Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g02367 Nelumbo nucifera HOM05D006687 ORTHO05D008379 2.2e-238 828.6 413 100.0
TAR636G0889 Trochodendron aralioides HOM05D006687 ORTHO05D008379 3.3e-218 761.5 413 90.8
CDE05G2168 Ceratophyllum demersum HOM05D006687 ORTHO05D008379 5.8e-199 697.6 419 82.6
PSO761G0513 Papaver somniferum HOM05D006687 ORTHO05D008379 2.9e-198 695.3 414 82.4
PSO210G5270 Papaver somniferum HOM05D006687 ORTHO05D008379 3.8e-198 694.9 414 82.1
Aqoxy2G03421 Aquilegia oxysepala HOM05D006687 ORTHO05D008379 1.9e-197 692.6 415 83.9
ClCG05G005070 Citrullus lanatus HOM05D006687 ORTHO05D008379 2.4e-189 665.6 415 80.7
MELO3C006520.2 Cucumis melo HOM05D006687 ORTHO05D008379 4.2e-189 664.8 415 80.5
CsaV3_3G013130 Cucumis sativus L. HOM05D006687 ORTHO05D008379 5.4e-189 664.5 415 80.5
Dinv44552 Davidia involucrata HOM05D006687 ORTHO05D008379 1.3e-185 653.3 416 78.6
RcHm_v2.0_Chr4g0415641 Rosa chinensis HOM05D006687 ORTHO05D008379 1.1e-181 640.2 416 77.6
Sed0004090 Sechium edule HOM05D006687 ORTHO05D008379 3.2e-181 638.6 415 78.1
FAN07G2338 Fragaria x ananassa HOM05D006687 ORTHO05D008379 2.3e-179 632.5 419 76.4
CANSAT78G1673 Cannabis sativa HOM05D006687 ORTHO05D008379 5.7e-178 627.9 417 74.8
FvH4_4g16100 Fragaria vesca HOM05D006687 ORTHO05D008379 5.7e-178 627.9 418 75.8
FAN22G0081 Fragaria x ananassa HOM05D006687 ORTHO05D008379 1.6e-177 626.3 419 75.7
CSS0011956 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 2.8e-177 625.5 410 74.9
CSS0001912 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 2.4e-176 622.5 410 74.6
Prupe.1G016800 Prunus persica HOM05D006687 ORTHO05D008379 2.4e-176 622.5 416 76.2
MD16G1196600 Malus domestica HOM05D006687 ORTHO05D008379 3.1e-176 622.1 416 75.5
Manes.15G030400 Manihot esculenta HOM05D006687 ORTHO05D008379 9.0e-176 620.5 422 75.1
FAN17G0837 Fragaria x ananassa HOM05D006687 ORTHO05D008379 2.0e-175 619.4 419 75.4
FAN12G1590 Fragaria x ananassa HOM05D006687 ORTHO05D008379 2.6e-175 619.0 441 72.3
Actinidia23525 Actinidia chinensis HOM05D006687 ORTHO05D008379 1.7e-174 616.3 411 76.2
MD13G1196100 Malus domestica HOM05D006687 ORTHO05D008379 3.8e-174 615.1 426 74.4
CiPaw.01G168400 Carya illinoinensis HOM05D006687 ORTHO05D008379 6.5e-174 614.4 420 75.2
Gohir.D02G039900 Gossypium hirsutum HOM05D006687 ORTHO05D008379 8.4e-174 614.0 419 74.7
Thecc.04G234600 Theobroma cacao HOM05D006687 ORTHO05D008379 1.1e-173 613.6 419 74.9
COL.COLO4_21511 Corchorus olitorius HOM05D006687 ORTHO05D008379 1.9e-173 612.8 419 74.0
Sed0025649 Sechium edule HOM05D006687 ORTHO05D008379 1.9e-173 612.8 409 76.0
Gorai.005G044200 Gossypium raimondii HOM05D006687 ORTHO05D008379 2.5e-173 612.5 419 74.5
Duzib052G0918 Durio zibethinus HOM05D006687 ORTHO05D008379 1.2e-172 610.1 419 74.0
Gohir.A02G033400 Gossypium hirsutum HOM05D006687 ORTHO05D008379 1.6e-172 609.8 419 73.5
PGR004G1051 Punica granatum HOM05D006687 ORTHO05D008379 2.1e-172 609.4 417 76.0
Haze_00870 Corylus avellana HOM05D006687 ORTHO05D008379 2.7e-172 609.0 425 75.1
arahy.Tifrunner.gnm1.ann1.S3TICT Arachis hypogaea HOM05D006687 ORTHO05D008379 3.5e-172 608.6 423 72.8
arahy.Tifrunner.gnm1.ann1.SVC7LK Arachis hypogaea HOM05D006687 ORTHO05D008379 6.1e-172 607.8 421 73.2
Atru.chr4.2438 Acer truncatum HOM05D006687 ORTHO05D008379 7.9e-172 607.4 420 73.6
Lalb_Chr05g0211161 Lupinus albus HOM05D006687 ORTHO05D008379 2.3e-171 605.9 414 73.9
Cpa.g.sc58.86 Carica papaya HOM05D006687 ORTHO05D008379 3.9e-171 605.1 427 72.6
TWI53G1185 Tripterygium wilfordii HOM05D006687 ORTHO05D008379 8.7e-171 604.0 420 73.3
Phvul.002G042300 Phaseolus vulgaris HOM05D006687 ORTHO05D008379 3.3e-170 602.1 419 72.6
VMungo1215G0895 Vigna mungo HOM05D006687 ORTHO05D008379 6.3e-169 597.8 413 72.6
Glyma.11G008100 Glycine max HOM05D006687 ORTHO05D008379 8.2e-169 597.4 413 73.1
LjContig00222g0006058 Lotus japonicus HOM05D006687 ORTHO05D008379 1.4e-168 596.7 415 72.0
Sabra08G0118100 Salix brachista HOM05D006687 ORTHO05D008379 4.5e-167 591.7 422 73.0
Potri.010G085500 Populus trichocarpa HOM05D006687 ORTHO05D008379 2.9e-166 589.0 418 72.5
THA.LOC104808559 Tarenaya hassleriana HOM05D006687 ORTHO05D008379 2.9e-166 589.0 417 71.0
CAN.G231.10 Capsicum annuum HOM05D006687 ORTHO05D008379 1.0e-163 580.5 413 71.2
QL06p001782 Quercus lobata HOM05D006687 ORTHO05D008379 3.0e-163 578.9 421 70.1
Sc13g0004520 Simmondsia chinensis HOM05D006687 ORTHO05D008379 1.5e-162 576.6 426 70.2
Psat2g189880 Pisum sativum HOM05D006687 ORTHO05D008379 2.2e-161 572.8 413 70.2
Nitab4.5_0000321g0170 Nicotiana tabacum HOM05D006687 ORTHO05D008379 8.2e-161 570.9 414 70.5
Aa31LG8G9120 Aethionema arabicum HOM05D006687 ORTHO05D008379 2.4e-160 569.3 417 69.3
Sp3g20360 Schrenkiella parvula HOM05D006687 ORTHO05D008379 2.4e-160 569.3 417 69.1
Lj3A732T77 Lonicera japonica HOM05D006687 ORTHO05D008379 5.3e-160 568.2 421 69.6
Carub.0003s2274 Capsella rubella HOM05D006687 ORTHO05D008379 6.9e-160 567.8 417 68.3
TPR.G37926 Trifolium pratense HOM05D006687 ORTHO05D008379 6.9e-160 567.8 413 70.9
CARHR098480 Cardamine hirsuta HOM05D006687 ORTHO05D008379 5.9e-159 564.7 418 68.9
Thhalv10020820m.g Eutrema salsugineum HOM05D006687 ORTHO05D008379 7.7e-159 564.3 417 68.6
Ca_24424_v3 Cicer arietinum L. HOM05D006687 ORTHO05D008379 1.0e-158 563.9 413 69.7
Lsat_1_v5_gn_6_103081 Lactuca sativa HOM05D006687 ORTHO05D008379 3.8e-158 562.0 415 71.1
AL3G36890 Arabidopsis lyrata HOM05D006687 ORTHO05D008379 5.0e-158 561.6 417 67.9
Ciclev10005124m.g Citrus clementina HOM05D006687 ORTHO05D008379 1.9e-157 559.7 421 68.6
AT3G22590 Arabidopsis thaliana HOM05D006687 ORTHO05D008379 1.2e-156 557.0 418 67.7
Medtr5g006960 Medicago truncatula HOM05D006687 ORTHO05D008379 4.7e-156 555.1 415 69.4
Solyc06g054080.3 Solanum lycopersicum HOM05D006687 ORTHO05D008379 4.7e-156 555.1 413 68.8
Sopen06g019240 Solanum pennellii HOM05D006687 ORTHO05D008379 4.7e-156 555.1 413 68.8
BraA05t21491Z Brassica rapa HOM05D006687 ORTHO05D008379 6.1e-156 554.7 418 68.7
A05p26080 Brassica napus HOM05D006687 ORTHO05D008379 1.0e-155 553.9 418 68.7
PGSC0003DMG400016264 Solanum tuberosum HOM05D006687 ORTHO05D008379 1.8e-155 553.1 413 68.5
BcaC05g28033 Brassica carinata HOM05D006687 ORTHO05D008379 1.5e-154 550.1 418 68.7
C05p40480 Brassica napus HOM05D006687 ORTHO05D008379 1.5e-154 550.1 418 68.7
BolC5t32790H Brassica oleracea HOM05D006687 ORTHO05D008379 1.5e-154 550.1 418 68.7
Hund10579 Selenicereus undatus HOM05D006687 ORTHO05D008379 4.4e-154 548.5 423 69.0
BcaB06g26371 Brassica carinata HOM05D006687 ORTHO05D008379 7.4e-154 547.7 418 68.7
Hma1.2p1_1572F.1_g291370 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 2.8e-153 545.8 412 68.7
GSVIVG01018007001 Vitis vinifera HOM05D006687 ORTHO05D008379 4.5e-151 538.5 413 69.7
ECA246G3355 Erigeron canadensis HOM05D006687 ORTHO05D008379 1.8e-147 526.6 414 66.9
AUR62034718 Chenopodium quinoa HOM05D006687 ORTHO05D008379 4.4e-146 521.9 425 65.9
Ah.13g071710 Amaranthus hybridus HOM05D006687 ORTHO05D008379 1.3e-145 520.4 420 66.7
HanXRQChr11g0327791 Helianthus annuus HOM05D006687 ORTHO05D008379 1.3e-145 520.4 408 68.1
DCAR_024171 Daucus carota HOM05D006687 ORTHO05D008379 2.8e-145 519.2 383 71.0
AUR62033670 Chenopodium quinoa HOM05D006687 ORTHO05D008379 1.4e-144 516.9 426 65.5
Actinidia40137 Actinidia chinensis HOM05D006687 ORTHO05D008379 2.4e-144 516.2 407 68.1
EL10Ac3g06489 Beta vulgaris HOM05D006687 ORTHO05D008379 2.4e-144 516.2 422 65.4
SGA_v2.0_scaffold191G40505 Striga asiatica HOM05D006687 ORTHO05D008379 3.5e-143 512.3 416 65.1
SalBow2G2000 Salvia bowleyana HOM05D006687 ORTHO05D008379 1.7e-142 510.0 413 65.1
Oeu042805.1 Olea europaea HOM05D006687 ORTHO05D008379 1.5e-141 506.9 410 65.4
ATR0665G006 Amborella trichopoda HOM05D006687 ORTHO05D008379 2.7e-140 502.7 476 57.8
Migut.G00354 Erythranthe guttata HOM05D006687 ORTHO05D008379 1.4e-139 500.4 414 63.3
Peaxi162Scf00131g00127 Petunia axillaris HOM05D006687 ORTHO05D008379 5.2e-139 498.4 400 65.2
Sc13g0006070 Simmondsia chinensis HOM05D006687 ORTHO05D008379 6.8e-131 471.5 367 67.3
unitig_749.g14072 Utricularia gibba HOM05D006687 ORTHO05D008379 4.9e-129 465.3 418 60.5
Cc03_g04010 Coffea canephora HOM05D006687 ORTHO05D008379 5.9e-127 458.4 414 59.7
Eucgr.H03443 Eucalyptus grandis HOM05D006687 ORTHO05D008379 4.7e-124 448.7 258 87.2
SEGI_38182 Sequoiadendron giganteum HOM05D006687 ORTHO05D008379 7.0e-120 434.9 462 52.2
Potri.008G155000 Populus trichocarpa HOM05D006687 ORTHO05D008379 6.2e-116 421.8 259 83.4
Rhsim04G0200900 Rhododendron simsii HOM05D006687 ORTHO05D008379 6.4e-113 411.8 349 62.5
HPP92_018620 Vanilla planifolia HOM05D006687 ORTHO05D008379 2.8e-108 396.4 241 81.7
Mapoly0001s0040 Marchantia polymorpha HOM05D006687 ORTHO05D008379 2.5e-101 373.2 472 44.7
Hma1.2p1_1572F.1_g291380 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 1.2e-100 370.9 301 66.4
Zm00001eb217880 Zea mays HOM05D006687 ORTHO05D008379 1.4e-99 367.5 418 49.3
Os03g0664700 Oryza sativa ssp. japonica HOM05D006687 ORTHO05D008379 1.6e-95 354.0 419 48.7
Hma1.2p1_2201F.1_g317030 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 2.1e-95 353.6 250 72.8
Pp3c6_19770 Physcomitrium patens HOM05D006687 ORTHO05D008379 2.8e-92 343.2 467 44.3
Dinv14009 Davidia involucrata HOM05D006687 ORTHO05D008379 5.3e-83 312.4 290 59.7
TAR365G0539 Trochodendron aralioides HOM05D006687 ORTHO05D008379 3.4e-82 309.7 186 82.3
AagrBONN_evm.TU.Sc2ySwM_344.3801 Anthoceros agrestis HOM05D006687 ORTHO05D008379 1.3e-78 297.7 444 41.7
CBR_g48312 Chara braunii HOM05D006687 ORTHO05D008379 5.1e-46 189.5 163 54.0
PRCOL_00002517 Prasinoderma coloniale HOM05D006687 ORTHO05D008379 9.4e-40 168.7 489 28.2
Cre02.g104550 Chlamydomonas reinhardtii HOM05D006687 ORTHO05D008379 2.6e-37 160.6 498 27.1
Oeu042804.1 Olea europaea HOM05D006687 ORTHO05D008379 1.1e-35 155.2 174 48.9
Dinv10241 Davidia involucrata HOM05D006687 ORTHO05D008379 4.1e-35 153.3 200 47.5
MCO02G458 Micromonas commoda HOM05D006687 ORTHO05D008379 3.2e-32 143.7 441 27.2
Rhsim04G0201000 Rhododendron simsii HOM05D001311 ORTHO05D001204 3.3e-29 133.7 136 50.7
HanXRQChr12g0381471 Helianthus annuus HOM05D006687 ORTHO05D008379 1.0e-25 122.1 108 58.3
MD13G1132600 Malus domestica HOM05D006687 ORTHO05D008379 3.2e-24 117.1 70 84.3
MD09G1133500 Malus domestica HOM05D006687 ORTHO05D008379 5.5e-24 116.3 98 65.3
vmacro02845 Vaccinium macrocarpon HOM05D006687 ORTHO05D008379 9.8e-13 79.0 104 42.3


User provided reference genes

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