Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g02542 Nelumbo nucifera HOM05D001788 ORTHO05D006995 1.1e-42 177.2 174 100.0
Nn5g29533 Nelumbo nucifera HOM05D001788 ORTHO05D006995 9.8e-15 84.3 63 73.0
CANSAT01G3243 Cannabis sativa HOM05D001788 ORTHO05D006995 2.9e-14 82.8 72 65.3
Peaxi162Scf00427g00512 Petunia axillaris HOM05D001788 ORTHO05D006995 1.4e-13 80.5 63 63.5
TAR381G1082 Trochodendron aralioides HOM05D001788 ORTHO05D006995 1.8e-13 80.1 72 61.1
Aqoxy5G01682 Aquilegia oxysepala HOM05D001788 ORTHO05D006995 3.2e-13 79.3 62 67.7
Haze_15119 Corylus avellana HOM05D001788 ORTHO05D006995 3.2e-13 79.3 84 57.1
Hma1.2p1_1228F.1_g268600 Hydrangea macrophylla HOM05D001788 ORTHO05D006995 5.4e-13 78.6 80 56.2
SGA_v2.0_scaffold33G13385 Striga asiatica HOM05D001788 ORTHO05D006995 5.4e-13 78.6 73 60.3
CAN.G358.123 Capsicum annuum HOM05D001788 ORTHO05D006995 1.2e-12 77.4 65 58.5
Actinidia19166 Actinidia chinensis HOM05D001788 ORTHO05D006995 1.6e-12 77.0 63 61.9
Cpa.g.sc158.3 Carica papaya HOM05D001788 ORTHO05D006995 2.7e-12 76.3 72 58.3
Hma1.2p1_0905F.1_g235320 Hydrangea macrophylla HOM05D001788 ORTHO05D006995 2.7e-12 76.3 76 59.2
Medtr5g019780 Medicago truncatula HOM05D001788 ORTHO05D006995 2.7e-12 76.3 62 64.5
Nitab4.5_0001279g0150 Nicotiana tabacum HOM05D001788 ORTHO05D006995 2.7e-12 76.3 65 56.9
CiPaw.01G034800 Carya illinoinensis HOM05D001788 ORTHO05D006995 4.6e-12 75.5 74 59.5
Duzib187G1910 Durio zibethinus HOM05D001788 ORTHO05D006995 4.6e-12 75.5 73 63.0
Nitab4.5_0002128g0030 Nicotiana tabacum HOM05D001788 ORTHO05D006995 6.0e-12 75.1 65 55.4
SHI08678 Sapria himalayana HOM05D001788 ORTHO05D006995 6.0e-12 75.1 72 55.6
CSS0019731 Camellia sinensis var. sinensis HOM05D001788 ORTHO05D006995 7.8e-12 74.7 63 61.9
Lj2g0000276 Lotus japonicus HOM05D001788 ORTHO05D006995 7.8e-12 74.7 63 65.1
MD02G1152000 Malus domestica HOM05D001788 ORTHO05D006995 7.8e-12 74.7 78 59.0
Prupe.7G151000 Prunus persica HOM05D001788 ORTHO05D006995 7.8e-12 74.7 74 55.4
Ca_00392_v3 Cicer arietinum L. HOM05D001788 ORTHO05D006995 1.0e-11 74.3 63 65.1
Manes.13G137200 Manihot esculenta HOM05D001788 ORTHO05D006995 1.0e-11 74.3 63 61.9
THA.LOC104807543 Tarenaya hassleriana HOM05D001788 ORTHO05D006995 1.0e-11 74.3 83 51.8
Glyma.11G065800 Glycine max HOM05D001788 ORTHO05D006995 1.3e-11 73.9 61 65.6
Gohir.A11G186000 Gossypium hirsutum HOM05D001788 ORTHO05D006995 1.3e-11 73.9 78 57.7
PGR102G3185 Punica granatum HOM05D001788 ORTHO05D006995 1.3e-11 73.9 74 54.1
Potri.007G029100 Populus trichocarpa HOM05D001788 ORTHO05D006995 1.7e-11 73.6 74 55.4
vmacro17861 Vaccinium macrocarpon HOM05D001788 ORTHO05D006995 1.7e-11 73.6 70 55.7
FAN23G0891 Fragaria x ananassa HOM05D001788 ORTHO05D006995 2.3e-11 73.2 76 55.3
Atru.chr3.537 Acer truncatum HOM05D001788 ORTHO05D006995 3.0e-11 72.8 72 56.9
FAN28G0335 Fragaria x ananassa HOM05D001788 ORTHO05D006995 3.9e-11 72.4 76 56.6
Gorai.007G205600 Gossypium raimondii HOM05D001788 ORTHO05D006995 3.9e-11 72.4 64 62.5
Manes.12G089864 Manihot esculenta HOM05D001788 ORTHO05D006995 3.9e-11 72.4 73 57.5
FvH4_1g13730 Fragaria vesca HOM05D001788 ORTHO05D006995 5.0e-11 72.0 76 55.3
FAN26G2185 Fragaria x ananassa HOM05D001788 ORTHO05D006995 5.0e-11 72.0 76 55.3
RcHm_v2.0_Chr2g0102141 Rosa chinensis HOM05D001788 ORTHO05D006995 5.0e-11 72.0 75 53.3
Solyc02g085590.4 Solanum lycopersicum HOM05D001788 ORTHO05D006995 5.0e-11 72.0 63 57.1
Migut.H00185 Erythranthe guttata HOM05D001788 ORTHO05D006995 6.6e-11 71.6 65 52.3
AUR62003182 Chenopodium quinoa HOM05D001788 ORTHO05D006995 8.6e-11 71.2 74 52.7
FAN19G0942 Fragaria x ananassa HOM05D001788 ORTHO05D006995 8.6e-11 71.2 74 55.4
Gohir.D11G192600 Gossypium hirsutum HOM05D001788 ORTHO05D006995 8.6e-11 71.2 75 58.7
Glyma.01G177000 Glycine max HOM05D001788 ORTHO05D006995 1.1e-10 70.9 61 63.9
PSO170G3836 Papaver somniferum HOM05D001788 ORTHO05D006995 1.1e-10 70.9 68 55.9
PGSC0003DMG400012661 Solanum tuberosum HOM05D001788 ORTHO05D006995 1.1e-10 70.9 63 55.6
TWI53G1751 Tripterygium wilfordii HOM05D001788 ORTHO05D006995 1.1e-10 70.9 76 56.6
Psat2g161120 Pisum sativum HOM05D001788 ORTHO05D006995 1.5e-10 70.5 63 61.9
Carub.0007s0362 Capsella rubella HOM05D001788 ORTHO05D006995 2.5e-10 69.7 72 55.6
TPR.G18814 Trifolium pratense HOM05D001788 ORTHO05D006995 2.5e-10 69.7 61 59.0
Lsat_1_v5_gn_2_77901 Lactuca sativa HOM05D001788 ORTHO05D006995 3.3e-10 69.3 61 59.0
Phvul.002G027900 Phaseolus vulgaris HOM05D001788 ORTHO05D006995 3.3e-10 69.3 61 63.9
Sopen02g030260 Solanum pennellii HOM05D001788 ORTHO05D006995 4.3e-10 68.9 61 55.7
AT2G18540 Arabidopsis thaliana HOM05D001788 ORTHO05D006995 5.6e-10 68.6 78 53.8
Lalb_Chr09g0322571 Lupinus albus HOM05D001788 ORTHO05D006995 5.6e-10 68.6 61 60.7
THA.LOC104819798 Tarenaya hassleriana HOM05D001788 ORTHO05D006995 5.6e-10 68.6 74 50.0
Thecc.01G039500 Theobroma cacao HOM05D001788 ORTHO05D006995 9.5e-10 67.8 74 54.1
GSVIVG01019005001 Vitis vinifera HOM05D001788 ORTHO05D006995 9.5e-10 67.8 57 59.6
HanXRQChr03g0071451 Helianthus annuus HOM05D001788 ORTHO05D006995 1.2e-09 67.4 63 52.4
Rhsim08G0112800 Rhododendron simsii HOM05D001788 ORTHO05D006995 1.2e-09 67.4 58 56.9
CARHR109140 Cardamine hirsuta HOM05D001788 ORTHO05D006995 1.6e-09 67.0 78 51.3
Lsat_1_v5_gn_2_76801 Lactuca sativa HOM05D001788 ORTHO05D006995 2.8e-09 66.2 63 52.4
Sp3g31990 Schrenkiella parvula HOM05D001788 ORTHO05D006995 2.8e-09 66.2 84 47.6
AT4G36700 Arabidopsis thaliana HOM05D001788 ORTHO05D006995 3.6e-09 65.9 72 52.8
Sabra05G0103400 Salix brachista HOM05D001788 ORTHO05D006995 3.6e-09 65.9 58 56.9
EL10Ac6g14913 Beta vulgaris HOM05D001788 ORTHO05D006995 4.7e-09 65.5 74 51.4
Lsat_1_v5_gn_3_78340 Lactuca sativa HOM05D001788 ORTHO05D006995 4.7e-09 65.5 63 50.8
ClCG01G019390 Citrullus lanatus HOM05D001788 ORTHO05D006995 6.2e-09 65.1 79 46.8
AL7G14310 Arabidopsis lyrata HOM05D001788 ORTHO05D006995 8.0e-09 64.7 72 50.0
Cfa004281 Carpinus fangiana HOM05D001788 ORTHO05D006995 8.0e-09 64.7 56 55.4
BcaB08g34828 Brassica carinata HOM05D001788 ORTHO05D006995 1.4e-08 63.9 72 48.6
A06p33160 Brassica napus HOM05D001788 ORTHO05D006995 1.4e-08 63.9 72 47.2
BraA06t26247Z Brassica rapa HOM05D001788 ORTHO05D006995 1.4e-08 63.9 72 47.2
AL3G51880 Arabidopsis lyrata HOM05D001788 ORTHO05D006995 1.8e-08 63.5 78 50.0
Sc16g0000950 Simmondsia chinensis HOM05D001788 ORTHO05D006995 1.8e-08 63.5 63 52.4
Carub.0003s3273 Capsella rubella HOM05D001788 ORTHO05D006995 2.3e-08 63.2 78 52.6
QL06p045400 Quercus lobata HOM05D001788 ORTHO05D006995 2.3e-08 63.2 71 53.5
SalBow5G5464 Salvia bowleyana HOM05D001788 ORTHO05D006995 2.3e-08 63.2 65 50.8
Dinv26811 Davidia involucrata HOM05D001788 ORTHO05D006995 3.1e-08 62.8 46 63.0
Sp7g34360 Schrenkiella parvula HOM05D001788 ORTHO05D006995 3.1e-08 62.8 76 50.0
CsaV3_6G046100 Cucumis sativus L. HOM05D001788 ORTHO05D006995 4.0e-08 62.4 66 48.5
ECA246G3405 Erigeron canadensis HOM05D001788 ORTHO05D006995 5.2e-08 62.0 61 47.5
Sed0004107 Sechium edule HOM05D001788 ORTHO05D006995 5.2e-08 62.0 62 50.0
Aa31LG6G13510 Aethionema arabicum HOM05D001788 ORTHO05D006995 6.8e-08 61.6 72 48.6
CARHR245050 Cardamine hirsuta HOM05D001788 ORTHO05D006995 8.9e-08 61.2 79 45.6
ATR0733G179 Amborella trichopoda HOM05D001788 ORTHO05D006995 1.2e-07 60.8 46 60.9
MELO3C007813.2 Cucumis melo HOM05D001788 ORTHO05D006995 1.2e-07 60.8 66 47.0
BcaC01g02859 Brassica carinata HOM05D001788 ORTHO05D006995 1.5e-07 60.5 72 45.8
BcaNung07141 Brassica carinata HOM05D001788 ORTHO05D006995 1.5e-07 60.5 76 44.7
C03p59290 Brassica napus HOM05D001788 ORTHO05D006995 1.5e-07 60.5 72 45.8
BolC3t18190H Brassica oleracea HOM05D001788 ORTHO05D006995 1.5e-07 60.5 72 45.8
HanXRQChr07g0190491 Helianthus annuus HOM05D001788 ORTHO05D006995 1.5e-07 60.5 62 51.6
Aa31LG8G15510 Aethionema arabicum HOM05D001788 ORTHO05D006995 2.0e-07 60.1 75 44.0
MBI16_g37295_MAGBIO Magnolia biondii HOM05D001788 ORTHO05D006995 2.6e-07 59.7 61 49.2
BcaC01g00447 Brassica carinata HOM05D001788 ORTHO05D006995 3.4e-07 59.3 66 48.5
C03p79950 Brassica napus HOM05D001788 ORTHO05D006995 3.4e-07 59.3 66 48.5
BolC3t20247H Brassica oleracea HOM05D001788 ORTHO05D006995 3.4e-07 59.3 66 48.5
DCAR_021445 Daucus carota HOM05D001788 ORTHO05D006995 3.4e-07 59.3 72 45.8
HanXRQChr06g0170171 Helianthus annuus HOM05D001788 ORTHO05D006995 3.4e-07 59.3 73 47.9
MD15G1266400 Malus domestica HOM05D001788 ORTHO05D006995 3.4e-07 59.3 46 63.0
BcaB03g12375 Brassica carinata HOM05D001788 ORTHO05D006995 4.4e-07 58.9 72 45.8
BraA08t34192Z Brassica rapa HOM05D001788 ORTHO05D006995 7.5e-07 58.2 72 44.4
BcaNung06145 Brassica carinata HOM05D001788 ORTHO05D006995 1.3e-06 57.4 76 43.4
A08p22360 Brassica napus HOM05D001788 ORTHO05D006995 1.3e-06 57.4 72 44.4
BolC7t46609H Brassica oleracea HOM05D001788 ORTHO05D006995 1.3e-06 57.4 76 43.4
BraA03t15508Z Brassica rapa HOM05D001788 ORTHO05D006995 1.3e-06 57.4 76 43.4
A03p64410 Brassica napus HOM05D001788 ORTHO05D006995 2.2e-06 56.6 76 43.4
Thhalv10024697m.g Eutrema salsugineum HOM05D001788 ORTHO05D006995 2.2e-06 56.6 76 46.1
Ah.03g139310 Amaranthus hybridus HOM05D001788 ORTHO05D006995 2.9e-06 56.2 105 41.0
C07p61870 Brassica napus HOM05D001788 ORTHO05D006995 4.9e-06 55.5 76 42.1
Ciclev10027019m.g Citrus clementina HOM05D001788 ORTHO05D006995 4.9e-06 55.5 56 50.0


User provided reference genes

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