Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g01934 Nelumbo nucifera HOM05D006533 ORTHO05D008625 2.2e-216 755.4 381 100.0
TAR374G0999 Trochodendron aralioides HOM05D006533 ORTHO05D008625 4.3e-156 555.1 412 70.6
MBI04_g36026_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 1.2e-142 510.4 364 70.9
CSS0012834 Camellia sinensis var. sinensis HOM05D006533 ORTHO05D008625 7.1e-135 484.6 367 68.7
GSVIVG01024411001 Vitis vinifera HOM05D006533 ORTHO05D008625 6.7e-133 478.0 417 62.1
Duzib264G0907 Durio zibethinus HOM05D006533 ORTHO05D008625 7.4e-132 474.6 378 66.9
Manes.09G124800 Manihot esculenta HOM05D006533 ORTHO05D008625 1.6e-131 473.4 379 67.0
QL09p024067 Quercus lobata HOM05D006533 ORTHO05D008625 1.5e-129 466.8 411 61.3
Actinidia34305 Actinidia chinensis HOM05D006533 ORTHO05D008625 1.0e-128 464.2 393 63.4
CiPaw.06G033000 Carya illinoinensis HOM05D006533 ORTHO05D008625 1.3e-128 463.8 408 61.3
COL.COLO4_35796 Corchorus olitorius HOM05D006533 ORTHO05D008625 1.9e-127 459.9 373 64.9
Thecc.01G135900 Theobroma cacao HOM05D006533 ORTHO05D008625 1.8e-125 453.4 408 61.5
Gorai.006G005800 Gossypium raimondii HOM05D006533 ORTHO05D008625 5.7e-124 448.4 409 60.4
Gohir.D09G004200 Gossypium hirsutum HOM05D006533 ORTHO05D008625 1.3e-123 447.2 409 60.4
Gohir.A09G004900 Gossypium hirsutum HOM05D006533 ORTHO05D008625 2.8e-123 446.0 409 60.1
FvH4_7g33920 Fragaria vesca HOM05D006533 ORTHO05D008625 3.1e-122 442.6 410 59.5
RcHm_v2.0_Chr1g0384131 Rosa chinensis HOM05D006533 ORTHO05D008625 2.6e-121 439.5 411 59.1
Eucgr.K00088 Eucalyptus grandis HOM05D006533 ORTHO05D008625 7.7e-121 438.0 399 60.2
Prupe.2G325700 Prunus persica HOM05D006533 ORTHO05D008625 7.7e-121 438.0 409 59.4
PSO063G2320 Papaver somniferum HOM05D006533 ORTHO05D008625 1.3e-120 437.2 398 59.3
CANSAT56G3916 Cannabis sativa HOM05D006533 ORTHO05D008625 1.7e-120 436.8 412 57.0
CANSAT56G1022 Cannabis sativa HOM05D006533 ORTHO05D008625 2.2e-120 436.4 412 57.0
Lj6g0021866 Lotus japonicus HOM05D006533 ORTHO05D008625 2.2e-120 436.4 404 60.6
MELO3C006767.2 Cucumis melo HOM05D006533 ORTHO05D008625 3.8e-120 435.6 399 59.1
FAN10G3989 Fragaria x ananassa HOM05D006533 ORTHO05D008625 3.8e-120 435.6 408 58.8
Sabra13G0070900 Salix brachista HOM05D006533 ORTHO05D008625 5.0e-120 435.3 410 59.8
Oeu060384.1 Olea europaea HOM05D006533 ORTHO05D008625 1.1e-119 434.1 408 59.6
MD07G1308500 Malus domestica HOM05D006533 ORTHO05D008625 1.9e-119 433.3 409 59.2
Hund09790 Selenicereus undatus HOM05D006533 ORTHO05D008625 2.5e-119 433.0 381 58.0
Potri.013G082000 Populus trichocarpa HOM05D006533 ORTHO05D008625 1.2e-118 430.6 414 59.2
Aqoxy3G02101 Aquilegia oxysepala HOM05D006533 ORTHO05D008625 3.6e-118 429.1 402 57.7
Lalb_Chr09g0320221 Lupinus albus HOM05D006533 ORTHO05D008625 3.6e-118 429.1 399 59.4
Glyma.01G228300 Glycine max HOM05D006533 ORTHO05D008625 7.9e-118 427.9 399 59.9
Ca_24442_v3 Cicer arietinum L. HOM05D006533 ORTHO05D008625 1.0e-117 427.6 403 59.8
Peaxi162Scf00133g00721 Petunia axillaris HOM05D006533 ORTHO05D008625 1.0e-117 427.6 372 61.0
Cc02_g00290 Coffea canephora HOM05D006533 ORTHO05D008625 3.0e-117 426.0 420 57.4
Ciclev10020455m.g Citrus clementina HOM05D006533 ORTHO05D008625 3.9e-117 425.6 413 58.4
Phvul.002G039600 Phaseolus vulgaris HOM05D006533 ORTHO05D008625 3.9e-117 425.6 402 58.7
arahy.Tifrunner.gnm1.ann1.NII7HE Arachis hypogaea HOM05D006533 ORTHO05D008625 8.8e-117 424.5 407 59.2
FAN03G0602 Fragaria x ananassa HOM05D006533 ORTHO05D008625 8.8e-117 424.5 410 58.0
CsaV3_3G015700 Cucumis sativus L. HOM05D006533 ORTHO05D008625 1.1e-116 424.1 415 56.1
PGR142G1840 Punica granatum HOM05D006533 ORTHO05D008625 2.0e-116 423.3 411 57.7
MSTRG.8576 Avicennia marina HOM05D006533 ORTHO05D008625 1.3e-115 420.6 409 55.5
Medtr5g007700 Medicago truncatula HOM05D006533 ORTHO05D008625 1.7e-115 420.2 402 59.0
Glyma.11G011100 Glycine max HOM05D006533 ORTHO05D008625 2.8e-115 419.5 399 58.9
ClCG05G007010 Citrullus lanatus HOM05D006533 ORTHO05D008625 8.2e-115 417.9 415 55.2
Sed0002742 Sechium edule HOM05D006533 ORTHO05D008625 8.2e-115 417.9 399 55.4
AUR62028174 Chenopodium quinoa HOM05D006533 ORTHO05D008625 2.4e-114 416.4 419 55.1
AUR62002060 Chenopodium quinoa HOM05D006533 ORTHO05D008625 4.1e-114 415.6 414 55.1
ECA232G2080 Erigeron canadensis HOM05D006533 ORTHO05D008625 5.3e-114 415.2 397 57.4
SGA_v2.0_scaffold18G08508 Striga asiatica HOM05D006533 ORTHO05D008625 2.6e-113 412.9 413 54.7
Atru.chr1.2781 Acer truncatum HOM05D006533 ORTHO05D008625 3.4e-113 412.5 407 56.3
arahy.Tifrunner.gnm1.ann1.YJZS8S Arachis hypogaea HOM05D006533 ORTHO05D008625 4.5e-113 412.1 429 55.9
Cfa006012 Carpinus fangiana HOM05D006533 ORTHO05D008625 7.7e-113 411.4 410 58.3
PSO782G0079 Papaver somniferum HOM05D006533 ORTHO05D008625 7.7e-113 411.4 385 58.4
Solyc02g094260.1 Solanum lycopersicum HOM05D006533 ORTHO05D008625 1.0e-112 411.0 416 54.8
SalBow4G2334 Salvia bowleyana HOM05D006533 ORTHO05D008625 1.7e-112 410.2 381 58.8
Migut.F00098 Erythranthe guttata HOM05D006533 ORTHO05D008625 2.2e-112 409.8 414 55.8
Sopen02g038900 Solanum pennellii HOM05D006533 ORTHO05D008625 2.2e-112 409.8 416 55.0
EL10Ac3g05080 Beta vulgaris HOM05D006533 ORTHO05D008625 5.5e-111 405.2 431 52.9
PGSC0003DMG400020249 Solanum tuberosum HOM05D006533 ORTHO05D008625 7.2e-111 404.8 415 54.2
Cpa.g.sc39.72 Carica papaya HOM05D006533 ORTHO05D008625 2.7e-110 402.9 371 58.5
AL6G27960 Arabidopsis lyrata HOM05D006533 ORTHO05D008625 3.6e-110 402.5 409 55.5
Psat2g188880 Pisum sativum HOM05D006533 ORTHO05D008625 1.0e-109 401.0 398 57.0
Lj3A887G72 Lonicera japonica HOM05D006533 ORTHO05D008625 1.8e-109 400.2 406 55.2
THA.LOC104820882 Tarenaya hassleriana HOM05D006533 ORTHO05D008625 1.8e-109 400.2 413 56.7
Sc06g0002540 Simmondsia chinensis HOM05D006533 ORTHO05D008625 5.1e-109 398.7 397 55.9
CARHR196200 Cardamine hirsuta HOM05D006533 ORTHO05D008625 1.5e-108 397.1 409 54.8
VMungo1215G1087 Vigna mungo HOM05D006533 ORTHO05D008625 2.6e-108 396.4 378 58.2
Aa31LG11G12640 Aethionema arabicum HOM05D006533 ORTHO05D008625 5.7e-108 395.2 414 55.3
Lsat_1_v5_gn_9_47461 Lactuca sativa HOM05D006533 ORTHO05D008625 1.3e-107 394.0 400 55.0
vmacro06509 Vaccinium macrocarpon HOM05D006533 ORTHO05D008625 3.7e-107 392.5 397 56.2
HPP92_005443 Vanilla planifolia HOM05D006533 ORTHO05D008625 6.3e-107 391.7 394 54.3
Rhsim03G0221300 Rhododendron simsii HOM05D006533 ORTHO05D008625 1.2e-105 387.5 382 56.5
Sabra06G0125800 Salix brachista HOM05D006533 ORTHO05D008625 3.5e-105 386.0 410 55.1
Ah.04g156530 Amaranthus hybridus HOM05D006533 ORTHO05D008625 9.4e-103 377.9 384 53.1
ATR0829G094 Amborella trichopoda HOM05D006533 ORTHO05D008625 9.4e-103 377.9 421 52.0
HanXRQChr05g0141721 Helianthus annuus HOM05D006533 ORTHO05D008625 3.6e-102 375.9 400 53.5
Nitab4.5_0001510g0030 Nicotiana tabacum HOM05D006533 ORTHO05D008625 3.0e-101 372.9 440 50.9
Hma1.2p1_3802F.1_g337635 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 4.4e-100 369.0 338 58.9
LjContig00222g0024674 Lotus japonicus HOM05D006533 ORTHO05D008625 5.7e-100 368.6 367 58.3
Nitab4.5_0005342g0010 Nicotiana tabacum HOM05D006533 ORTHO05D008625 1.7e-99 367.1 463 48.2
Medtr5g061700 Medicago truncatula HOM05D006533 ORTHO05D008625 4.8e-99 365.5 407 53.6
CDE11G1068 Ceratophyllum demersum HOM05D006533 ORTHO05D004827 2.6e-97 359.8 383 52.7
unitig_0.g2430 Utricularia gibba HOM05D006533 ORTHO05D008625 7.7e-97 358.2 406 50.2
CAN.G473.117 Capsicum annuum HOM05D006533 ORTHO05D008625 8.5e-96 354.8 374 54.3
Hma1.2p1_0758F.1_g213747 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.6e-94 350.5 302 62.3
SalBow4G1971 Salvia bowleyana HOM05D006533 ORTHO05D008625 1.8e-93 347.1 331 58.9
Hma1.2p1_0758F.1_g213741 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 4.0e-93 345.9 309 60.8
Hma1.2p1_0758F.1_g213730 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 6.8e-93 345.1 311 60.5
Os06g0114600 Oryza sativa ssp. japonica HOM05D006533 ORTHO05D008625 8.8e-93 344.7 355 50.7
Dinv17259 Davidia involucrata HOM05D006533 ORTHO05D008625 1.1e-90 337.8 312 58.7
DCAR_009009 Daucus carota HOM05D006533 ORTHO05D008625 2.4e-90 336.7 354 55.1
Hma1.2p1_0758F.1_g213704 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 3.1e-90 336.3 270 65.6
Hma1.2p1_0758F.1_g213725 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 9.1e-90 334.7 270 65.6
Hma1.2p1_0758F.1_g213746 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 9.1e-90 334.7 270 65.6
Hma1.2p1_3802F.1_g337637 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 9.1e-90 334.7 270 65.6
Mapoly0015s0191 Marchantia polymorpha HOM05D006533 ORTHO05D008625 4.2e-87 325.9 461 42.5
SMO340G0278 Selaginella moellendorffii HOM05D006533 ORTHO05D008625 2.7e-81 306.6 415 44.6
Zm00001eb268960 Zea mays HOM05D006533 ORTHO05D008625 5.0e-80 302.4 325 48.9
Pp3c15_5730 Physcomitrium patens HOM05D006533 ORTHO05D008625 6.3e-75 285.4 439 41.7
TPR.G22023 Trifolium pratense HOM05D006533 ORTHO05D008625 2.4e-66 256.9 181 73.5
Psat2g075360 Pisum sativum HOM05D006533 ORTHO05D008625 2.5e-63 246.9 297 50.8
QL09p024429 Quercus lobata HOM05D006533 ORTHO05D008625 6.8e-61 238.8 285 50.9
arahy.Tifrunner.gnm1.ann1.1W8L1U Arachis hypogaea HOM05D006533 ORTHO05D008625 1.1e-55 221.5 186 64.0
SEGI_31434 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 1.8e-53 214.2 200 60.5
TPR.G37965 Trifolium pratense HOM05D006533 ORTHO05D008625 1.3e-48 198.0 253 47.4
HPP92_005432 Vanilla planifolia HOM05D006533 ORTHO05D008625 5.3e-37 159.5 174 48.9
CBR_g24301 Chara braunii HOM05D006533 ORTHO05D008625 7.6e-36 155.6 346 34.1
MBI06_g38701_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 2.7e-33 147.1 133 57.9
SEGI_03149 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 9.6e-31 138.7 211 39.3
FAN01G0029 Fragaria x ananassa HOM05D006533 ORTHO05D008625 2.4e-29 134.0 86 75.6
MBI12_g01582_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 6.5e-19 99.4 138 44.2
Hma1.2p1_0649F.1_g195356 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 4.5e-12 76.6 76 61.8
Hma1.2p1_0649F.1_g195390 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 4.5e-12 76.6 76 61.8
Hma1.2p1_3802F.1_g337632 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 4.5e-12 76.6 76 61.8
MBI06_g38702_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 6.5e-11 72.8 98 42.9
MBI05_g26894_MAGBIO Magnolia biondii HOM05D003110 ORTHO05D003585 3.2e-10 70.5 47 72.3
Rhsim12G0119200 Rhododendron simsii HOM05D006533 ORTHO05D338813 5.7e-07 59.7 59 54.2


User provided reference genes

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