Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn055s41939 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.5e-13 78.2 37 100.0
Nn1g10181 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.5e-13 78.2 37 100.0
Nn1g10183 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.5e-13 78.2 37 100.0
Nn2g13212 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.5e-13 78.2 37 100.0
Nn423s46610 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.5e-13 78.2 37 100.0
Nn5g30925 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.5e-13 78.2 37 100.0
CAN.G129.6 Capsicum annuum HOM05D005573 ORTHO05D007161 5.7e-13 76.3 37 97.3
CAN.G1478.12 Capsicum annuum HOM05D005573 ORTHO05D007161 5.7e-13 76.3 37 97.3
CAN.G551.66 Capsicum annuum HOM05D005573 ORTHO05D007161 5.7e-13 76.3 37 97.3
CAN.G65.126 Capsicum annuum HOM05D005573 ORTHO05D007161 5.7e-13 76.3 37 97.3
CAN.G653.3 Capsicum annuum HOM05D005573 ORTHO05D007161 5.7e-13 76.3 37 97.3
Migut.D01426 Erythranthe guttata HOM05D005573 ORTHO05D007161 5.7e-13 76.3 37 97.3
Hma1.2p1_0248F.1_g102160 Hydrangea macrophylla HOM05D005573 ORTHO05D007161 5.7e-13 76.3 37 97.3
PGR111G0074 Punica granatum HOM05D005573 ORTHO05D007161 5.7e-13 76.3 37 97.3
Eucgr.B02956 Eucalyptus grandis HOM05D005573 ORTHO05D007161 7.4e-13 75.9 37 94.6
Nn6g33243 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.3e-12 75.1 36 97.2
PSO548G0019 Papaver somniferum HOM05D005573 ORTHO05D007161 1.3e-12 75.1 37 97.3
arahy.Tifrunner.gnm1.ann1.DMW7HF Arachis hypogaea HOM05D005573 ORTHO05D007161 1.7e-12 74.7 37 94.6
CAN.G1183.7 Capsicum annuum HOM05D005573 ORTHO05D007161 1.7e-12 74.7 37 94.6
Solyc09g015310.3 Solanum lycopersicum HOM05D005573 ORTHO05D007161 1.7e-12 74.7 36 94.4
Potri.013G163300 Populus trichocarpa HOM05D005573 ORTHO05D007161 2.8e-12 73.9 37 91.9
SalBow1G4134 Salvia bowleyana HOM05D005573 ORTHO05D007161 3.7e-12 73.6 37 94.6
DCAR_032486 Daucus carota HOM05D005573 ORTHO05D007161 4.8e-12 73.2 37 94.6
HanXRQChr02g0041471 Helianthus annuus HOM05D005573 ORTHO05D007161 4.8e-12 73.2 37 94.6
HanXRQChr02g0044961 Helianthus annuus HOM05D005573 ORTHO05D007161 4.8e-12 73.2 37 94.6
HanXRQChr07g0201021 Helianthus annuus HOM05D005573 ORTHO05D007161 4.8e-12 73.2 37 94.6
HanXRQChr08g0210291 Helianthus annuus HOM05D005573 ORTHO05D007161 4.8e-12 73.2 37 94.6
HanXRQChr10g0289201 Helianthus annuus HOM05D005573 ORTHO05D007161 4.8e-12 73.2 37 94.6
HanXRQChr11g0326731 Helianthus annuus HOM05D005573 ORTHO05D007161 4.8e-12 73.2 37 94.6
HanXRQChr13g0413641 Helianthus annuus HOM05D005573 ORTHO05D007161 4.8e-12 73.2 37 94.6
HanXRQChr13g0413681 Helianthus annuus HOM05D005573 ORTHO05D029920 4.8e-12 73.2 37 94.6
HanXRQChr13g0413711 Helianthus annuus HOM05D005573 ORTHO05D007161 4.8e-12 73.2 37 94.6
HanXRQChr13g0413751 Helianthus annuus HOM05D005573 ORTHO05D029920 4.8e-12 73.2 37 94.6
HanXRQChr13g0413781 Helianthus annuus HOM05D005573 ORTHO05D007161 4.8e-12 73.2 37 94.6
HanXRQChr13g0413831 Helianthus annuus HOM05D005573 ORTHO05D029920 4.8e-12 73.2 37 94.6
HanXRQChr13g0413861 Helianthus annuus HOM05D005573 ORTHO05D007161 4.8e-12 73.2 37 94.6
HanXRQChr13g0413901 Helianthus annuus HOM05D005573 ORTHO05D029920 4.8e-12 73.2 37 94.6
HanXRQChr13g0413931 Helianthus annuus HOM05D005573 ORTHO05D007161 4.8e-12 73.2 37 94.6
HanXRQCPg0579941 Helianthus annuus HOM05D005573 ORTHO05D007161 4.8e-12 73.2 37 94.6
Lsat_1_v5_gn_3_99201 Lactuca sativa HOM05D005573 ORTHO05D007161 4.8e-12 73.2 37 94.6
Lj2P1237T91 Lonicera japonica HOM05D005573 ORTHO05D007161 4.8e-12 73.2 37 94.6
Lj2P1239T179 Lonicera japonica HOM05D005573 ORTHO05D007161 4.8e-12 73.2 37 94.6
Lj4g0013543 Lotus japonicus HOM05D005573 ORTHO05D007161 4.8e-12 73.2 37 94.6
LjContig00318g0014176 Lotus japonicus HOM05D005573 ORTHO05D007161 4.8e-12 73.2 37 94.6
Lalb_Chr15g0080691 Lupinus albus HOM05D005573 ORTHO05D007161 4.8e-12 73.2 37 91.9
PGSC0003DMG400024039 Solanum tuberosum HOM05D005573 ORTHO05D007161 4.8e-12 73.2 37 94.6
Medtr4g051220 Medicago truncatula HOM05D005573 ORTHO05D007161 6.3e-12 72.8 37 94.6
CAN.G100.47 Capsicum annuum HOM05D005573 ORTHO05D007161 8.2e-12 72.4 37 91.9
EL10As27g24246 Beta vulgaris HOM05D000216 ORTHO05D007161 1.8e-11 71.2 37 91.9
Gohir.A07G163636 Gossypium hirsutum HOM05D005573 ORTHO05D007161 1.8e-11 71.2 36 91.7
Gohir.A08G157500 Gossypium hirsutum HOM05D005573 ORTHO05D007161 1.8e-11 71.2 36 91.7
Gohir.D04G083800 Gossypium hirsutum HOM05D005573 ORTHO05D007161 2.4e-11 70.9 36 88.9
Gohir.A10G100366 Gossypium hirsutum HOM05D005573 ORTHO05D007161 3.1e-11 70.5 36 88.9
Phvul.008G150500 Phaseolus vulgaris HOM05D005573 ORTHO05D007161 4.1e-11 70.1 36 86.1
Oeu012806.1 Olea europaea HOM05D005573 ORTHO05D007161 9.1e-11 68.9 34 88.2
AL2G20730 Arabidopsis lyrata HOM05D005573 ORTHO05D007161 1.2e-10 68.6 37 89.2
AL2G21420 Arabidopsis lyrata HOM05D005573 ORTHO05D007161 1.2e-10 68.6 37 89.2
ATCG00380 Arabidopsis thaliana HOM05D005573 ORTHO05D007161 1.2e-10 68.6 37 89.2
A06p23260 Brassica napus HOM05D005573 ORTHO05D007161 1.2e-10 68.6 37 89.2
BNapus_Darmor_BZH_scaffold_287p00070 Brassica napus HOM05D005573 ORTHO05D007161 1.2e-10 68.6 37 89.2
BolSC45t60866H Brassica oleracea HOM05D005573 ORTHO05D007161 1.2e-10 68.6 37 89.2
BolSC45t60946H Brassica oleracea HOM05D005573 ORTHO05D007161 1.2e-10 68.6 37 89.2
BolSC46t60993H Brassica oleracea HOM05D005573 ORTHO05D007161 1.2e-10 68.6 37 89.2
BolSC46t61042H Brassica oleracea HOM05D005573 ORTHO05D007161 1.2e-10 68.6 37 89.2
BolSC49t61189H Brassica oleracea HOM05D005573 ORTHO05D007161 1.2e-10 68.6 37 89.2
BraA06t25428Z Brassica rapa HOM05D005573 ORTHO05D007161 1.2e-10 68.6 37 89.2
BraSC140t45578Z Brassica rapa HOM05D005573 ORTHO05D007161 1.2e-10 68.6 37 89.2
BraSC151t45711Z Brassica rapa HOM05D005573 ORTHO05D007161 1.2e-10 68.6 37 89.2
BraSC25t45875Z Brassica rapa HOM05D005573 ORTHO05D007161 1.2e-10 68.6 37 89.2
CARHR282030 Cardamine hirsuta HOM05D005573 ORTHO05D007161 1.2e-10 68.6 37 89.2
Thhalv10010766m.g Eutrema salsugineum HOM05D005573 ORTHO05D007161 1.2e-10 68.6 37 89.2
Sed0002328 Sechium edule HOM05D005573 ORTHO05D007161 1.2e-10 68.6 37 89.2
Sed0008322 Sechium edule HOM05D005573 ORTHO05D007161 1.2e-10 68.6 37 89.2
CAN.G331.1 Capsicum annuum HOM05D005573 ORTHO05D007161 5.9e-10 66.2 37 81.1
TWI60G0396 Tripterygium wilfordii HOM05D005573 ORTHO05D007161 7.7e-10 65.9 37 83.8
Zm00001eb039080 Zea mays HOM05D005573 ORTHO05D007161 3.8e-09 63.5 35 82.9
Zm00001eb039210 Zea mays HOM05D005573 ORTHO05D007161 3.8e-09 63.5 35 82.9
Zm00001eb435020 Zea mays HOM05D005573 ORTHO05D007161 3.8e-09 63.5 35 82.9
Zm00001eb435220 Zea mays HOM05D005573 ORTHO05D007161 3.8e-09 63.5 35 82.9
Zm00001eb435420 Zea mays HOM05D005573 ORTHO05D007161 3.8e-09 63.5 35 82.9
Zm00001eb435680 Zea mays HOM05D005573 ORTHO05D007161 3.8e-09 63.5 35 82.9
Zm00001eb438350 Zea mays HOM05D005573 ORTHO05D007161 3.8e-09 63.5 35 82.9
Zm00001eb440990 Zea mays HOM05D005573 ORTHO05D007161 3.8e-09 63.5 35 82.9
Solyc11g022620.1 Solanum lycopersicum HOM05D005573 ORTHO05D007161 5.0e-09 63.2 36 77.8
Solyc09g015330.2 Solanum lycopersicum HOM05D005573 ORTHO05D007161 1.1e-08 62.0 36 83.3
Nitab4.5_0000261g0250 Nicotiana tabacum HOM05D005573 ORTHO05D007161 2.7e-07 57.4 28 92.9
Oeu052069.1 Olea europaea HOM05D005573 ORTHO05D007161 2.7e-07 57.4 32 81.2
Oeu041772.1 Olea europaea HOM05D005573 ORTHO05D007161 1.8e-06 54.7 31 80.6
arahy.Tifrunner.gnm1.ann1.NAZW4C Arachis hypogaea HOM05D005573 ORTHO05D007161 8.8e-06 52.4 27 85.2


User provided reference genes

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