Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g01122 Nelumbo nucifera HOM05D004324 ORTHO05D004840 1.1e-209 733.0 366 100.0
GSVIVG01027662001 Vitis vinifera HOM05D004324 ORTHO05D004840 7.5e-182 640.6 339 92.6
TAR375G0703 Trochodendron aralioides HOM05D004324 ORTHO05D004840 1.1e-180 636.7 339 92.3
Manes.05G047100 Manihot esculenta HOM05D004324 ORTHO05D004840 9.1e-180 633.6 335 93.7
Hma1.2p1_0442F.1_g153860 Hydrangea macrophylla HOM05D004324 ORTHO05D004840 1.6e-179 632.9 337 92.0
Cpa.g.sc145.18 Carica papaya HOM05D004324 ORTHO05D004840 7.7e-179 630.6 339 91.7
Manes.01G267300 Manihot esculenta HOM05D004324 ORTHO05D004840 7.7e-179 630.6 335 92.5
Aqoxy7G00682 Aquilegia oxysepala HOM05D004324 ORTHO05D004840 1.0e-178 630.2 342 91.5
Ciclev10021006m.g Citrus clementina HOM05D004324 ORTHO05D004840 1.0e-178 630.2 335 92.5
EL10Ac1g00868 Beta vulgaris HOM05D004324 ORTHO05D004840 2.2e-178 629.0 339 92.6
Cc02_g24110 Coffea canephora HOM05D004324 ORTHO05D004840 5.0e-178 627.9 339 91.7
MD07G1119200 Malus domestica HOM05D004324 ORTHO05D004840 6.5e-178 627.5 335 92.5
PSO782G5694 Papaver somniferum HOM05D004324 ORTHO05D004840 8.5e-178 627.1 339 91.7
Actinidia12245 Actinidia chinensis HOM05D004324 ORTHO05D004840 1.1e-177 626.7 339 91.4
Nitab4.5_0000457g0100 Nicotiana tabacum HOM05D004324 ORTHO05D004840 1.1e-177 626.7 339 90.9
TWI59G0845 Tripterygium wilfordii HOM05D004324 ORTHO05D004840 3.2e-177 625.2 335 91.9
RcHm_v2.0_Chr1g0349771 Rosa chinensis HOM05D004324 ORTHO05D004840 5.5e-177 624.4 335 91.9
THA.LOC104826515 Tarenaya hassleriana HOM05D004324 ORTHO05D004840 5.5e-177 624.4 335 92.8
Dinv32365 Davidia involucrata HOM05D004324 ORTHO05D004840 7.2e-177 624.0 335 92.2
vmacro13417 Vaccinium macrocarpon HOM05D004324 ORTHO05D004840 7.2e-177 624.0 339 90.0
Thecc.08G173500 Theobroma cacao HOM05D004324 ORTHO05D004840 9.4e-177 623.6 333 92.8
Sc26g0001240 Simmondsia chinensis HOM05D004324 ORTHO05D004840 1.6e-176 622.9 339 91.4
FAN03G2758 Fragaria x ananassa HOM05D004324 ORTHO05D004840 2.1e-176 622.5 334 91.9
FAN06G1729 Fragaria x ananassa HOM05D004324 ORTHO05D004840 2.1e-176 622.5 334 91.9
FAN06G4220 Fragaria x ananassa HOM05D004324 ORTHO05D004840 2.1e-176 622.5 334 91.9
Nitab4.5_0010616g0050 Nicotiana tabacum HOM05D004324 ORTHO05D004840 2.7e-176 622.1 335 91.0
PSO478G0881 Papaver somniferum HOM05D004324 ORTHO05D004840 3.6e-176 621.7 339 91.2
Potri.002G146200 Populus trichocarpa HOM05D004324 ORTHO05D004840 3.6e-176 621.7 335 91.9
Potri.014G067700 Populus trichocarpa HOM05D004324 ORTHO05D004840 6.1e-176 620.9 333 92.2
Atru.chr5.282 Acer truncatum HOM05D004324 ORTHO05D004840 8.0e-176 620.5 335 91.9
FAN01G0081 Fragaria x ananassa HOM05D004324 ORTHO05D004840 1.0e-175 620.2 334 91.6
Peaxi162Scf00013g03018 Petunia axillaris HOM05D004324 ORTHO05D004840 1.0e-175 620.2 339 90.0
Migut.B01616 Erythranthe guttata HOM05D004324 ORTHO05D004840 1.8e-175 619.4 339 89.1
QL08p052832 Quercus lobata HOM05D004324 ORTHO05D004840 1.8e-175 619.4 338 91.1
Gohir.D05G254400 Gossypium hirsutum HOM05D004324 ORTHO05D004840 2.3e-175 619.0 334 91.9
Rhsim07G0029000 Rhododendron simsii HOM05D004324 ORTHO05D004840 2.3e-175 619.0 364 85.2
CiPaw.01G263900 Carya illinoinensis HOM05D004324 ORTHO05D004840 3.0e-175 618.6 339 90.3
Duzib268G1605 Durio zibethinus HOM05D004324 ORTHO05D004840 3.0e-175 618.6 335 91.6
Gorai.009G265900 Gossypium raimondii HOM05D004324 ORTHO05D004840 3.0e-175 618.6 334 91.9
MSTRG.17174 Avicennia marina HOM05D004324 ORTHO05D004840 4.0e-175 618.2 339 88.8
Duzib177G0253 Durio zibethinus HOM05D004324 ORTHO05D004840 4.0e-175 618.2 335 91.3
Solyc01g091160.4 Solanum lycopersicum HOM05D004324 ORTHO05D004840 6.8e-175 617.5 339 89.7
Sopen01g036910 Solanum pennellii HOM05D004324 ORTHO05D004840 6.8e-175 617.5 339 89.7
Aa31LG9G14610 Aethionema arabicum HOM05D004324 ORTHO05D004840 1.2e-174 616.7 341 89.4
PGR042G0702 Punica granatum HOM05D004324 ORTHO05D004840 1.5e-174 616.3 335 90.1
SalBow5G2819 Salvia bowleyana HOM05D004324 ORTHO05D004840 3.4e-174 615.1 339 89.4
COL.COLO4_24610 Corchorus olitorius HOM05D004324 ORTHO05D004840 7.5e-174 614.0 333 91.6
CAN.G388.33 Capsicum annuum HOM05D004324 ORTHO05D004840 9.8e-174 613.6 338 89.1
Prupe.2G142300 Prunus persica HOM05D004324 ORTHO05D004840 9.8e-174 613.6 335 90.1
CANSAT56G0022 Cannabis sativa HOM05D004324 ORTHO05D004840 2.2e-173 612.5 334 90.7
HanXRQChr16g0519961 Helianthus annuus HOM05D004324 ORTHO05D004840 3.7e-173 611.7 335 90.1
CDE04G0300 Ceratophyllum demersum HOM05D004324 ORTHO05D004840 6.3e-173 610.9 327 92.4
Eucgr.E01445 Eucalyptus grandis HOM05D004324 ORTHO05D004840 6.3e-173 610.9 339 89.1
HPP92_007375 Vanilla planifolia HOM05D004324 ORTHO05D004840 6.3e-173 610.9 337 88.4
ECA234G2725 Erigeron canadensis HOM05D004324 ORTHO05D004840 1.8e-172 609.4 339 88.8
Oeu055504.4 Olea europaea HOM05D004324 ORTHO05D004840 3.1e-172 608.6 376 82.2
SGA_v2.0_scaffold153G36989 Striga asiatica HOM05D004324 ORTHO05D004840 4.1e-172 608.2 339 88.2
Lsat_1_v5_gn_4_43080 Lactuca sativa HOM05D004324 ORTHO05D004840 9.1e-172 607.1 339 88.5
Sp6g08900 Schrenkiella parvula HOM05D004324 ORTHO05D004840 2.0e-171 605.9 338 88.5
Thecc.08G173700 Theobroma cacao HOM05D004324 ORTHO05D004840 2.0e-171 605.9 333 88.9
Hund27368 Selenicereus undatus HOM05D004324 ORTHO05D004840 2.7e-171 605.5 342 87.7
Lj3g0015076 Lotus japonicus HOM05D004324 ORTHO05D004840 3.5e-171 605.1 334 88.9
Ca_19938_v3 Cicer arietinum L. HOM05D004324 ORTHO05D004840 2.3e-170 602.4 339 88.2
CsaV3_6G006290 Cucumis sativus L. HOM05D004324 ORTHO05D004840 2.9e-170 602.1 342 88.0
DCAR_008551 Daucus carota HOM05D004324 ORTHO05D004840 2.9e-170 602.1 328 90.5
CARHR259850 Cardamine hirsuta HOM05D004324 ORTHO05D004840 5.0e-170 601.3 338 88.2
TPR.G7599 Trifolium pratense HOM05D004324 ORTHO05D004840 8.6e-170 600.5 339 87.6
ClCG06G000480 Citrullus lanatus HOM05D004324 ORTHO05D004840 1.1e-169 600.1 335 89.0
AT4G08900 Arabidopsis thaliana HOM05D004324 ORTHO05D004840 1.9e-169 599.4 338 88.2
Lalb_Chr12g0208141 Lupinus albus HOM05D004324 ORTHO05D004840 3.3e-169 598.6 339 87.0
AL6G41660 Arabidopsis lyrata HOM05D004324 ORTHO05D004840 4.3e-169 598.2 338 87.9
SHI13535 Sapria himalayana HOM05D004324 ORTHO05D004840 5.6e-169 597.8 334 88.6
AUR62013655 Chenopodium quinoa HOM05D004324 ORTHO05D004840 7.2e-169 597.4 339 85.8
BcaB01g02843 Brassica carinata HOM05D004324 ORTHO05D004840 1.2e-168 596.7 342 86.8
unitig_899.g15094 Utricularia gibba HOM05D004324 ORTHO05D004840 1.2e-168 596.7 328 88.4
ATR0665G432 Amborella trichopoda HOM05D004324 ORTHO05D004840 2.1e-168 595.9 339 87.3
RcHm_v2.0_Chr1g0349751 Rosa chinensis HOM05D004324 ORTHO05D004840 4.7e-168 594.7 334 88.9
A03p28290 Brassica napus HOM05D004324 ORTHO05D004840 6.1e-168 594.3 338 86.7
BraA03t12035Z Brassica rapa HOM05D004324 ORTHO05D004840 1.0e-167 593.6 338 86.7
Carub.0006s2738 Capsella rubella HOM05D004324 ORTHO05D004840 1.0e-167 593.6 338 87.9
C03p34220 Brassica napus HOM05D004324 ORTHO05D004840 1.4e-167 593.2 342 85.7
Os04g0106300 Oryza sativa ssp. japonica HOM05D004324 ORTHO05D004840 2.3e-167 592.4 335 87.2
BcaC01g04748 Brassica carinata HOM05D004324 ORTHO05D004840 3.0e-167 592.0 342 85.7
BolC3t15731H Brassica oleracea HOM05D004324 ORTHO05D004840 3.0e-167 592.0 342 85.4
Sc26g0001250 Simmondsia chinensis HOM05D004324 ORTHO05D004840 6.8e-167 590.9 339 87.0
AUR62004190 Chenopodium quinoa HOM05D004324 ORTHO05D004840 1.5e-166 589.7 339 84.7
Glyma.01G140200 Glycine max HOM05D004324 ORTHO05D004840 3.4e-166 588.6 334 87.4
Sed0016777 Sechium edule HOM05D004324 ORTHO05D004840 3.4e-166 588.6 335 87.5
CSS0002473 Camellia sinensis var. sinensis HOM05D004324 ORTHO05D004840 7.5e-166 587.4 315 92.4
Psat0s3070g0160 Pisum sativum HOM05D004324 ORTHO05D004840 2.9e-165 585.5 339 84.7
Glyma.17G131300 Glycine max HOM05D004324 ORTHO05D004840 3.7e-165 585.1 334 87.4
Phvul.010G081600 Phaseolus vulgaris HOM05D004324 ORTHO05D004840 4.9e-165 584.7 334 86.8
CiPaw.02G169300 Carya illinoinensis HOM05D004324 ORTHO05D004840 1.1e-164 583.6 328 86.3
Thhalv10028793m.g Eutrema salsugineum HOM05D004324 ORTHO05D004840 1.4e-164 583.2 334 87.4
CSS0015452 Camellia sinensis var. sinensis HOM05D004324 ORTHO05D004840 1.8e-164 582.8 339 85.3
CSS0042374 Camellia sinensis var. sinensis HOM05D004324 ORTHO05D004840 1.8e-164 582.8 339 85.3
arahy.Tifrunner.gnm1.ann1.2VF8XD Arachis hypogaea HOM05D004324 ORTHO05D004840 1.2e-163 580.1 372 79.6
Sopen01g036920 Solanum pennellii HOM05D004324 ORTHO05D004840 2.3e-162 575.9 339 84.1
Solyc01g091170.3 Solanum lycopersicum HOM05D004324 ORTHO05D004840 5.0e-162 574.7 339 83.8
AT4G08870 Arabidopsis thaliana HOM05D004324 ORTHO05D004840 8.0e-160 567.4 345 80.6
arahy.Tifrunner.gnm1.ann1.J6F3FE Arachis hypogaea HOM05D004324 ORTHO05D004840 1.8e-159 566.2 394 75.1
Carub.0006s2736 Capsella rubella HOM05D004324 ORTHO05D004840 1.2e-158 563.5 345 79.4
Haze_16793 Corylus avellana HOM05D004324 ORTHO05D004840 2.6e-158 562.4 351 82.1
SEGI_09298 Sequoiadendron giganteum HOM05D004324 ORTHO05D004840 4.9e-157 558.1 339 80.8
Lj3g0002034 Lotus japonicus HOM05D004324 ORTHO05D004840 4.1e-156 555.1 340 79.4
Lj3g0008609 Lotus japonicus HOM05D004324 ORTHO05D004840 7.0e-156 554.3 353 78.2
Medtr4g024960 Medicago truncatula HOM05D004324 ORTHO05D004840 2.5e-153 545.8 339 78.8
Mapoly0082s0038 Marchantia polymorpha HOM05D004324 ORTHO05D004840 7.3e-153 544.3 315 83.8
Lj7A531T56 Lonicera japonica HOM05D004324 ORTHO05D004840 1.2e-152 543.5 339 82.3
Ah.05g174550 Amaranthus hybridus HOM05D004324 ORTHO05D004840 1.4e-151 540.0 334 78.4
TPR.G7597 Trifolium pratense HOM05D004324 ORTHO05D004840 4.4e-150 535.0 343 77.6
Glyma.03G028000 Glycine max HOM05D004324 ORTHO05D004840 2.4e-148 529.3 345 74.5
SMO367G0287 Selaginella moellendorffii HOM05D004324 ORTHO05D004840 9.2e-148 527.3 334 78.1
Lj3g0012371 Lotus japonicus HOM05D004324 ORTHO05D004840 1.6e-147 526.6 339 76.1
Pp3c5_2190 Physcomitrium patens HOM05D004324 ORTHO05D004840 3.4e-142 508.8 313 78.6
HanXRQChr16g0519941 Helianthus annuus HOM05D004324 ORTHO05D004840 1.5e-137 493.4 362 68.5
CBR_g50887 Chara braunii HOM05D004324 ORTHO05D004840 3.5e-131 472.2 322 72.4
Dinv43690 Davidia involucrata HOM05D004324 ORTHO05D004840 5.1e-130 468.4 339 73.2
Psat7g231720 Pisum sativum HOM05D004324 ORTHO05D004840 5.4e-124 448.4 319 68.7
COL.COLO4_24608 Corchorus olitorius HOM05D004324 ORTHO05D004840 2.3e-122 443.0 341 67.4
Sed0023731 Sechium edule HOM05D004324 ORTHO05D004840 4.3e-121 438.7 248 86.7
Atru.chr5.284 Acer truncatum HOM05D004324 ORTHO05D004840 6.9e-119 431.4 246 86.6
MELO3C022492.2 Cucumis melo HOM05D004324 ORTHO05D004840 7.9e-115 417.9 239 85.8
MBI04_g35670_MAGBIO Magnolia biondii HOM05D004324 ORTHO05D004840 5.6e-113 411.8 220 91.4
Hma1.2p1_0375F.1_g138670 Hydrangea macrophylla HOM05D004324 ORTHO05D004840 1.3e-112 410.6 245 84.1
SEGI_04392 Sequoiadendron giganteum HOM05D004324 ORTHO05D004840 1.3e-112 410.6 249 81.5
arahy.Tifrunner.gnm1.ann1.J17N2W Arachis hypogaea HOM05D004324 ORTHO05D004840 2.1e-112 409.8 327 65.7
Medtr4g024940 Medicago truncatula HOM05D004324 ORTHO05D004840 9.0e-111 404.4 234 85.5
FvH4_7g11450 Fragaria vesca HOM05D004324 ORTHO05D004840 2.2e-109 399.8 214 91.1
Zm00001eb418690 Zea mays HOM05D004324 ORTHO05D004840 2.6e-102 376.3 208 88.5
Gohir.A05G252532 Gossypium hirsutum HOM05D004324 ORTHO05D004840 2.8e-96 356.3 188 93.6
Psat6g218040 Pisum sativum HOM05D004324 ORTHO05D004840 9.0e-95 351.3 326 57.1
AagrBONN_evm.TU.Sc2ySwM_368.1743 Anthoceros agrestis HOM05D004324 ORTHO05D004840 3.8e-93 345.9 194 86.1
AL6G42680 Arabidopsis lyrata HOM05D004324 ORTHO05D004840 2.1e-91 340.1 194 85.1
Medtr0088s0100 Medicago truncatula HOM05D004324 ORTHO05D004840 5.7e-89 332.0 332 54.2
SGA_v2.0_scaffold11G05569 Striga asiatica HOM05D004324 ORTHO05D004840 2.8e-80 303.1 242 64.0
Sc26g0001270 Simmondsia chinensis HOM05D004324 ORTHO05D004840 2.0e-78 297.0 171 87.7
Psat6g218080 Pisum sativum HOM05D004324 ORTHO05D004840 2.0e-73 280.4 195 68.2
RcHm_v2.0_Chr1g0349761 Rosa chinensis HOM05D004324 ORTHO05D004840 1.2e-67 261.2 141 90.1
Gohir.A05G252466 Gossypium hirsutum HOM05D004324 ORTHO05D004840 5.4e-63 245.7 135 89.6
AL6G42730 Arabidopsis lyrata HOM05D004324 ORTHO05D004840 1.8e-58 230.7 151 74.2
Psat6g217960 Pisum sativum HOM05D004324 ORTHO05D004840 1.4e-50 204.5 155 65.2
CDE02G4314 Ceratophyllum demersum HOM05D004324 ORTHO05D004840 6.4e-48 195.7 148 71.6
Actinidia02863 Actinidia chinensis HOM05D004324 ORTHO05D004840 1.2e-41 174.9 102 83.3
arahy.Tifrunner.gnm1.ann1.V33WN8 Arachis hypogaea HOM05D004324 ORTHO05D004840 4.9e-40 169.5 87 94.3
MD02G1206600 Malus domestica HOM05D004324 ORTHO05D004840 3.1e-34 150.2 96 77.1
MD02G1206500 Malus domestica HOM05D004324 ORTHO05D004840 1.2e-33 148.3 74 97.3
SEGI_10460 Sequoiadendron giganteum HOM05D004324 ORTHO05D004840 2.6e-33 147.1 123 61.8
Duzib177G0443 Durio zibethinus HOM05D004324 ORTHO05D004840 2.2e-32 144.1 85 84.7
CAN.G112.16 Capsicum annuum HOM05D004324 ORTHO05D004840 2.9e-32 143.7 87 80.5
CAN.G23.23 Capsicum annuum HOM05D004324 ORTHO05D004840 1.7e-29 134.4 78 79.5
Duzib106G1980 Durio zibethinus HOM05D004324 ORTHO05D004840 3.3e-28 130.2 126 56.3
Actinidia02867 Actinidia chinensis HOM05D004324 ORTHO05D004840 2.0e-25 120.9 108 60.2
Actinidia31395 Actinidia chinensis HOM05D004324 ORTHO05D004840 1.9e-23 114.4 77 74.0
Sc26g0001260 Simmondsia chinensis HOM05D004324 ORTHO05D004840 5.4e-23 112.8 127 54.3
Prupe.7G087800 Prunus persica HOM05D004324 ORTHO05D004840 1.3e-21 108.2 124 55.6
MCO07G634 Micromonas commoda HOM05D004324 ORTHO05D004840 1.1e-18 98.6 275 29.1
Pp3s30_709 Physcomitrium patens HOM05D004324 ORTHO05D004840 5.2e-18 96.3 234 29.9
Psat0s13993g0040 Pisum sativum HOM05D004324 ORTHO05D004840 5.2e-18 96.3 74 64.9
Cfa025533 Carpinus fangiana HOM05D000146 ORTHO05D004840 1.5e-17 94.7 323 26.6
Ca_28979_v3 Cicer arietinum L. HOM05D004324 ORTHO05D004840 1.9e-15 87.8 278 29.5
Cfa023222 Carpinus fangiana HOM05D004324 ORTHO05D004840 2.3e-13 80.9 268 28.7
Actinidia02866 Actinidia chinensis HOM05D004324 ORTHO05D004840 2.8e-11 73.9 103 46.6
Cfa024978 Carpinus fangiana HOM05D004324 ORTHO05D034102 1.8e-10 71.2 194 28.9
Prupe.2G076400 Prunus persica HOM05D004324 ORTHO05D004840 1.8e-10 71.2 53 69.8
Aa31sc49G50 Aethionema arabicum HOM05D004324 ORTHO05D004840 2.2e-08 64.3 45 71.1
Medtr4g019730 Medicago truncatula HOM05D000814 ORTHO05D004840 6.4e-08 62.8 42 71.4


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