Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g01780 Nelumbo nucifera HOM05D004719 ORTHO05D005519 7.0e-119 430.6 218 100.0
Nn7g37372 Nelumbo nucifera HOM05D004719 ORTHO05D005519 3.3e-92 342.0 220 80.9
TAR333G0005 Trochodendron aralioides HOM05D004719 ORTHO05D005519 1.9e-87 326.2 222 76.6
Dinv35299 Davidia involucrata HOM05D004719 ORTHO05D005519 1.2e-83 313.5 220 73.6
vmacro10099 Vaccinium macrocarpon HOM05D004719 ORTHO05D005519 1.1e-82 310.5 223 74.9
Gohir.A11G013800 Gossypium hirsutum HOM05D004719 ORTHO05D005519 6.8e-82 307.8 222 72.5
Duzib084G0320 Durio zibethinus HOM05D004719 ORTHO05D005519 8.9e-82 307.4 225 72.0
TWI23G0029 Tripterygium wilfordii HOM05D004719 ORTHO05D005519 4.4e-81 305.1 219 72.1
TWI14G0874 Tripterygium wilfordii HOM05D004719 ORTHO05D005519 9.9e-81 303.9 219 73.1
Gohir.D11G014000 Gossypium hirsutum HOM05D004719 ORTHO05D005519 2.2e-80 302.8 222 72.1
Gorai.007G014400 Gossypium raimondii HOM05D004719 ORTHO05D005519 2.2e-80 302.8 223 72.6
Thecc.03G191400 Theobroma cacao HOM05D004719 ORTHO05D005519 8.4e-80 300.8 226 71.7
PSO170G2586 Papaver somniferum HOM05D004719 ORTHO05D005519 1.1e-79 300.4 220 71.4
CSS0006896 Camellia sinensis var. sinensis HOM05D004719 ORTHO05D005519 1.4e-79 300.1 226 71.7
CSS0042605 Camellia sinensis var. sinensis HOM05D004719 ORTHO05D005519 1.4e-79 300.1 226 71.7
PSO063G4149 Papaver somniferum HOM05D004719 ORTHO05D005519 4.1e-79 298.5 220 70.9
TAR374G0131 Trochodendron aralioides HOM05D004719 ORTHO05D005519 4.1e-79 298.5 220 72.7
Duzib068G0142 Durio zibethinus HOM05D004719 ORTHO05D005519 2.1e-78 296.2 222 70.3
Duzib205G0172 Durio zibethinus HOM05D004719 ORTHO05D005519 6.0e-78 294.7 224 67.0
TWI39G0409 Tripterygium wilfordii HOM05D004719 ORTHO05D005519 2.3e-77 292.7 219 70.8
Hma1.2p1_0327F.1_g126670 Hydrangea macrophylla HOM05D004719 ORTHO05D005519 1.9e-76 289.7 219 70.3
Hma1.2p1_1891F.1_g306690 Hydrangea macrophylla HOM05D004719 ORTHO05D005519 7.3e-76 287.7 219 69.9
Hma1.2p1_0142F.1_g064100 Hydrangea macrophylla HOM05D004719 ORTHO05D005519 1.4e-74 283.5 237 65.0
Rhsim09G0203300 Rhododendron simsii HOM05D004719 ORTHO05D005519 4.0e-74 282.0 242 66.9
Prupe.2G306000 Prunus persica HOM05D004719 ORTHO05D005519 5.2e-74 281.6 230 65.7
Manes.06G156000 Manihot esculenta HOM05D004719 ORTHO05D005519 7.6e-73 277.7 204 70.6
Cfa016352 Carpinus fangiana HOM05D004719 ORTHO05D005519 1.7e-72 276.6 232 67.2
Cpa.g.sc3.37 Carica papaya HOM05D004719 ORTHO05D005519 1.4e-71 273.5 226 64.6
Potri.012G033300 Populus trichocarpa HOM05D004719 ORTHO05D005519 9.3e-71 270.8 221 65.2
Actinidia31859 Actinidia chinensis HOM05D004719 ORTHO05D005519 2.7e-70 269.2 223 70.0
MD07G1283600 Malus domestica HOM05D004719 ORTHO05D005519 2.7e-70 269.2 233 63.9
CiPaw.06G006600 Carya illinoinensis HOM05D004719 ORTHO05D005519 6.0e-70 268.1 209 67.9
Cc02_g02010 Coffea canephora HOM05D004719 ORTHO05D005519 6.6e-69 264.6 223 66.8
AUR62021055 Chenopodium quinoa HOM05D004719 ORTHO05D005519 1.1e-68 263.8 225 65.8
Haze_00101 Corylus avellana HOM05D004719 ORTHO05D005519 1.5e-68 263.5 239 64.0
AUR62031477 Chenopodium quinoa HOM05D004719 ORTHO05D005519 2.5e-68 262.7 225 65.3
Atru.chr1.287 Acer truncatum HOM05D004719 ORTHO05D005519 2.1e-67 259.6 230 62.2
CsaV3_5G000780 Cucumis sativus L. HOM05D004719 ORTHO05D005519 2.8e-67 259.2 226 62.4
Ciclev10005830m.g Citrus clementina HOM05D004719 ORTHO05D005519 3.6e-67 258.8 230 62.6
QL09p011210 Quercus lobata HOM05D004719 ORTHO05D005519 3.6e-67 258.8 228 63.6
MELO3C005862.2 Cucumis melo HOM05D004719 ORTHO05D005519 4.8e-67 258.5 226 63.3
Aqoxy5G04028 Aquilegia oxysepala HOM05D004719 ORTHO05D005519 1.1e-66 257.3 223 63.7
EL10Ac3g05361 Beta vulgaris HOM05D004719 ORTHO05D005519 1.1e-66 257.3 223 62.3
ClCG01G000680 Citrullus lanatus HOM05D004719 ORTHO05D005519 3.1e-66 255.8 252 57.5
Ah.07g206120 Amaranthus hybridus HOM05D004719 ORTHO05D005519 9.9e-65 250.8 225 62.7
SalBow4G0130 Salvia bowleyana HOM05D004719 ORTHO05D005519 2.2e-64 249.6 227 58.6
Potri.015G023600 Populus trichocarpa HOM05D004719 ORTHO05D005519 1.1e-63 247.3 224 60.7
SalBow4G0254 Salvia bowleyana HOM05D004719 ORTHO05D005519 1.9e-63 246.5 227 58.1
Sed0016292 Sechium edule HOM05D004719 ORTHO05D005519 2.4e-63 246.1 219 60.3
THA.LOC104800282 Tarenaya hassleriana HOM05D004719 ORTHO05D005519 4.2e-63 245.4 225 57.8
Lsat_1_v5_gn_2_134381 Lactuca sativa HOM05D004719 ORTHO05D005519 1.6e-62 243.4 219 62.6
Gohir.D09G178000 Gossypium hirsutum HOM05D004719 ORTHO05D005519 2.7e-62 242.7 202 64.4
MD01G1213900 Malus domestica HOM05D004719 ORTHO05D005519 2.7e-62 242.7 235 60.0
Manes.14G019414 Manihot esculenta HOM05D004719 ORTHO05D005519 2.7e-62 242.7 177 72.9
MSTRG.8686 Avicennia marina HOM05D004719 ORTHO05D005519 6.0e-62 241.5 227 59.5
Migut.F00251 Erythranthe guttata HOM05D004719 ORTHO05D005519 6.0e-62 241.5 225 58.7
PGSC0003DMG400009067 Solanum tuberosum HOM05D004719 ORTHO05D005519 1.3e-61 240.4 228 60.1
Gohir.A09G183300 Gossypium hirsutum HOM05D004719 ORTHO05D005519 1.8e-61 240.0 201 63.7
Sed0024250 Sechium edule HOM05D004719 ORTHO05D005519 2.3e-61 239.6 224 58.5
COL.COLO4_08254 Corchorus olitorius HOM05D004719 ORTHO05D005519 3.0e-61 239.2 155 78.7
Gorai.006G200100 Gossypium raimondii HOM05D004719 ORTHO05D005519 3.0e-61 239.2 202 63.9
Oeu009271.1 Olea europaea HOM05D004719 ORTHO05D005519 5.1e-61 238.4 231 60.2
DCAR_020296 Daucus carota HOM05D004719 ORTHO05D005519 1.1e-60 237.3 210 63.3
Nitab4.5_0001331g0150 Nicotiana tabacum HOM05D004719 ORTHO05D005519 1.5e-60 236.9 227 59.9
SGA_v2.0_scaffold192G40593 Striga asiatica HOM05D004719 ORTHO05D005519 1.9e-60 236.5 229 58.1
Oeu049096.1 Olea europaea HOM05D004719 ORTHO05D005519 4.3e-60 235.3 224 59.4
Nitab4.5_0000472g0190 Nicotiana tabacum HOM05D004719 ORTHO05D005519 5.6e-60 235.0 227 59.0
Lj1g0014949 Lotus japonicus HOM05D004719 ORTHO05D005519 1.6e-59 233.4 225 59.6
THA.LOC104811935 Tarenaya hassleriana HOM05D004719 ORTHO05D005519 2.8e-59 232.6 227 56.8
Solyc03g007520.3 Solanum lycopersicum HOM05D004719 ORTHO05D005519 4.8e-59 231.9 220 59.5
Sopen03g003480 Solanum pennellii HOM05D004719 ORTHO05D005519 1.1e-58 230.7 220 59.1
CANSAT21G2536 Cannabis sativa HOM05D004719 ORTHO05D005519 1.4e-58 230.3 229 60.3
HanXRQChr14g0462731 Helianthus annuus HOM05D004719 ORTHO05D005519 2.4e-58 229.6 223 58.3
arahy.Tifrunner.gnm1.ann1.A0EQPQ Arachis hypogaea HOM05D004719 ORTHO05D005519 3.1e-58 229.2 210 63.3
PGSC0003DMG400028901 Solanum tuberosum HOM05D004719 ORTHO05D005519 5.3e-58 228.4 225 59.6
Phvul.008G159900 Phaseolus vulgaris HOM05D004719 ORTHO05D005519 6.9e-58 228.0 219 60.7
ATR0661G055 Amborella trichopoda HOM05D004719 ORTHO05D005519 1.2e-57 227.3 219 60.7
FAN03G2418 Fragaria x ananassa HOM05D004719 ORTHO05D005519 1.5e-57 226.9 237 56.1
HPP92_008641 Vanilla planifolia HOM05D004719 ORTHO05D005519 2.0e-57 226.5 235 53.2
Sp6g15480 Schrenkiella parvula HOM05D004719 ORTHO05D005519 2.6e-57 226.1 231 55.8
Sc13g0009490 Simmondsia chinensis HOM05D004719 ORTHO05D005519 2.6e-57 226.1 151 76.2
Thhalv10014603m.g Eutrema salsugineum HOM05D004719 ORTHO05D005519 3.4e-57 225.7 229 55.5
FAN10G3127 Fragaria x ananassa HOM05D004719 ORTHO05D005519 3.4e-57 225.7 236 55.9
PGR142G1718 Punica granatum HOM05D004719 ORTHO05D005519 3.4e-57 225.7 224 58.0
Aa31LG3G9210 Aethionema arabicum HOM05D004719 ORTHO05D005519 1.3e-56 223.8 227 55.1
FvH4_7g30890 Fragaria vesca HOM05D004719 ORTHO05D005519 1.3e-56 223.8 234 56.8
unitig_747.g21854 Utricularia gibba HOM05D004719 ORTHO05D005519 1.3e-56 223.8 221 57.0
Peaxi162Scf00904g00473 Petunia axillaris HOM05D004719 ORTHO05D005519 1.7e-56 223.4 223 57.8
Eucgr.A02672 Eucalyptus grandis HOM05D004719 ORTHO05D005519 2.2e-56 223.0 184 62.5
FAN01G1522 Fragaria x ananassa HOM05D004719 ORTHO05D005519 2.9e-56 222.6 242 54.5
FAN06G4721 Fragaria x ananassa HOM05D004719 ORTHO05D005519 2.9e-56 222.6 232 56.5
AL8G28040 Arabidopsis lyrata HOM05D004719 ORTHO05D005519 6.4e-56 221.5 221 55.2
RcHm_v2.0_Chr1g0379961 Rosa chinensis HOM05D004719 ORTHO05D005519 1.1e-55 220.7 240 55.4
MBI06_g04286_MAGBIO Magnolia biondii HOM05D004719 ORTHO05D005519 2.4e-55 219.5 222 58.1
arahy.Tifrunner.gnm1.ann1.YXX8CM Arachis hypogaea HOM05D004719 ORTHO05D005519 5.5e-55 218.4 205 62.0
ECA238G1719 Erigeron canadensis HOM05D000316 ORTHO05D001978 7.1e-55 218.0 206 58.3
Lalb_Chr23g0271411 Lupinus albus HOM05D004719 ORTHO05D005519 7.1e-55 218.0 228 54.4
HanXRQChr07g0207131 Helianthus annuus HOM05D004719 ORTHO05D005519 9.3e-55 217.6 217 57.6
PGR042G1451 Punica granatum HOM05D004719 ORTHO05D005519 2.1e-54 216.5 219 56.6
Glyma.04G239200 Glycine max HOM05D004719 ORTHO05D005519 1.0e-53 214.2 218 54.1
Glyma.06G124600 Glycine max HOM05D004719 ORTHO05D005519 3.9e-53 212.2 221 54.8
BraA03t10813Z Brassica rapa HOM05D004719 ORTHO05D005519 5.1e-53 211.8 224 54.0
A03p15190 Brassica napus HOM05D004719 ORTHO05D005519 1.1e-52 210.7 224 53.6
BcaNung06632 Brassica carinata HOM05D004719 ORTHO05D005519 4.3e-52 208.8 221 54.3
C03p17720 Brassica napus HOM05D004719 ORTHO05D005519 4.3e-52 208.8 221 54.3
CAN.G204.6 Capsicum annuum HOM05D004719 ORTHO05D005519 4.3e-52 208.8 217 53.9
Carub.0008s1351 Capsella rubella HOM05D004719 ORTHO05D005519 5.6e-52 208.4 232 53.4
Peaxi162Scf00618g00530 Petunia axillaris HOM05D004719 ORTHO05D005519 5.6e-52 208.4 151 72.2
MSTRG.27052 Avicennia marina HOM05D004719 ORTHO05D005519 1.6e-51 206.8 237 49.8
Lj1C1011G7 Lonicera japonica HOM05D004719 ORTHO05D005519 2.1e-51 206.5 132 78.8
CDE08G1019 Ceratophyllum demersum HOM05D004719 ORTHO05D005519 3.7e-51 205.7 223 53.4
Phvul.009G136700 Phaseolus vulgaris HOM05D004719 ORTHO05D005519 8.1e-51 204.5 218 54.1
AT5G53330 Arabidopsis thaliana HOM05D004719 ORTHO05D005519 1.1e-50 204.1 224 53.1
BolC3t14182H Brassica oleracea HOM05D004719 ORTHO05D005519 1.4e-50 203.8 233 52.4
Psat5g080520 Pisum sativum HOM05D004719 ORTHO05D005519 2.4e-50 203.0 204 54.4
Os06g0160400 Oryza sativa ssp. japonica HOM05D004719 ORTHO05D005519 6.9e-50 201.4 239 48.5
CAN.G108.16 Capsicum annuum HOM05D004719 ORTHO05D005519 1.2e-49 200.7 207 53.6
CARHR266390 Cardamine hirsuta HOM05D004719 ORTHO05D005519 1.2e-49 200.7 229 51.1
BcaB08g35695 Brassica carinata HOM05D004719 ORTHO05D005519 6.5e-48 194.9 226 50.0
Actinidia34185 Actinidia chinensis HOM05D004719 ORTHO05D005519 8.4e-48 194.5 144 69.4
Medtr3g090640 Medicago truncatula HOM05D004719 ORTHO05D005519 8.4e-48 194.5 202 54.0
GSVIVG01028725001 Vitis vinifera HOM05D004719 ORTHO05D005519 4.2e-47 192.2 138 70.3
Ca_16667_v3 Cicer arietinum L. HOM05D004719 ORTHO05D005519 5.5e-47 191.8 148 64.2
A10p10840 Brassica napus HOM05D004719 ORTHO05D005519 9.3e-47 191.0 229 48.9
BcaC01g06246 Brassica carinata HOM05D004719 ORTHO05D005519 2.1e-46 189.9 197 54.8
C09p43180 Brassica napus HOM05D004719 ORTHO05D005519 3.5e-46 189.1 228 49.6
BraA10t43168Z Brassica rapa HOM05D004719 ORTHO05D005519 3.5e-46 189.1 232 47.4
BcaC04g20465 Brassica carinata HOM05D004719 ORTHO05D005519 7.9e-46 188.0 228 49.6
VMungo1309G2489 Vigna mungo HOM05D004719 ORTHO05D005519 1.8e-45 186.8 254 45.7
Zm00001eb376120 Zea mays HOM05D004719 ORTHO05D005519 6.7e-45 184.9 252 44.4
BolC9t57191H Brassica oleracea HOM05D004719 ORTHO05D005519 8.7e-45 184.5 232 47.8
PGR142G4196 Punica granatum HOM05D004719 ORTHO05D005519 4.3e-44 182.2 224 50.9
CDE02G1124 Ceratophyllum demersum HOM05D004719 ORTHO05D005519 9.6e-44 181.0 224 48.7
TPR.G33870 Trifolium pratense HOM05D004719 ORTHO05D005519 6.9e-42 174.9 205 51.7
BcaNung07347 Brassica carinata HOM05D004719 ORTHO05D005519 1.4e-39 167.2 163 54.6
FAN06G1194 Fragaria x ananassa HOM05D004719 ORTHO05D005519 6.1e-38 161.8 142 59.9
Mapoly0050s0076 Marchantia polymorpha HOM05D004719 ORTHO05D005519 6.1e-38 161.8 227 45.8
AagrBONN_evm.TU.Sc2ySwM_340.345 Anthoceros agrestis HOM05D004719 ORTHO05D005519 1.6e-35 153.7 219 45.2
VMungo0647G2259 Vigna mungo HOM05D004719 ORTHO05D005519 6.9e-34 148.3 157 51.6
SEGI_18632 Sequoiadendron giganteum HOM05D004719 ORTHO05D005519 5.0e-32 142.1 166 53.0
Pp3c1_11420 Physcomitrium patens HOM05D004719 ORTHO05D005519 7.7e-25 118.2 215 38.6
Dinv28349 Davidia involucrata HOM05D004719 ORTHO05D005519 6.5e-24 115.2 71 80.3
C03p17810 Brassica napus HOM05D004719 ORTHO05D005519 2.6e-20 103.2 189 39.7
BcaC01g06237 Brassica carinata HOM05D001465 ORTHO05D001434 1.3e-19 100.9 158 44.3
QL04p064474 Quercus lobata HOM05D000013 ORTHO05D000011 8.2e-19 98.2 61 78.7
FAN18G3526 Fragaria x ananassa HOM05D006854 ORTHO05D210570 1.8e-18 97.1 74 66.2
Solyc06g036500.1 Solanum lycopersicum HOM05D004719 ORTHO05D005519 4.5e-17 92.4 105 50.5
FvH4_7g16570 Fragaria vesca HOM05D004719 ORTHO05D005519 1.7e-16 90.5 55 74.5
FAN01G1848 Fragaria x ananassa HOM05D002077 ORTHO05D000818 3.8e-16 89.4 53 77.4
BolC3t14188H Brassica oleracea HOM05D004719 ORTHO05D005519 8.0e-14 81.6 88 50.0
Hund30245 Selenicereus undatus HOM05D004719 ORTHO05D005519 2.4e-10 70.1 92 51.1
CDE09G0250 Ceratophyllum demersum HOM05D004719 ORTHO05D005519 4.1e-10 69.3 49 65.3
Sopen06g012490 Solanum pennellii HOM05D004719 ORTHO05D005519 5.3e-10 68.9 138 36.2
CBR_g83324 Chara braunii HOM05D004719 ORTHO05D005519 7.0e-10 68.6 70 47.1
FvH4_6g34200 Fragaria vesca HOM05D004719 ORTHO05D005519 2.0e-09 67.0 65 52.3
FAN16G3662 Fragaria x ananassa HOM05D004719 ORTHO05D005519 5.0e-08 62.4 42 66.7
CBR_g84869 Chara braunii HOM05D004719 ORTHO05D005519 1.5e-07 60.8 96 40.6
MCO03G325 Micromonas commoda HOM05D004719 ORTHO05D005519 1.2e-06 57.8 150 34.0


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