Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g02104 Nelumbo nucifera HOM05D003767 ORTHO05D004507 2.3e-66 255.4 127 100.0
TAR365G0614 Trochodendron aralioides HOM05D003767 ORTHO05D004507 5.2e-50 201.1 125 75.2
Aqoxy2G03198 Aquilegia oxysepala HOM05D003767 ORTHO05D004507 5.8e-49 197.6 125 72.8
Gohir.A11G224810 Gossypium hirsutum HOM05D003767 ORTHO05D004507 5.8e-49 197.6 125 69.6
Atru.chr2.496 Acer truncatum HOM05D003767 ORTHO05D004507 7.6e-49 197.2 125 69.6
Thecc.02G212900 Theobroma cacao HOM05D003767 ORTHO05D004507 1.3e-48 196.4 125 70.4
Gorai.003G066300 Gossypium raimondii HOM05D003767 ORTHO05D004507 2.9e-48 195.3 125 68.8
Actinidia23606 Actinidia chinensis HOM05D003767 ORTHO05D004507 6.4e-48 194.1 126 69.0
Duzib147G0043 Durio zibethinus HOM05D003767 ORTHO05D004507 6.4e-48 194.1 125 68.0
Potri.013G026800 Populus trichocarpa HOM05D003767 ORTHO05D004507 8.4e-48 193.7 125 68.8
Actinidia05727 Actinidia chinensis HOM05D003767 ORTHO05D004507 3.2e-47 191.8 126 68.3
Ah.06g190170 Amaranthus hybridus HOM05D003767 ORTHO05D004507 3.2e-47 191.8 125 68.0
Gohir.D11G232600 Gossypium hirsutum HOM05D003767 ORTHO05D004507 3.2e-47 191.8 125 68.0
Lj9A681G36 Lonicera japonica HOM05D003767 ORTHO05D004507 3.2e-47 191.8 126 67.5
GSVIVG01022056001 Vitis vinifera HOM05D003767 ORTHO05D004507 3.2e-47 191.8 126 66.7
CSS0007130 Camellia sinensis var. sinensis HOM05D003767 ORTHO05D004507 7.1e-47 190.7 126 69.0
Potri.005G038100 Populus trichocarpa HOM05D003767 ORTHO05D004507 1.2e-46 189.9 125 66.4
TWI56G0745 Tripterygium wilfordii HOM05D003767 ORTHO05D004507 1.2e-46 189.9 125 68.0
COL.COLO4_12128 Corchorus olitorius HOM05D003767 ORTHO05D004507 1.6e-46 189.5 125 66.4
PSO832G1867 Papaver somniferum HOM05D003767 ORTHO05D004507 1.6e-46 189.5 126 70.6
Rhsim07G0179200 Rhododendron simsii HOM05D003767 ORTHO05D004507 1.6e-46 189.5 125 66.4
MELO3C015345.2 Cucumis melo HOM05D003767 ORTHO05D004507 2.1e-46 189.1 125 68.0
Hma1.2p1_0666F.1_g199390 Hydrangea macrophylla HOM05D003767 ORTHO05D004507 2.1e-46 189.1 126 65.9
EL10Ac4g09299 Beta vulgaris HOM05D003767 ORTHO05D004507 2.7e-46 188.7 125 68.0
QL03p004251 Quercus lobata HOM05D003767 ORTHO05D004507 2.7e-46 188.7 125 67.2
FAN09G3025 Fragaria x ananassa HOM05D003767 ORTHO05D004507 4.6e-46 188.0 125 67.2
Sed0026847 Sechium edule HOM05D003767 ORTHO05D004507 4.6e-46 188.0 125 67.2
Cfa006539 Carpinus fangiana HOM05D003767 ORTHO05D004507 7.8e-46 187.2 125 67.2
CiPaw.08G167300 Carya illinoinensis HOM05D003767 ORTHO05D004507 7.8e-46 187.2 126 65.9
Eucgr.H04452 Eucalyptus grandis HOM05D003767 ORTHO05D004507 7.8e-46 187.2 125 66.4
FAN05G1904 Fragaria x ananassa HOM05D003767 ORTHO05D004507 7.8e-46 187.2 125 67.2
ClCG03G016760 Citrullus lanatus HOM05D003767 ORTHO05D004507 1.0e-45 186.8 125 67.2
MD04G1210100 Malus domestica HOM05D003767 ORTHO05D004507 1.3e-45 186.4 125 68.0
RhsimUnG0080300 Rhododendron simsii HOM05D003767 ORTHO05D004507 1.3e-45 186.4 125 64.8
Sc09g0003380 Simmondsia chinensis HOM05D003767 ORTHO05D004507 1.3e-45 186.4 126 65.1
Zm00001eb137820 Zea mays HOM05D003767 ORTHO05D004507 1.3e-45 186.4 125 65.6
FvH4_6g05260 Fragaria vesca HOM05D003767 ORTHO05D004507 1.7e-45 186.0 125 66.4
FAN14G0860 Fragaria x ananassa HOM05D003767 ORTHO05D004507 1.7e-45 186.0 125 66.4
FAN14G3644 Fragaria x ananassa HOM05D003767 ORTHO05D004507 1.7e-45 186.0 125 66.4
CANSAT54G0870 Cannabis sativa HOM05D003767 ORTHO05D004507 2.3e-45 185.7 125 68.0
PSO210G1178 Papaver somniferum HOM05D003767 ORTHO05D004507 2.3e-45 185.7 126 69.8
Sabra05G0038000 Salix brachista HOM05D003767 ORTHO05D004507 2.3e-45 185.7 125 64.8
AUR62000859 Chenopodium quinoa HOM05D003767 ORTHO05D004507 3.9e-45 184.9 125 65.6
FAN05G2944 Fragaria x ananassa HOM05D003767 ORTHO05D004507 3.9e-45 184.9 125 66.4
RcHm_v2.0_Chr3g0453991 Rosa chinensis HOM05D003767 ORTHO05D004507 3.9e-45 184.9 125 66.4
Hund07038 Selenicereus undatus HOM05D003767 ORTHO05D004507 5.1e-45 184.5 125 65.6
HanXRQChr14g0446461 Helianthus annuus HOM05D003767 ORTHO05D004507 6.6e-45 184.1 124 66.9
MD12G1224500 Malus domestica HOM05D003767 ORTHO05D004507 8.7e-45 183.7 125 66.4
Prupe.6G331000 Prunus persica HOM05D003767 ORTHO05D004507 8.7e-45 183.7 125 66.4
AUR62005115 Chenopodium quinoa HOM05D003767 ORTHO05D004507 1.1e-44 183.3 125 64.8
HPP92_001826 Vanilla planifolia HOM05D003767 ORTHO05D004507 1.1e-44 183.3 125 66.4
Os12g0263000 Oryza sativa ssp. japonica HOM05D003767 ORTHO05D004507 2.5e-44 182.2 126 66.7
Aqoxy5G00559 Aquilegia oxysepala HOM05D003767 ORTHO05D004507 3.3e-44 181.8 124 69.4
BcaC04g23683 Brassica carinata HOM05D003767 ORTHO05D004507 3.3e-44 181.8 125 64.8
C09p05700 Brassica napus HOM05D003767 ORTHO05D004507 3.3e-44 181.8 125 64.8
BolC9t53499H Brassica oleracea HOM05D003767 ORTHO05D004507 3.3e-44 181.8 125 64.8
PGR031G1040 Punica granatum HOM05D003767 ORTHO05D004507 3.3e-44 181.8 125 63.2
BcaNung02467 Brassica carinata HOM05D003767 ORTHO05D004507 4.3e-44 181.4 125 65.6
A06p37610 Brassica napus HOM05D003767 ORTHO05D004507 4.3e-44 181.4 125 65.6
A09p05240 Brassica napus HOM05D003767 ORTHO05D004507 4.3e-44 181.4 125 64.8
C07p40700 Brassica napus HOM05D003767 ORTHO05D004507 4.3e-44 181.4 125 65.6
BolC7t44598H Brassica oleracea HOM05D003767 ORTHO05D004507 4.3e-44 181.4 125 65.6
BraA06t26680Z Brassica rapa HOM05D003767 ORTHO05D004507 4.3e-44 181.4 125 65.6
BraA09t36163Z Brassica rapa HOM05D003767 ORTHO05D004507 4.3e-44 181.4 125 64.8
ECA238G2357 Erigeron canadensis HOM05D003767 ORTHO05D004507 5.6e-44 181.0 124 66.9
Manes.09G162900 Manihot esculenta HOM05D003767 ORTHO05D004507 5.6e-44 181.0 125 64.0
Oeu027914.1 Olea europaea HOM05D003767 ORTHO05D004507 5.6e-44 181.0 126 62.7
BcaB04g19665 Brassica carinata HOM05D003767 ORTHO05D004507 9.6e-44 180.3 125 64.0
BcaNung04364 Brassica carinata HOM05D003767 ORTHO05D004507 9.6e-44 180.3 124 65.3
Sp2g20600 Schrenkiella parvula HOM05D003767 ORTHO05D004507 9.6e-44 180.3 125 64.8
Manes.08G123500 Manihot esculenta HOM05D003767 ORTHO05D004507 1.3e-43 179.9 125 62.4
Ciclev10000728m.g Citrus clementina HOM05D003767 ORTHO05D004507 1.6e-43 179.5 124 66.1
vmacro05036 Vaccinium macrocarpon HOM05D003767 ORTHO05D004507 2.1e-43 179.1 125 64.8
MSTRG.8108 Avicennia marina HOM05D003767 ORTHO05D004507 3.6e-43 178.3 125 65.6
Cc02_g32590 Coffea canephora HOM05D003767 ORTHO05D004507 6.2e-43 177.6 125 62.4
Medtr7g113890 Medicago truncatula HOM05D003767 ORTHO05D004507 6.2e-43 177.6 125 64.8
ATR0626G007 Amborella trichopoda HOM05D003767 ORTHO05D004507 1.1e-42 176.8 126 64.3
Lalb_Chr15g0077051 Lupinus albus HOM05D003767 ORTHO05D004507 1.1e-42 176.8 125 66.4
arahy.Tifrunner.gnm1.ann1.1T3PYK Arachis hypogaea HOM05D003767 ORTHO05D004507 1.4e-42 176.4 125 64.8
CARHR185970 Cardamine hirsuta HOM05D003767 ORTHO05D004507 1.4e-42 176.4 125 64.0
Cpa.g.sc48.5 Carica papaya HOM05D003767 ORTHO05D004507 1.4e-42 176.4 126 62.7
HanXRQChr10g0295061 Helianthus annuus HOM05D003767 ORTHO05D004507 1.4e-42 176.4 124 65.3
Lj1g0000488 Lotus japonicus HOM05D003767 ORTHO05D004507 1.4e-42 176.4 125 61.6
Thhalv10003956m.g Eutrema salsugineum HOM05D003767 ORTHO05D004507 1.8e-42 176.0 125 63.2
arahy.Tifrunner.gnm1.ann1.RYM43V Arachis hypogaea HOM05D003767 ORTHO05D004507 2.4e-42 175.6 125 64.8
TPR.G33204 Trifolium pratense HOM05D003767 ORTHO05D004507 4.0e-42 174.9 125 63.2
DCAR_029443 Daucus carota HOM05D003767 ORTHO05D004507 5.3e-42 174.5 126 61.9
Glyma.19G237800 Glycine max HOM05D003767 ORTHO05D004507 5.3e-42 174.5 126 65.1
Glyma.19G237900 Glycine max HOM05D003767 ORTHO05D004507 9.0e-42 173.7 126 63.5
Os12g0528400 Oryza sativa ssp. japonica HOM05D003767 ORTHO05D004507 9.0e-42 173.7 125 63.2
Migut.F01584 Erythranthe guttata HOM05D003767 ORTHO05D004507 1.2e-41 173.3 126 61.9
Lj1g0009738 Lotus japonicus HOM05D003767 ORTHO05D004507 2.6e-41 172.2 125 62.4
Psat3g009360 Pisum sativum HOM05D003767 ORTHO05D004507 2.6e-41 172.2 125 63.2
TPR.G33164 Trifolium pratense HOM05D003767 ORTHO05D004507 2.6e-41 172.2 125 64.8
Aa31LG11G9150 Aethionema arabicum HOM05D003767 ORTHO05D004507 3.4e-41 171.8 125 63.2
DCAR_005538 Daucus carota HOM05D003767 ORTHO05D004507 3.4e-41 171.8 126 60.3
CSS0020414 Camellia sinensis var. sinensis HOM05D003767 ORTHO05D004507 4.5e-41 171.4 113 65.5
Ca_09375_v3 Cicer arietinum L. HOM05D003767 ORTHO05D004507 5.8e-41 171.0 125 60.8
ECA238G1346 Erigeron canadensis HOM05D003767 ORTHO05D004507 5.8e-41 171.0 124 62.9
Lsat_1_v5_gn_2_64341 Lactuca sativa HOM05D003767 ORTHO05D004507 5.8e-41 171.0 127 63.0
Solyc01g098610.4 Solanum lycopersicum HOM05D003767 ORTHO05D004507 5.8e-41 171.0 125 63.2
Sopen01g042160 Solanum pennellii HOM05D003767 ORTHO05D004507 5.8e-41 171.0 125 63.2
DCAR_002932 Daucus carota HOM05D003767 ORTHO05D004507 7.6e-41 170.6 126 60.3
PGSC0003DMG400028599 Solanum tuberosum HOM05D003767 ORTHO05D004507 7.6e-41 170.6 125 62.4
AL6G39640 Arabidopsis lyrata HOM05D003767 ORTHO05D004507 9.9e-41 170.2 125 61.6
CSS0005723 Camellia sinensis var. sinensis HOM05D003767 ORTHO05D004507 9.9e-41 170.2 113 65.5
MBI17_g18114_MAGBIO Magnolia biondii HOM05D003767 ORTHO05D004507 9.9e-41 170.2 157 53.5
Phvul.006G094700 Phaseolus vulgaris HOM05D003767 ORTHO05D004507 9.9e-41 170.2 126 62.7
THA.LOC104821704 Tarenaya hassleriana HOM05D003767 ORTHO05D004507 9.9e-41 170.2 125 62.4
Lalb_Chr18g0045501 Lupinus albus HOM05D003767 ORTHO05D004507 1.3e-40 169.9 125 63.2
Ca_09376_v3 Cicer arietinum L. HOM05D003767 ORTHO05D004507 1.7e-40 169.5 125 63.2
AT5G27380 Arabidopsis thaliana HOM05D003767 ORTHO05D004507 2.9e-40 168.7 125 61.6
Os11g0642800 Oryza sativa ssp. japonica HOM05D003767 ORTHO05D004507 2.9e-40 168.7 125 61.6
Psat3g009920 Pisum sativum HOM05D003767 ORTHO05D004507 3.8e-40 168.3 125 60.0
SGA_v2.0_scaffold13G06464 Striga asiatica HOM05D003767 ORTHO05D004507 3.8e-40 168.3 127 63.0
Phvul.006G094600 Phaseolus vulgaris HOM05D003767 ORTHO05D004507 6.4e-40 167.5 126 60.3
VMungo0540G2084 Vigna mungo HOM05D003767 ORTHO05D004507 8.4e-40 167.2 127 63.0
Carub.0006s2517 Capsella rubella HOM05D003767 ORTHO05D004507 1.4e-39 166.4 125 58.4
CDE02G2107 Ceratophyllum demersum HOM05D000488 ORTHO05D000347 1.4e-39 166.4 117 64.1
unitig_26.g9470 Utricularia gibba HOM05D003767 ORTHO05D004507 1.9e-39 166.0 125 60.0
Glyma.03G240600 Glycine max HOM05D003767 ORTHO05D004507 2.4e-39 165.6 125 60.0
Glyma.19G237700 Glycine max HOM05D003767 ORTHO05D004507 2.4e-39 165.6 125 60.0
Medtr7g113880 Medicago truncatula HOM05D003767 ORTHO05D004507 2.4e-39 165.6 125 58.4
Peaxi162Scf00434g00336 Petunia axillaris HOM05D003767 ORTHO05D004507 3.2e-39 165.2 126 60.3
VMungo0540G0577 Vigna mungo HOM05D003767 ORTHO05D004507 3.2e-39 165.2 125 60.0
Phvul.006G094500 Phaseolus vulgaris HOM05D003767 ORTHO05D004507 5.4e-39 164.5 125 60.0
SalBow6G1775 Salvia bowleyana HOM05D003767 ORTHO05D003551 5.4e-39 164.5 116 66.4
Nitab4.5_0001423g0150 Nicotiana tabacum HOM05D003767 ORTHO05D004507 7.1e-39 164.1 126 61.1
Zm00001eb115490 Zea mays HOM05D003767 ORTHO05D004507 1.6e-38 162.9 125 61.6
CAN.G1134.12 Capsicum annuum HOM05D003767 ORTHO05D004507 3.5e-38 161.8 124 59.7
Eucgr.H04446 Eucalyptus grandis HOM05D003767 ORTHO05D004507 3.5e-38 161.8 112 62.5
Nitab4.5_0004940g0030 Nicotiana tabacum HOM05D003767 ORTHO05D004507 6.0e-38 161.0 124 60.5
SMO271G0026 Selaginella moellendorffii HOM05D003767 ORTHO05D004507 1.8e-34 149.4 125 56.8
Pp3c1_36280 Physcomitrium patens HOM05D003767 ORTHO05D004507 5.3e-34 147.9 125 55.2
Nn1g08367 Nelumbo nucifera HOM05D003767 ORTHO05D004507 4.9e-32 141.4 84 77.4
Mapoly0002s0041 Marchantia polymorpha HOM05D003767 ORTHO05D004507 6.4e-32 141.0 126 51.6
CBR_g15993 Chara braunii HOM05D003767 ORTHO05D004507 1.0e-29 133.7 126 50.0
Cre17.g708800 Chlamydomonas reinhardtii HOM05D003767 ORTHO05D004507 1.8e-29 132.9 126 49.2
Actinidia24503 Actinidia chinensis HOM05D003767 ORTHO05D004507 3.7e-27 125.2 91 63.7
TAR636G2499 Trochodendron aralioides HOM05D003767 ORTHO05D004507 1.5e-25 119.8 75 72.0
MCO07G639 Micromonas commoda HOM05D003767 ORTHO05D004507 4.5e-25 118.2 125 48.0
PRCOL_00004575 Prasinoderma coloniale HOM05D003767 ORTHO05D004507 1.4e-23 113.2 121 48.8
SMO304G0030 Selaginella moellendorffii HOM05D003767 ORTHO05D004507 1.4e-18 96.7 107 50.5
Cfa024552 Carpinus fangiana HOM05D003767 ORTHO05D004507 1.9e-15 86.3 116 38.8
RcHm_v2.0_Chr2g0172951 Rosa chinensis HOM05D003767 ORTHO05D004507 6.3e-11 71.2 51 58.8


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