Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g01746 Nelumbo nucifera HOM05D005766 ORTHO05D007002 0.0e+00 1519.2 759 100.0
TAR629G2087 Trochodendron aralioides HOM05D005766 ORTHO05D007002 2.6e-298 1028.5 672 79.0
GSVIVG01028775001 Vitis vinifera HOM05D005766 ORTHO05D007002 8.8e-278 960.3 665 74.0
Cfa016332 Carpinus fangiana HOM05D005766 ORTHO05D007002 3.2e-272 941.8 674 73.0
PSO170G0163 Papaver somniferum HOM05D005766 ORTHO05D007002 9.8e-269 930.2 664 71.7
Prupe.2G304700 Prunus persica HOM05D005766 ORTHO05D007002 4.9e-268 927.9 665 71.4
Rhsim03G0196600 Rhododendron simsii HOM05D005766 ORTHO05D007002 2.5e-264 915.6 692 69.5
CsaV3_3G021770 Cucumis sativus L. HOM05D005766 ORTHO05D007002 6.1e-263 911.0 666 68.9
Hma1.2p1_0327F.1_g126600 Hydrangea macrophylla HOM05D005766 ORTHO05D007002 2.0e-261 906.0 664 69.4
Potri.015G026100 Populus trichocarpa HOM05D005766 ORTHO05D007002 6.6e-257 891.0 665 68.6
Duzib205G0439 Durio zibethinus HOM05D005766 ORTHO05D007002 1.1e-256 890.2 669 69.2
CANSAT21G0601 Cannabis sativa HOM05D005766 ORTHO05D007002 2.5e-256 889.0 665 69.9
Thecc.03G188900 Theobroma cacao HOM05D005766 ORTHO05D007002 7.3e-256 887.5 672 68.9
Manes.14G020100 Manihot esculenta HOM05D005766 ORTHO05D007002 8.0e-255 884.0 640 70.3
Aqoxy5G04049 Aquilegia oxysepala HOM05D005766 ORTHO05D007002 1.8e-254 882.9 666 68.8
MELO3C006963.2 Cucumis melo HOM05D005766 ORTHO05D007002 2.3e-254 882.5 676 67.3
PGR004G1861 Punica granatum HOM05D005766 ORTHO05D007002 2.3e-254 882.5 664 68.7
Gohir.A12G254600 Gossypium hirsutum HOM05D005766 ORTHO05D007002 2.2e-252 875.9 665 69.0
MD07G1282600 Malus domestica HOM05D005766 ORTHO05D007002 4.9e-252 874.8 713 64.9
Gorai.008G272400 Gossypium raimondii HOM05D005766 ORTHO05D007002 3.2e-251 872.1 664 68.7
Gohir.D12G254700 Gossypium hirsutum HOM05D005766 ORTHO05D007002 4.1e-251 871.7 664 68.5
Cc02_g02130 Coffea canephora HOM05D005766 ORTHO05D007002 4.7e-247 858.2 661 66.1
vmacro06594 Vaccinium macrocarpon HOM05D005766 ORTHO05D007002 9.9e-245 850.5 745 62.8
Lj5g0016487 Lotus japonicus HOM05D005766 ORTHO05D007002 1.1e-243 847.0 666 65.9
Phvul.007G077400 Phaseolus vulgaris HOM05D005766 ORTHO05D007002 3.5e-242 842.0 665 66.6
Glyma.20G164300 Glycine max HOM05D005766 ORTHO05D007002 6.0e-242 841.3 671 65.4
MBI07_g26934_MAGBIO Magnolia biondii HOM05D005766 ORTHO05D007002 6.0e-242 841.3 675 67.6
TPR.G7746 Trifolium pratense HOM05D005766 ORTHO05D007002 6.6e-241 837.8 686 65.5
FvH4_7g30700 Fragaria vesca HOM05D005766 ORTHO05D007002 1.5e-240 836.6 631 68.8
ATR1131G022 Amborella trichopoda HOM05D005766 ORTHO05D007002 1.9e-240 836.3 670 64.8
Glyma.10G228700 Glycine max HOM05D005766 ORTHO05D007002 3.1e-238 828.9 669 64.1
Eucgr.K00307 Eucalyptus grandis HOM05D005766 ORTHO05D007002 5.8e-237 824.7 663 64.7
Lsat_1_v5_gn_2_61121 Lactuca sativa HOM05D005766 ORTHO05D007002 5.8e-237 824.7 680 64.4
Sed0015140 Sechium edule HOM05D005766 ORTHO05D007002 4.9e-236 821.6 624 67.0
Ah.07g206240 Amaranthus hybridus HOM05D005766 ORTHO05D007002 7.1e-235 817.8 701 62.1
MD01G1212200 Malus domestica HOM05D005766 ORTHO05D007002 4.6e-234 815.1 658 63.2
ClCG05G008560 Citrullus lanatus HOM05D005766 ORTHO05D007002 8.7e-233 810.8 661 63.7
Migut.F00259 Erythranthe guttata HOM05D005766 ORTHO05D007002 2.2e-228 796.2 664 61.9
Haze_00083 Corylus avellana HOM05D005766 ORTHO05D007002 2.1e-226 789.6 773 58.5
Ca_10701_v3 Cicer arietinum L. HOM05D005766 ORTHO05D007002 4.3e-224 781.9 662 62.7
Lj1A1010T47 Lonicera japonica HOM05D005766 ORTHO05D007002 1.1e-222 777.3 671 63.2
arahy.Tifrunner.gnm1.ann1.M1FPNI Arachis hypogaea HOM05D005766 ORTHO05D007002 7.6e-221 771.2 636 63.2
CiPaw.05G259700 Carya illinoinensis HOM05D005766 ORTHO05D007002 1.5e-216 756.9 553 70.2
Sabra15G0019200 Salix brachista HOM05D005766 ORTHO05D007002 2.1e-215 753.1 693 59.3
arahy.Tifrunner.gnm1.ann1.8957SA Arachis hypogaea HOM05D005766 ORTHO05D007002 4.3e-208 728.8 673 59.1
ECA238G0894 Erigeron canadensis HOM05D005766 ORTHO05D000105 1.9e-203 713.4 572 63.5
SalBow4G0986 Salvia bowleyana HOM05D005766 ORTHO05D007002 6.0e-202 708.4 663 56.9
Dinv28359 Davidia involucrata HOM05D005766 ORTHO05D007002 7.9e-202 708.0 561 67.0
TWI39G0494 Tripterygium wilfordii HOM05D005766 ORTHO05D007002 8.7e-201 704.5 668 59.4
Hund04814 Selenicereus undatus HOM05D005766 ORTHO05D007002 3.3e-200 702.6 664 59.0
FAN06G2288 Fragaria x ananassa HOM05D005766 ORTHO05D007002 4.3e-200 702.2 672 58.2
FAN10G0167 Fragaria x ananassa HOM05D005766 ORTHO05D007002 9.0e-198 694.5 697 57.0
FAN10G3945 Fragaria x ananassa HOM05D005766 ORTHO05D007002 1.2e-197 694.1 697 56.8
CSS0041625 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 1.3e-196 690.6 530 67.9
CSS0024367 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 4.2e-195 685.6 531 67.4
FAN03G2278 Fragaria x ananassa HOM05D005766 ORTHO05D007002 2.0e-184 650.2 726 52.9
RcHm_v2.0_Chr1g0379661 Rosa chinensis HOM05D005766 ORTHO05D007002 1.7e-183 647.1 491 70.1
SGA_v2.0_scaffold192G40599 Striga asiatica HOM05D005766 ORTHO05D007002 8.2e-183 644.8 565 61.6
Cpa.g.sc3.14 Carica papaya HOM05D005766 ORTHO05D007002 7.0e-182 641.7 710 53.9
Mapoly0113s0021 Marchantia polymorpha HOM05D005766 ORTHO05D007002 3.2e-179 632.9 666 48.8
Sc13g0009380 Simmondsia chinensis HOM05D005766 ORTHO05D007002 2.3e-169 600.1 490 66.1
Ciclev10004767m.g Citrus clementina HOM05D005766 ORTHO05D007002 1.2e-168 597.8 517 63.1
Lalb_Chr06g0161411 Lupinus albus HOM05D005766 ORTHO05D007002 5.7e-168 595.5 498 64.5
Medtr1g099380 Medicago truncatula HOM05D005766 ORTHO05D007002 2.8e-167 593.2 478 66.9
Sopen12g011340 Solanum pennellii HOM05D005766 ORTHO05D007002 4.8e-167 592.4 480 66.0
HanXRQChr14g0440231 Helianthus annuus HOM05D005766 ORTHO05D007002 3.1e-166 589.7 333 83.5
HPP92_022503 Vanilla planifolia HOM05D005766 ORTHO05D007002 3.1e-166 589.7 489 64.4
Oeu003335.2 Olea europaea HOM05D005766 ORTHO05D007002 3.5e-165 586.3 474 64.8
Peaxi162Scf00023g00720 Petunia axillaris HOM05D005766 ORTHO05D007002 3.6e-162 576.2 555 58.6
Psat6g194920 Pisum sativum HOM05D005766 ORTHO05D007002 2.0e-160 570.5 338 80.5
QL11p056564 Quercus lobata HOM05D005766 ORTHO05D007002 1.8e-158 563.9 417 70.0
Atru.chr1.315 Acer truncatum HOM05D005766 ORTHO05D007002 5.4e-158 562.4 454 66.5
EL10Ac3g05375 Beta vulgaris HOM05D005766 ORTHO05D007002 9.5e-155 551.6 482 61.6
FAN06G1885 Fragaria x ananassa HOM05D005766 ORTHO05D007002 1.1e-150 538.1 473 62.4
FAN01G0765 Fragaria x ananassa HOM05D005766 ORTHO05D007002 6.6e-148 528.9 473 61.7
Sabra15G0021700 Salix brachista HOM05D005766 ORTHO05D007002 7.3e-147 525.4 554 54.0
CDE02G1402 Ceratophyllum demersum HOM05D001977 ORTHO05D002246 4.9e-143 512.7 374 68.4
AagrBONN_evm.TU.Sc2ySwM_344.4899 Anthoceros agrestis HOM05D005766 ORTHO05D007002 1.0e-140 505.0 664 43.5
SEGI_39054 Sequoiadendron giganteum HOM05D005766 ORTHO05D007002 8.0e-138 495.4 463 57.5
unitig_37.g11976 Utricularia gibba HOM05D005766 ORTHO05D007002 9.5e-131 471.9 665 42.9
SMO203G0206 Selaginella moellendorffii HOM05D005766 ORTHO05D007002 4.7e-130 469.5 663 40.7
Glyma.09G181880 Glycine max HOM05D005766 ORTHO05D007002 2.2e-119 434.1 244 84.0
Nitab4.5_0014657g0010 Nicotiana tabacum HOM05D005766 ORTHO05D007002 2.8e-98 364.0 257 70.0
Atru.chr1.316 Acer truncatum HOM05D005766 ORTHO05D007002 1.2e-80 305.4 174 82.8
QL09p011984 Quercus lobata HOM05D005766 ORTHO05D007002 4.5e-80 303.5 286 60.5
QL11p056568 Quercus lobata HOM05D005766 ORTHO05D007002 3.9e-76 290.4 174 78.2
RcHm_v2.0_Chr1g0379651 Rosa chinensis HOM05D005766 ORTHO05D007002 5.1e-76 290.0 177 76.8
TWI39G0059 Tripterygium wilfordii HOM05D005766 ORTHO05D007002 8.8e-76 289.3 168 81.5
Actinidia08607 Actinidia chinensis HOM05D005766 ORTHO05D007002 1.0e-71 275.8 155 84.5
Zm00001eb221900 Zea mays HOM05D005766 ORTHO05D007002 6.5e-71 273.1 348 46.8
Nitab4.5_0000157g0190 Nicotiana tabacum HOM05D005766 ORTHO05D007002 4.2e-70 270.4 307 55.0
Sc13g0009390 Simmondsia chinensis HOM05D005766 ORTHO05D007002 3.6e-69 267.3 174 73.6
Psat6g194960 Pisum sativum HOM05D000038 ORTHO05D007763 5.1e-68 263.5 175 72.0
CBR_g23333 Chara braunii HOM05D005766 ORTHO05D007002 2.2e-66 258.1 374 41.7
HanXRQChr14g0440221 Helianthus annuus HOM05D005766 ORTHO05D007002 1.2e-64 252.3 174 69.0
DCAR_008901 Daucus carota HOM05D000149 ORTHO05D000076 2.6e-64 251.1 615 31.9
Solyc12g021310.3 Solanum lycopersicum HOM05D005766 ORTHO05D007002 4.5e-64 250.4 174 66.7
Nitab4.5_0001504g0110 Nicotiana tabacum HOM05D005766 ORTHO05D007002 1.7e-63 248.4 179 68.2
PGSC0003DMG400006615 Solanum tuberosum HOM05D005766 ORTHO05D007002 2.2e-63 248.1 174 66.7
Sopen12g011330 Solanum pennellii HOM05D005766 ORTHO05D007002 1.1e-62 245.7 174 64.9
Medtr1g099390 Medicago truncatula HOM05D005766 ORTHO05D007002 2.7e-61 241.1 176 65.3
Lalb_Chr06g0161401 Lupinus albus HOM05D005766 ORTHO05D007002 2.0e-59 235.0 174 62.6
Glyma.12G172150 Glycine max HOM05D005766 ORTHO05D007002 3.7e-58 230.7 131 84.0
Actinidia08606 Actinidia chinensis HOM05D005766 ORTHO05D007002 5.0e-55 220.3 255 52.9
Glyma.03G072901 Glycine max HOM05D005766 ORTHO05D007002 1.3e-50 205.7 115 81.7
AUR62031455 Chenopodium quinoa HOM05D000038 ORTHO05D007763 1.8e-49 201.8 133 74.4
Glyma.16G148650 Glycine max HOM05D005766 ORTHO05D007002 2.4e-49 201.4 102 90.2
Glyma.18G131400 Glycine max HOM05D005766 ORTHO05D007002 1.2e-48 199.1 174 57.5
QL09p011987 Quercus lobata HOM05D005766 ORTHO05D007002 1.2e-48 199.1 174 58.0
AUR62021076 Chenopodium quinoa HOM05D005766 ORTHO05D007002 1.6e-48 198.7 133 73.7
Glyma.10G228301 Glycine max HOM05D005766 ORTHO05D007002 2.0e-48 198.4 100 91.0
Os05g0299300 Oryza sativa ssp. japonica HOM05D005766 ORTHO05D007002 1.0e-47 196.1 130 70.8
CAN.G71.5 Capsicum annuum HOM05D005766 ORTHO05D007002 8.8e-44 183.0 130 68.5
PRCOL_00006853 Prasinoderma coloniale HOM05D005766 ORTHO05D007002 1.8e-41 175.3 873 23.4
QL09p011981 Quercus lobata HOM05D005766 ORTHO05D007002 5.0e-39 167.2 100 77.0
Nitab4.5_0000327g0060 Nicotiana tabacum HOM05D005766 ORTHO05D007002 2.3e-36 158.3 90 82.2
Duzib084G0599 Durio zibethinus HOM05D005766 ORTHO05D007002 1.7e-34 152.1 114 70.2
arahy.Tifrunner.gnm1.ann1.DV56VC Arachis hypogaea HOM05D005766 ORTHO05D007002 7.0e-33 146.7 137 51.1
CSS0010184 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 3.4e-27 127.9 78 76.9
COL.COLO4_30253 Corchorus olitorius HOM05D005766 ORTHO05D007002 1.9e-25 122.1 217 44.2
Cre01.g002700 Chlamydomonas reinhardtii HOM05D005766 ORTHO05D007002 1.6e-24 119.0 168 35.1
Cfa000854 Carpinus fangiana HOM05D005766 ORTHO05D007002 1.0e-23 116.3 77 71.4
Actinidia08608 Actinidia chinensis HOM05D005766 ORTHO05D007002 3.9e-23 114.4 68 77.9
CSS0002634 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 4.3e-22 110.9 65 80.0
arahy.Tifrunner.gnm1.ann1.XWQU4Z Arachis hypogaea HOM05D005766 ORTHO05D007002 4.4e-19 100.9 69 62.3
TPR.G27363 Trifolium pratense HOM05D005766 ORTHO05D007002 1.6e-16 92.4 58 69.0
arahy.Tifrunner.gnm1.ann1.118EZC Arachis hypogaea HOM05D005766 ORTHO05D007002 2.8e-13 81.6 56 64.3
Peaxi162Scf00603g00414 Petunia axillaris HOM05D007579 ORTHO05D000285 5.2e-12 77.4 60 63.3
arahy.Tifrunner.gnm1.ann1.AW6XP7 Arachis hypogaea HOM05D005766 ORTHO05D007002 1.3e-10 72.8 51 56.9
Oeu023563.1 Olea europaea HOM05D005766 ORTHO05D007002 4.1e-09 67.8 88 44.3
Actinidia30118 Actinidia chinensis HOM05D006183 ORTHO05D007844 1.6e-08 65.9 241 24.1
Lj1g0002370 Lotus japonicus HOM05D006183 ORTHO05D007844 7.8e-08 63.5 248 24.2
MSTRG.18360 Avicennia marina HOM05D006183 ORTHO05D007844 1.0e-07 63.2 340 22.6
Glyma.08G028700 Glycine max HOM05D005766 ORTHO05D007002 1.0e-07 63.2 41 68.3
AagrBONN_evm.TU.Sc2ySwM_228.230 Anthoceros agrestis HOM05D006183 ORTHO05D007844 1.3e-07 62.8 381 22.8
Oeu044897.1 Olea europaea HOM05D005766 ORTHO05D007002 2.3e-07 62.0 88 40.9
ATR0751G065 Amborella trichopoda HOM05D006183 ORTHO05D007844 3.0e-07 61.6 243 25.5
Oeu016993.1 Olea europaea HOM05D005766 ORTHO05D007002 3.0e-07 61.6 88 40.9
DCAR_018527 Daucus carota HOM05D006183 ORTHO05D007844 3.9e-07 61.2 241 26.1
ECA233G2827 Erigeron canadensis HOM05D000836 ORTHO05D000709 3.9e-07 61.2 224 24.6
GSVIVG01035793001 Vitis vinifera HOM05D000836 ORTHO05D000709 3.9e-07 61.2 234 24.4
arahy.Tifrunner.gnm1.ann1.DC2VU6 Arachis hypogaea HOM05D000702 ORTHO05D007002 5.1e-07 60.8 129 35.7
Oeu049881.1 Olea europaea HOM05D005766 ORTHO05D007002 5.1e-07 60.8 57 50.9
Psat6g188560 Pisum sativum HOM05D000168 ORTHO05D004803 8.6e-07 60.1 233 21.9
CDE02G0751 Ceratophyllum demersum HOM05D006183 ORTHO05D007844 1.1e-06 59.7 265 24.5
Migut.A00286 Erythranthe guttata HOM05D000836 ORTHO05D000709 1.1e-06 59.7 222 23.9
arahy.Tifrunner.gnm1.ann1.3HS4ZY Arachis hypogaea HOM05D005766 ORTHO05D007002 1.5e-06 59.3 40 72.5
Cpa.g.sc87.44 Carica papaya HOM05D006183 ORTHO05D007844 1.5e-06 59.3 346 21.4
Gohir.A07G203800 Gossypium hirsutum HOM05D006183 ORTHO05D007844 1.5e-06 59.3 256 23.0
Gohir.D07G209800 Gossypium hirsutum HOM05D006183 ORTHO05D007844 1.9e-06 58.9 260 23.1
Os10g0464100 Oryza sativa ssp. japonica HOM05D006183 ORTHO05D007844 1.9e-06 58.9 285 22.1
Hund16370 Selenicereus undatus HOM05D002634 ORTHO05D003100 1.9e-06 58.9 143 30.8
GSVIVG01035791001 Vitis vinifera HOM05D000836 ORTHO05D000709 1.9e-06 58.9 234 23.5
Haze_24717 Corylus avellana HOM05D006183 ORTHO05D007844 2.5e-06 58.5 247 23.5
Gorai.001G237200 Gossypium raimondii HOM05D006183 ORTHO05D007844 2.5e-06 58.5 264 23.5
Phvul.001G166600 Phaseolus vulgaris HOM05D006183 ORTHO05D007844 2.5e-06 58.5 348 21.6
SEGI_26680 Sequoiadendron giganteum HOM05D006183 ORTHO05D007844 2.5e-06 58.5 268 22.8
SEGI_33423 Sequoiadendron giganteum HOM05D006183 ORTHO05D007844 2.5e-06 58.5 268 22.8
PGSC0003DMG400014711 Solanum tuberosum HOM05D006183 ORTHO05D007844 2.5e-06 58.5 340 22.4
CSS0038194 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 3.3e-06 58.2 38 71.1
FAN24G1350 Fragaria x ananassa HOM05D000836 ORTHO05D000709 3.3e-06 58.2 223 22.9
Thecc.03G126600 Theobroma cacao HOM05D002332 ORTHO05D002509 3.3e-06 58.2 243 23.0
TWI39G1032 Tripterygium wilfordii HOM05D002332 ORTHO05D002509 3.3e-06 58.2 192 24.0
Dinv19261 Davidia involucrata HOM05D006183 ORTHO05D007844 4.3e-06 57.8 263 22.1
Duzib133G1169 Durio zibethinus HOM05D006183 ORTHO05D007844 4.3e-06 57.8 256 23.0
MBI10_g16795_MAGBIO Magnolia biondii HOM05D006183 ORTHO05D007844 4.3e-06 57.8 241 23.2
QL09p042323 Quercus lobata HOM05D006183 ORTHO05D007844 4.3e-06 57.8 273 23.1
SalBow4G2250 Salvia bowleyana HOM05D000836 ORTHO05D000709 4.3e-06 57.8 234 23.5
GSVIVG01028442001 Vitis vinifera HOM05D006183 ORTHO05D007844 4.3e-06 57.8 246 23.2
CSS0045499 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 5.6e-06 57.4 38 71.1
AUR62038259 Chenopodium quinoa HOM05D002634 ORTHO05D003100 5.6e-06 57.4 270 24.1
Gohir.D13G210800 Gossypium hirsutum HOM05D000836 ORTHO05D000709 5.6e-06 57.4 229 23.1
Lj1A75T44 Lonicera japonica HOM05D006183 ORTHO05D007844 5.6e-06 57.4 266 22.9
Zm00001eb222270 Zea mays HOM05D006183 ORTHO05D007844 5.6e-06 57.4 296 24.0
Haze_07236 Corylus avellana HOM05D002332 ORTHO05D002509 7.3e-06 57.0 249 26.9
ECA246G4130 Erigeron canadensis HOM05D000836 ORTHO05D000709 7.3e-06 57.0 227 24.2
Lj8A611G44 Lonicera japonica HOM05D000836 ORTHO05D000709 7.3e-06 57.0 180 25.6
Medtr1g097140 Medicago truncatula HOM05D003913 ORTHO05D004803 7.3e-06 57.0 226 22.1
RcHm_v2.0_Chr7g0190461 Rosa chinensis HOM05D002332 ORTHO05D002509 7.3e-06 57.0 160 28.1
CSS0035002 Camellia sinensis var. sinensis HOM05D000836 ORTHO05D000709 9.6e-06 56.6 240 22.5
Cfa002493 Carpinus fangiana HOM05D006183 ORTHO05D007844 9.6e-06 56.6 247 23.5
Hma1.2p1_0175F.1_g077110 Hydrangea macrophylla HOM05D000836 ORTHO05D000709 9.6e-06 56.6 212 24.1
Lj1A75T45 Lonicera japonica HOM05D006183 ORTHO05D007844 9.6e-06 56.6 261 21.8
Nitab4.5_0002890g0020 Nicotiana tabacum HOM05D003913 ORTHO05D004803 9.6e-06 56.6 233 21.9


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