Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g00306 Nelumbo nucifera HOM05D000806 ORTHO05D002320 4.8e-38 160.6 78 100.0
Nn010s41432 Nelumbo nucifera HOM05D000806 ORTHO05D002320 4.7e-33 144.1 78 88.5
Nn010s41447 Nelumbo nucifera HOM05D000806 ORTHO05D002320 4.7e-33 144.1 78 88.5
Gohir.A07G163654 Gossypium hirsutum HOM05D000806 ORTHO05D002320 1.0e-27 126.3 78 78.2
Gohir.A07G167012 Gossypium hirsutum HOM05D000806 ORTHO05D002320 1.0e-27 126.3 78 78.2
AUR62032522 Chenopodium quinoa HOM05D000806 ORTHO05D002320 6.5e-27 123.6 74 77.0
PGR111G0026 Punica granatum HOM05D000806 ORTHO05D002320 6.5e-27 123.6 78 75.6
Gorai.004G276900 Gossypium raimondii HOM05D000806 ORTHO05D002320 8.5e-27 123.2 78 76.9
PSO548G0072 Papaver somniferum HOM05D000806 ORTHO05D002320 1.5e-26 122.5 78 74.4
Potri.013G162600 Populus trichocarpa HOM05D000806 ORTHO05D002320 2.5e-26 121.7 74 75.7
DCAR_032493 Daucus carota HOM05D000806 ORTHO05D002320 4.2e-26 120.9 77 74.0
Cpa.g.sc0.171 Carica papaya HOM05D000806 ORTHO05D002320 7.2e-26 120.2 78 73.1
Gohir.D04G104048 Gossypium hirsutum HOM05D000806 ORTHO05D002320 1.2e-25 119.4 76 75.0
Lalb_Chr23g0274531 Lupinus albus HOM05D000806 ORTHO05D002320 1.6e-25 119.0 74 73.0
RcHm_v2.0_Chr5g0042991 Rosa chinensis HOM05D000806 ORTHO05D002320 1.6e-25 119.0 73 75.3
RcHm_v2.0_CPg0502101 Rosa chinensis HOM05D000806 ORTHO05D002320 1.6e-25 119.0 73 75.3
CAN.G1897.7 Capsicum annuum HOM05D000806 ORTHO05D002320 4.7e-25 117.5 77 72.7
CAN.G3.25 Capsicum annuum HOM05D000806 ORTHO05D002320 4.7e-25 117.5 77 72.7
CAN.G653.1 Capsicum annuum HOM05D000806 ORTHO05D002320 4.7e-25 117.5 77 72.7
CAN.G793.44 Capsicum annuum HOM05D000806 ORTHO05D002320 4.7e-25 117.5 77 72.7
Nn2g12581 Nelumbo nucifera HOM05D000806 ORTHO05D002320 4.7e-25 117.5 68 82.4
CAN.G1012.2 Capsicum annuum HOM05D000806 ORTHO05D002320 6.1e-25 117.1 77 72.7
Cpa.g.sc120.42 Carica papaya HOM05D000806 ORTHO05D002320 6.1e-25 117.1 78 71.8
HanXRQChr01g0020371 Helianthus annuus HOM05D000806 ORTHO05D002320 8.0e-25 116.7 74 74.3
HanXRQChr02g0044911 Helianthus annuus HOM05D000806 ORTHO05D002320 8.0e-25 116.7 74 74.3
HanXRQChr10g0283541 Helianthus annuus HOM05D000806 ORTHO05D002320 8.0e-25 116.7 74 74.3
HanXRQChr10g0284231 Helianthus annuus HOM05D000806 ORTHO05D002320 8.0e-25 116.7 74 74.3
HanXRQChr10g0289251 Helianthus annuus HOM05D000806 ORTHO05D002320 8.0e-25 116.7 74 74.3
HanXRQChr11g0326811 Helianthus annuus HOM05D000806 ORTHO05D002320 8.0e-25 116.7 74 74.3
HanXRQCPg0580021 Helianthus annuus HOM05D000806 ORTHO05D002320 8.0e-25 116.7 74 74.3
Lsat_1_v5_gn_8_144641 Lactuca sativa HOM05D000806 ORTHO05D002320 1.0e-24 116.3 74 74.3
Eucgr.E02609 Eucalyptus grandis HOM05D000806 ORTHO05D002320 2.3e-24 115.2 72 75.0
Nitab4.5_0009663g0040 Nicotiana tabacum HOM05D000806 ORTHO05D002320 2.3e-24 115.2 77 71.4
LjContig00318g0000728 Lotus japonicus HOM05D000806 ORTHO05D002320 6.8e-24 113.6 74 71.6
Lj1g0000993 Lotus japonicus HOM05D000806 ORTHO05D002320 2.0e-23 112.1 74 70.3
BcaC04g21638 Brassica carinata HOM05D000806 ORTHO05D002320 7.5e-23 110.2 78 69.2
Nitab4.5_0000138g0260 Nicotiana tabacum HOM05D000806 ORTHO05D002320 1.3e-22 109.4 75 68.0
RcHm_v2.0_Chr6g0281341 Rosa chinensis HOM05D000806 ORTHO05D002320 1.3e-22 109.4 73 68.5
MELO3C028654.2 Cucumis melo HOM05D000806 ORTHO05D002320 1.7e-22 109.0 78 70.5
SGA_v2.0_scaffold255G45490 Striga asiatica HOM05D000806 ORTHO05D002320 1.7e-22 109.0 78 66.7
MELO3C027978.2 Cucumis melo HOM05D000806 ORTHO05D002320 2.8e-22 108.2 78 69.2
SGA_v2.0_scaffold781G53597 Striga asiatica HOM05D000806 ORTHO05D002320 2.8e-22 108.2 78 66.7
C02p43520 Brassica napus HOM05D000806 ORTHO05D002320 4.9e-22 107.5 78 67.9
C09p29580 Brassica napus HOM05D000806 ORTHO05D002320 4.9e-22 107.5 78 67.9
C09p40220 Brassica napus HOM05D000806 ORTHO05D002320 4.9e-22 107.5 78 67.9
BolSC35t60644H Brassica oleracea HOM05D000806 ORTHO05D002320 4.9e-22 107.5 78 67.9
BolSC35t60752H Brassica oleracea HOM05D000806 ORTHO05D002320 4.9e-22 107.5 78 67.9
BraA06t25423Z Brassica rapa HOM05D000806 ORTHO05D002320 4.9e-22 107.5 78 67.9
BraSC59t46593Z Brassica rapa HOM05D000806 ORTHO05D002320 4.9e-22 107.5 78 67.9
AL2G20668 Arabidopsis lyrata HOM05D000806 ORTHO05D002320 1.1e-21 106.3 74 68.9
arahy.Tifrunner.gnm1.ann1.15M9SP Arachis hypogaea HOM05D000806 ORTHO05D002320 1.1e-21 106.3 71 71.8
MELO3C001225.2 Cucumis melo HOM05D000806 ORTHO05D002320 1.4e-21 105.9 76 68.4
ATCG00500 Arabidopsis thaliana HOM05D000806 ORTHO05D002320 1.8e-21 105.5 74 68.9
Eucgr.I02537 Eucalyptus grandis HOM05D000806 ORTHO05D002320 4.1e-21 104.4 68 72.1
GSVIVG01010035001 Vitis vinifera HOM05D003557 ORTHO05D001267 4.1e-21 104.4 68 72.1
AL2G21530 Arabidopsis lyrata HOM05D000806 ORTHO05D002320 9.1e-21 103.2 74 67.6
TPR.G16839 Trifolium pratense HOM05D000806 ORTHO05D002320 2.7e-20 101.7 74 64.9
Potri.005G150200 Populus trichocarpa HOM05D000806 ORTHO05D002320 3.5e-20 101.3 68 69.1
Ah.09g227360 Amaranthus hybridus HOM05D000806 ORTHO05D007429 4.5e-20 100.9 67 70.1
Ah.10g027510 Amaranthus hybridus HOM05D000806 ORTHO05D002324 4.5e-20 100.9 67 70.1
Lsat_1_v5_gn_7_98301 Lactuca sativa HOM05D000806 ORTHO05D002320 1.0e-19 99.8 74 68.9
EL10As15g24119 Beta vulgaris HOM05D000806 ORTHO05D002320 2.3e-19 98.6 67 68.7
EL10As1g23054 Beta vulgaris HOM05D000806 ORTHO05D002324 2.3e-19 98.6 67 68.7
AUR62006476 Chenopodium quinoa HOM05D000806 ORTHO05D002320 2.9e-19 98.2 60 75.0
AUR62042261 Chenopodium quinoa HOM05D000806 ORTHO05D002324 2.9e-19 98.2 60 75.0
Gohir.1Z049999 Gossypium hirsutum HOM05D000806 ORTHO05D002320 3.8e-19 97.8 67 70.1
CDE02G2600 Ceratophyllum demersum HOM05D000806 ORTHO05D002320 5.0e-19 97.4 60 75.0
Ah.10g027920 Amaranthus hybridus HOM05D000806 ORTHO05D002324 8.6e-19 96.7 59 74.6
Ah.10g028630 Amaranthus hybridus HOM05D000806 ORTHO05D002324 8.6e-19 96.7 59 74.6
Phvul.002G278116 Phaseolus vulgaris HOM05D000806 ORTHO05D002320 1.1e-18 96.3 74 60.8
Gohir.1Z050266 Gossypium hirsutum HOM05D000806 ORTHO05D002320 1.5e-18 95.9 59 76.3
Gohir.D13G043800 Gossypium hirsutum HOM05D000806 ORTHO05D002320 1.9e-18 95.5 62 72.6
AUR62041919 Chenopodium quinoa HOM05D000806 ORTHO05D002324 2.5e-18 95.1 60 73.3
QL93p0311_0018 Quercus lobata HOM05D000806 ORTHO05D002320 2.5e-18 95.1 67 67.2
Psat2g111000 Pisum sativum HOM05D000806 ORTHO05D002320 4.2e-18 94.4 74 58.1
Gohir.D04G129256 Gossypium hirsutum HOM05D000806 ORTHO05D002320 9.5e-18 93.2 61 72.1
HPP92_028392 Vanilla planifolia HOM05D000806 ORTHO05D002320 1.6e-17 92.4 72 59.7
HPP92_028399 Vanilla planifolia HOM05D000806 ORTHO05D002320 1.6e-17 92.4 72 59.7
HPP92_028409 Vanilla planifolia HOM05D000806 ORTHO05D002320 1.6e-17 92.4 72 59.7
AUR62004684 Chenopodium quinoa HOM05D000806 ORTHO05D002320 2.8e-17 91.7 59 69.5
Cc00_g01670 Coffea canephora HOM05D000806 ORTHO05D002320 2.8e-17 91.7 69 66.7
Cc11_g02210 Coffea canephora HOM05D000806 ORTHO05D002320 2.8e-17 91.7 69 66.7
Hma1.2p1_0861F.1_g229660 Hydrangea macrophylla HOM05D000806 ORTHO05D002320 2.8e-17 91.7 59 72.9
Hma1.2p1_0861F.1_g229663 Hydrangea macrophylla HOM05D000806 ORTHO05D002320 2.8e-17 91.7 59 72.9
Hma1.2p1_0861F.1_g229667 Hydrangea macrophylla HOM05D000806 ORTHO05D002320 2.8e-17 91.7 59 72.9
unitig_91.g26508 Utricularia gibba HOM05D000806 ORTHO05D002320 6.1e-17 90.5 67 62.7
Sed0009930 Sechium edule HOM05D000806 ORTHO05D002320 1.0e-16 89.7 78 61.5
ECA074G0009 Erigeron canadensis HOM05D000806 ORTHO05D002324 1.4e-16 89.4 67 64.2
ECA077G0001 Erigeron canadensis HOM05D000806 ORTHO05D002324 1.4e-16 89.4 67 64.2
Prupe.7G029700 Prunus persica HOM05D000806 ORTHO05D002320 1.4e-16 89.4 56 73.2
Psat0s1152g0040 Pisum sativum HOM05D000806 ORTHO05D002320 1.8e-16 89.0 71 57.7
EL10As12g24027 Beta vulgaris HOM05D000806 ORTHO05D002320 2.3e-16 88.6 54 74.1
Psat5g286240 Pisum sativum HOM05D000806 ORTHO05D002320 2.3e-16 88.6 71 56.3
ECA236G1817 Erigeron canadensis HOM05D000806 ORTHO05D000001 4.0e-16 87.8 60 68.3
Sed0010807 Sechium edule HOM05D000806 ORTHO05D002320 5.2e-16 87.4 56 73.2
Sed0026664 Sechium edule HOM05D000806 ORTHO05D002320 5.2e-16 87.4 56 73.2
Psat0s2754g0160 Pisum sativum HOM05D000806 ORTHO05D002320 8.9e-16 86.7 71 54.9
Psat0s6989g0080 Pisum sativum HOM05D000806 ORTHO05D002320 8.9e-16 86.7 71 54.9
Psat6g140480 Pisum sativum HOM05D000806 ORTHO05D002320 8.9e-16 86.7 71 54.9
Hund03831 Selenicereus undatus HOM05D000806 ORTHO05D002320 1.2e-15 86.3 77 54.5
Hund08023 Selenicereus undatus HOM05D000806 ORTHO05D002320 1.2e-15 86.3 77 54.5
Hma1.2p1_0861F.1_g229661 Hydrangea macrophylla HOM05D000806 ORTHO05D002320 1.5e-15 85.9 54 75.9
Hma1.2p1_0861F.1_g229662 Hydrangea macrophylla HOM05D000806 ORTHO05D002320 1.5e-15 85.9 54 75.9
Hma1.2p1_0861F.1_g229665 Hydrangea macrophylla HOM05D000806 ORTHO05D002320 1.5e-15 85.9 54 75.9
Hma1.2p1_0861F.1_g229669 Hydrangea macrophylla HOM05D000806 ORTHO05D002320 1.5e-15 85.9 54 75.9
Hund07992 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.4e-15 84.7 77 53.2
Hund08575 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.4e-15 84.7 77 53.2
Hund08809 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.4e-15 84.7 77 53.2
Hund19838 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.4e-15 84.7 77 53.2
Hund22772 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.4e-15 84.7 77 53.2
Hund27485 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.4e-15 84.7 77 53.2
Hund27490 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.4e-15 84.7 77 53.2
Hund27570 Selenicereus undatus HOM05D000680 ORTHO05D002320 3.4e-15 84.7 77 53.2
Hund27599 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.4e-15 84.7 77 53.2
Hund27874 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.4e-15 84.7 77 53.2
Hund27955 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.4e-15 84.7 77 53.2
Hund27977 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.4e-15 84.7 77 53.2
Hund28101 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.4e-15 84.7 77 53.2
Hund28450 Selenicereus undatus HOM05D000680 ORTHO05D002320 3.4e-15 84.7 77 53.2
Hund28473 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.4e-15 84.7 77 53.2
Hund28492 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.4e-15 84.7 77 53.2
Hund28511 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.4e-15 84.7 77 53.2
Hund28624 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.4e-15 84.7 77 53.2
Hund28670 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.4e-15 84.7 77 53.2
Hund28738 Selenicereus undatus HOM05D000680 ORTHO05D002320 3.4e-15 84.7 77 53.2
Hund28748 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.4e-15 84.7 77 53.2
Hund28838 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.4e-15 84.7 77 53.2
Hund29142 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.4e-15 84.7 77 53.2
Hund29174 Selenicereus undatus HOM05D000680 ORTHO05D002320 3.4e-15 84.7 77 53.2
Hund29363 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.4e-15 84.7 77 53.2
Hund29462 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.4e-15 84.7 77 53.2
Hund29492 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.4e-15 84.7 77 53.2
Hund29619 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.4e-15 84.7 77 53.2
Hund29637 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.4e-15 84.7 77 53.2
Hund29805 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.4e-15 84.7 77 53.2
Hund29828 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.4e-15 84.7 77 53.2
Hund29868 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.4e-15 84.7 77 53.2
Hund30328 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.4e-15 84.7 77 53.2
Hund30362 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.4e-15 84.7 77 53.2
Hund30468 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.4e-15 84.7 77 53.2
Hund30508 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.4e-15 84.7 77 53.2
Hund30560 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.4e-15 84.7 77 53.2
Hund30896 Selenicereus undatus HOM05D000806 ORTHO05D002320 3.4e-15 84.7 77 53.2
Hund22639 Selenicereus undatus HOM05D000806 ORTHO05D002320 2.2e-14 82.0 69 59.4
Psat0s1586g0240 Pisum sativum HOM05D000806 ORTHO05D002320 4.9e-14 80.9 74 50.0
Thhalv10011034m.g Eutrema salsugineum HOM05D000806 ORTHO05D002320 4.1e-13 77.8 59 64.4
Nn3g19983 Nelumbo nucifera HOM05D000806 ORTHO05D002320 4.1e-13 77.8 49 77.6
SEGI_26932 Sequoiadendron giganteum HOM05D000806 ORTHO05D002320 7.0e-13 77.0 66 53.0
SMO364G0525 Selaginella moellendorffii HOM05D000806 ORTHO05D002320 9.2e-13 76.6 75 46.7
SEGI_31685 Sequoiadendron giganteum HOM05D000806 ORTHO05D002320 1.2e-12 76.3 66 53.0
CARHR116860 Cardamine hirsuta HOM05D000806 ORTHO05D002320 2.7e-12 75.1 60 60.0
Hma1.2p1_0242F.1_g100623 Hydrangea macrophylla HOM05D000806 ORTHO05D002320 3.5e-12 74.7 47 72.3
Gohir.D01G102333 Gossypium hirsutum HOM05D000806 ORTHO05D002320 7.8e-12 73.6 50 70.0
Peaxi162Scf00021g00819 Petunia axillaris HOM05D000806 ORTHO05D002320 2.9e-11 71.6 66 57.6
Lj2C1239T39 Lonicera japonica HOM05D000806 ORTHO05D002320 8.6e-11 70.1 53 54.7
BNapus_Darmor_BZH_scaffold_253p00210 Brassica napus HOM05D000806 ORTHO05D002320 1.1e-10 69.7 57 61.4
Cre12.g484000 Chlamydomonas reinhardtii HOM05D000806 ORTHO05D002320 1.9e-10 68.9 76 39.5
vmacro13611 Vaccinium macrocarpon HOM05D000806 ORTHO05D002320 1.2e-09 66.2 68 47.1
vmacro13610 Vaccinium macrocarpon HOM05D000806 ORTHO05D002320 1.6e-09 65.9 68 45.6
Ah.03g144240 Amaranthus hybridus HOM05D000806 ORTHO05D002324 4.7e-09 64.3 44 68.2
MD02G1049400 Malus domestica HOM05D000806 ORTHO05D002320 4.0e-08 61.2 39 69.2
Phvul.006G066900 Phaseolus vulgaris HOM05D000806 ORTHO05D002320 1.5e-07 59.3 42 64.3
Hund01487 Selenicereus undatus HOM05D000806 ORTHO05D002320 1.5e-07 59.3 66 47.0
Lsat_1_v5_gn_9_98941 Lactuca sativa HOM05D000806 ORTHO05D002320 3.4e-07 58.2 38 68.4
VMungo0251G1963 Vigna mungo HOM05D000806 ORTHO05D010715 3.7e-06 54.7 35 68.6


User provided reference genes

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