hybridus HOM05D006620 ORTHO05D008921 2.5e-206 722.2 425 81.2
AagrBONN_evm.TU.Sc2ySwM_228.367 Anthoceros agrestis HOM05D006620 ORTHO05D008921 2.1e-205 719.2 427 78.9
Rhsim09G0044600 Rhododendron simsii HOM05D006620 ORTHO05D008921 6.3e-202 707.6 445 79.1
Mapoly0088s0008 Marchantia polymorpha HOM05D006620 ORTHO05D008921 1.4e-201 706.4 425 76.5
Pp3c2_21860 Physcomitrium patens HOM05D006620 ORTHO05D008921 1.4e-201 706.4 418 78.0
AUR62035902 Chenopodium quinoa HOM05D006620 ORTHO05D008921 4.1e-201 704.9 426 78.9
FAN22G0814 Fragaria x ananassa HOM05D006620 ORTHO05D008921 7.7e-200 700.7 476 73.1
Solyc09g091100.4 Solanum lycopersicum HOM05D006620 ORTHO05D008921 2.6e-195 685.6 382 85.6
Nitab4.5_0003287g0030 Nicotiana tabacum HOM05D006620 ORTHO05D008921 3.7e-194 681.8 494 70.2
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 5.3e-193 677.9 523 66.9
Cfa014839 Carpinus fangiana HOM05D006620 ORTHO05D008921 1.6e-192 676.4 403 82.4
Sc25g0004890 Simmondsia chinensis HOM05D006620 ORTHO05D008921 1.1e-190 670.2 365 86.6
Aa31LG1G20250 Aethionema arabicum HOM05D006620 ORTHO05D008921 2.3e-188 662.5 387 81.9
EL10Ac3g06742 Beta vulgaris HOM05D006620 ORTHO05D008921 4.0e-188 661.8 427 75.9
CBR_g51515 Chara braunii HOM05D006620 ORTHO05D008921 1.9e-182 642.9 421 71.5
Glyma.20G079901 Glycine max HOM05D006620 ORTHO05D008921 1.8e-180 636.3 357 84.9
AUR62035337 Chenopodium quinoa HOM05D006620 ORTHO05D008921 4.9e-178 628.2 400 76.2
MCO15G577 Micromonas commoda HOM05D006620 ORTHO05D008921 2.3e-172 609.4 420 66.9
Cre11.g468700 Chlamydomonas reinhardtii HOM05D006620 ORTHO05D008921 4.1e-169 598.6 425 66.1
Ca_11784_v3 Cicer arietinum L. HOM05D006620 ORTHO05D008921 1.0e-167 594.0 376 76.9
Cc03_g06790 Coffea canephora HOM05D006620 ORTHO05D008921 1.5e-158 563.5 489 62.6
Os04g0320100 Oryza sativa ssp. japonica HOM05D006620 ORTHO05D008921 1.2e-141 507.3 272 87.9
Psat6g109520 Pisum sativum HOM05D006620 ORTHO05D008921 8.9e-140 501.1 311 79.1
PRCOL_00000047 Prasinoderma coloniale HOM05D006620 ORTHO05D008921 4.4e-139 498.8 373 63.5
Haze_11525 Corylus avellana HOM05D006620 ORTHO05D008921 4.2e-137 492.3 265 86.4
Nitab4.5_0000451g0130 Nicotiana tabacum HOM05D006620 ORTHO05D008921 3.3e-134 482.6 464 56.0
Eucgr.H00112 Eucalyptus grandis HOM05D006620 ORTHO05D008921 4.2e-113 412.5 224 86.6
PGSC0003DMG401011586 Solanum tuberosum HOM05D006620 ORTHO05D008921 1.1e-65 255.0 147 80.3
Prupe.1G054400 Prunus persica HOM05D006620 ORTHO05D008921 2.3e-63 247.3 190 67.9
SEGI_09547 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 1.7e-61 241.1 147 77.6
Hma1.2p1_1241F.1_g269765 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 9.5e-41 172.2 91 84.6
SEGI_19589 Sequoiadendron giganteum HOM05D006620 ORTHO05D025789 5.1e-26 123.2 79 70.9
Actinidia35928 Actinidia chinensis HOM05D006620 ORTHO05D000073 3.3e-25 120.6 70 84.3
Ca_17765_v3 Cicer arietinum L. HOM05D006620 ORTHO05D044367 3.9e-18 97.1 57 77.2
COL.COLO4_07239 Corchorus olitorius HOM05D006620 ORTHO05D044367 9.6e-17 92.4 49 87.8
MBI15_g44046_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 6.0e-11 73.2 46 76.1
MBI11_g39495_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 3.0e-10 70.9 43 76.7
MBI12_g00604_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 5.1e-10 70.1 42 76.2
MELO3C028457.2 Cucumis melo HOM05D006620 ORTHO05D167913 3.1e-07 60.8 40 77.5


User provided reference genes

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