Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn021s41514 Nelumbo nucifera HOM05D000540 ORTHO05D008899 4.0e-53 211.1 99 100.0
Nn145s44091 Nelumbo nucifera HOM05D000540 ORTHO05D008899 4.0e-53 211.1 99 100.0
Nn3g16152 Nelumbo nucifera HOM05D000540 ORTHO05D008899 4.0e-53 211.1 99 100.0
Nn020s41485 Nelumbo nucifera HOM05D000540 ORTHO05D008899 2.9e-32 141.7 107 69.2
Nn5g27213 Nelumbo nucifera HOM05D000540 ORTHO05D008899 1.0e-29 133.3 103 68.0
AL1G45030 Arabidopsis lyrata HOM05D000540 ORTHO05D008899 6.8e-29 130.6 93 73.1
Nn1g08201 Nelumbo nucifera HOM05D000540 ORTHO05D008899 2.0e-28 129.0 102 66.7
MELO3C028092.2 Cucumis melo HOM05D000540 ORTHO05D008899 7.5e-28 127.1 75 82.7
LjContig00489g0018536 Lotus japonicus HOM05D000540 ORTHO05D008899 7.5e-28 127.1 75 82.7
SalBow1G0808 Salvia bowleyana HOM05D000540 ORTHO05D008899 7.5e-28 127.1 76 82.9
SalBow1G3106 Salvia bowleyana HOM05D000540 ORTHO05D008899 7.5e-28 127.1 76 82.9
Sed0004093 Sechium edule HOM05D000540 ORTHO05D008899 7.5e-28 127.1 75 82.7
Sed0007321 Sechium edule HOM05D000540 ORTHO05D008899 7.5e-28 127.1 75 82.7
Sed0008426 Sechium edule HOM05D000540 ORTHO05D008899 7.5e-28 127.1 75 82.7
Sed0015411 Sechium edule HOM05D000540 ORTHO05D008899 7.5e-28 127.1 75 82.7
Sed0019752 Sechium edule HOM05D000540 ORTHO05D008899 7.5e-28 127.1 75 82.7
Sed0026411 Sechium edule HOM05D000540 ORTHO05D008899 7.5e-28 127.1 75 82.7
CsaV3_2G008470 Cucumis sativus L. HOM05D006248 ORTHO05D007896 9.8e-28 126.7 81 79.0
BolSC56t61242H Brassica oleracea HOM05D000540 ORTHO05D008899 1.3e-27 126.3 90 68.9
GSVIVG01023980001 Vitis vinifera HOM05D000540 ORTHO05D008899 1.7e-27 125.9 75 81.3
RcHm_v2.0_CPg0502591 Rosa chinensis HOM05D000540 ORTHO05D008899 2.9e-27 125.2 75 81.3
Gohir.A04G039075 Gossypium hirsutum HOM05D000540 ORTHO05D008899 3.7e-27 124.8 75 81.3
Gohir.D01G102216 Gossypium hirsutum HOM05D000540 ORTHO05D008899 3.7e-27 124.8 75 81.3
DCAR_032528 Daucus carota HOM05D000540 ORTHO05D008899 6.4e-27 124.0 75 81.3
DCAR_032548 Daucus carota HOM05D000540 ORTHO05D008899 6.4e-27 124.0 75 81.3
Potri.005G154350 Populus trichocarpa HOM05D000540 ORTHO05D008899 6.4e-27 124.0 75 81.3
Potri.013G138612 Populus trichocarpa HOM05D000540 ORTHO05D008899 6.4e-27 124.0 75 81.3
CAN.G1109.8 Capsicum annuum HOM05D000540 ORTHO05D008899 8.3e-27 123.6 75 80.0
CAN.G114.6 Capsicum annuum HOM05D000540 ORTHO05D008899 8.3e-27 123.6 75 80.0
CAN.G781.25 Capsicum annuum HOM05D000540 ORTHO05D008899 8.3e-27 123.6 75 80.0
CsaV3_UNG209010 Cucumis sativus L. HOM05D000540 ORTHO05D008899 8.3e-27 123.6 74 81.1
PGR111G0050 Punica granatum HOM05D000540 ORTHO05D008899 1.1e-26 123.2 75 80.0
PGR111G0124 Punica granatum HOM05D000540 ORTHO05D008899 1.1e-26 123.2 75 80.0
Gohir.1Z050392 Gossypium hirsutum HOM05D000540 ORTHO05D008899 1.8e-26 122.5 76 81.6
Nitab4.5_0003083g0040 Nicotiana tabacum HOM05D007194 ORTHO05D008899 2.4e-26 122.1 75 80.0
Gohir.A10G084500 Gossypium hirsutum HOM05D000540 ORTHO05D008899 3.2e-26 121.7 75 78.7
Gorai.007G229500 Gossypium raimondii HOM05D000540 ORTHO05D008899 3.2e-26 121.7 76 80.3
PSO548G0098 Papaver somniferum HOM05D000540 ORTHO05D008899 4.1e-26 121.3 77 79.2
PSO548G0119 Papaver somniferum HOM05D000540 ORTHO05D008899 4.1e-26 121.3 77 79.2
Lalb_Chr07g0191961 Lupinus albus HOM05D000540 ORTHO05D008899 7.0e-26 120.6 75 80.0
AL2G20490 Arabidopsis lyrata HOM05D000540 ORTHO05D008899 1.2e-25 119.8 58 94.8
AL4G23550 Arabidopsis lyrata HOM05D000540 ORTHO05D008899 1.2e-25 119.8 58 94.8
ATCG00840 Arabidopsis thaliana HOM05D000540 ORTHO05D008899 1.2e-25 119.8 58 94.8
ATCG01300 Arabidopsis thaliana HOM05D000540 ORTHO05D008899 1.2e-25 119.8 58 94.8
BolC2t10582H Brassica oleracea HOM05D000540 ORTHO05D008899 1.2e-25 119.8 58 94.8
CARHR282300 Cardamine hirsuta HOM05D000540 ORTHO05D008899 1.2e-25 119.8 58 94.8
CARHR282570 Cardamine hirsuta HOM05D000540 ORTHO05D008899 1.2e-25 119.8 58 94.8
Nn4g25233 Nelumbo nucifera HOM05D000540 ORTHO05D008899 1.2e-25 119.8 77 79.2
RcHm_v2.0_Chr2g0118491 Rosa chinensis HOM05D000540 ORTHO05D008899 1.2e-25 119.8 58 96.6
ClCG10G020130 Citrullus lanatus HOM05D000540 ORTHO05D008899 2.0e-25 119.0 58 94.8
Peaxi162Scf00211g00237 Petunia axillaris HOM05D000540 ORTHO05D008899 2.0e-25 119.0 75 78.7
Nitab4.5_0002418g0160 Nicotiana tabacum HOM05D007194 ORTHO05D009182 2.7e-25 118.6 75 76.0
Gohir.D06G104900 Gossypium hirsutum HOM05D000540 ORTHO05D008899 3.5e-25 118.2 58 93.1
HanXRQChr00c0165g0572201 Helianthus annuus HOM05D000540 ORTHO05D008899 3.5e-25 118.2 75 78.7
HanXRQChr00c0368g0574201 Helianthus annuus HOM05D000540 ORTHO05D008899 3.5e-25 118.2 75 78.7
HanXRQChr00c0496g0575201 Helianthus annuus HOM05D000540 ORTHO05D008899 3.5e-25 118.2 75 78.7
HanXRQChr00c0572g0575951 Helianthus annuus HOM05D000540 ORTHO05D008899 3.5e-25 118.2 75 78.7
HanXRQChr00c0585g0576271 Helianthus annuus HOM05D000540 ORTHO05D008899 3.5e-25 118.2 75 78.7
HanXRQChr05g0152521 Helianthus annuus HOM05D000540 ORTHO05D008899 3.5e-25 118.2 75 78.7
HanXRQChr10g0284441 Helianthus annuus HOM05D000540 ORTHO05D008899 3.5e-25 118.2 75 78.7
HanXRQChr10g0318001 Helianthus annuus HOM05D000540 ORTHO05D008899 3.5e-25 118.2 75 78.7
HanXRQChr11g0321161 Helianthus annuus HOM05D000540 ORTHO05D008899 3.5e-25 118.2 75 78.7
HanXRQChr13g0416611 Helianthus annuus HOM05D000540 ORTHO05D008899 3.5e-25 118.2 75 78.7
HanXRQChr15g0488331 Helianthus annuus HOM05D000540 ORTHO05D008899 3.5e-25 118.2 75 78.7
AL2G21780 Arabidopsis lyrata HOM05D000540 ORTHO05D008899 4.6e-25 117.9 58 93.1
LjContig00318g0024355 Lotus japonicus HOM05D000540 ORTHO05D008899 4.6e-25 117.9 107 59.8
Lsat_1_v5_gn_5_27661 Lactuca sativa HOM05D000540 ORTHO05D008899 1.0e-24 116.7 58 94.8
Lsat_1_v5_gn_7_82661 Lactuca sativa HOM05D000540 ORTHO05D008899 1.0e-24 116.7 58 94.8
CAN.G1468.2 Capsicum annuum HOM05D000540 ORTHO05D008899 1.3e-24 116.3 83 68.7
Gohir.D11G213500 Gossypium hirsutum HOM05D000540 ORTHO05D008899 3.0e-24 115.2 76 76.3
GSVIVG01008706001 Vitis vinifera HOM05D000148 ORTHO05D000081 3.0e-24 115.2 63 85.7
Gohir.D06G105280 Gossypium hirsutum HOM05D000540 ORTHO05D008899 6.6e-24 114.0 75 76.0
Nitab4.5_0012158g0050 Nicotiana tabacum HOM05D007194 ORTHO05D009182 1.5e-23 112.8 58 89.7
Gohir.D04G085766 Gossypium hirsutum HOM05D000540 ORTHO05D008899 1.9e-23 112.5 76 73.7
Lj4g0015929 Lotus japonicus HOM05D000540 ORTHO05D008899 1.9e-23 112.5 75 74.7
LjContig00318g0005310 Lotus japonicus HOM05D000540 ORTHO05D008899 1.9e-23 112.5 75 74.7
LjContig00319g0005990 Lotus japonicus HOM05D000540 ORTHO05D008899 1.9e-23 112.5 75 74.7
LjContig00319g0017169 Lotus japonicus HOM05D000540 ORTHO05D008899 1.9e-23 112.5 75 74.7
Nitab4.5_0001646g0030 Nicotiana tabacum HOM05D007194 ORTHO05D009182 1.9e-23 112.5 58 91.4
Nitab4.5_0000859g0080 Nicotiana tabacum HOM05D000540 ORTHO05D008899 7.3e-23 110.5 58 89.7
GSVIVG01023244001 Vitis vinifera HOM05D000540 ORTHO05D008899 9.5e-23 110.2 92 62.0
Nitab4.5_0020349g0050 Nicotiana tabacum HOM05D000540 ORTHO05D008899 2.1e-22 109.0 75 74.7
Sopen01g007230 Solanum pennellii HOM05D007194 ORTHO05D009182 6.2e-22 107.5 58 89.7
Migut.D01325 Erythranthe guttata HOM05D000540 ORTHO05D000681 4.0e-21 104.8 63 77.8
Nitab4.5_0004376g0180 Nicotiana tabacum HOM05D000540 ORTHO05D008899 4.0e-21 104.8 66 81.8
CSS0033691 Camellia sinensis var. sinensis HOM05D000540 ORTHO05D008899 5.2e-21 104.4 54 87.0
CSS0035327 Camellia sinensis var. sinensis HOM05D000540 ORTHO05D008899 6.8e-21 104.0 48 97.9
CAN.G895.34 Capsicum annuum HOM05D000540 ORTHO05D008899 1.2e-20 103.2 58 84.5
CAN.G895.33 Capsicum annuum HOM05D000540 ORTHO05D008899 3.4e-20 101.7 85 63.5
Gohir.A12G089000 Gossypium hirsutum HOM05D000540 ORTHO05D008899 4.4e-20 101.3 62 79.0
Nitab4.5_0014666g0090 Nicotiana tabacum HOM05D000540 ORTHO05D008899 4.4e-20 101.3 75 69.3
Medtr0002s0350 Medicago truncatula HOM05D000540 ORTHO05D008899 7.5e-20 100.5 73 65.8
Ciclev10010272m.g Citrus clementina HOM05D000540 ORTHO05D008899 9.8e-20 100.1 56 87.5
Peaxi162Scf00483g00319 Petunia axillaris HOM05D000540 ORTHO05D008899 2.2e-19 99.0 62 77.4
HanXRQChr09g0256691 Helianthus annuus HOM05D000540 ORTHO05D008899 4.9e-19 97.8 64 75.0
Sed0017282 Sechium edule HOM05D000540 ORTHO05D000681 6.4e-19 97.4 44 100.0
HanXRQChr11g0352351 Helianthus annuus HOM05D000540 ORTHO05D000681 3.2e-18 95.1 63 74.6
Sed0006593 Sechium edule HOM05D000540 ORTHO05D000681 3.2e-18 95.1 44 97.7
HanXRQChr00c0349g0573971 Helianthus annuus HOM05D000540 ORTHO05D000681 9.2e-18 93.6 64 71.9
Nitab4.5_0000031g0190 Nicotiana tabacum HOM05D007194 ORTHO05D009182 9.2e-18 93.6 67 71.6
Sed0012077 Sechium edule HOM05D000540 ORTHO05D008899 9.2e-18 93.6 75 66.7
Lalb_Chr25g0281971 Lupinus albus HOM05D000540 ORTHO05D008899 2.7e-17 92.0 58 77.6
Gohir.D11G067360 Gossypium hirsutum HOM05D000540 ORTHO05D000681 6.0e-17 90.9 43 95.3
ClCG00G001570 Citrullus lanatus HOM05D000540 ORTHO05D008899 5.0e-16 87.8 58 72.4
Medtr4g051430 Medicago truncatula HOM05D000540 ORTHO05D000681 6.6e-16 87.4 91 53.8
Medtr4g047920 Medicago truncatula HOM05D000540 ORTHO05D000681 2.5e-15 85.5 91 52.7
Migut.D01406 Erythranthe guttata HOM05D000540 ORTHO05D000681 4.3e-15 84.7 37 100.0
Peaxi162Scf00525g00033 Petunia axillaris HOM05D000540 ORTHO05D008899 7.3e-15 84.0 48 83.3
HanXRQChr13g0413481 Helianthus annuus HOM05D000540 ORTHO05D008899 2.3e-13 79.0 55 70.9
Nitab4.5_0006806g0100 Nicotiana tabacum HOM05D007194 ORTHO05D009182 8.9e-13 77.0 57 66.7
Nn4g25231 Nelumbo nucifera HOM05D000540 ORTHO05D008899 1.5e-12 76.3 34 97.1
Oeu062848.1 Olea europaea HOM05D000540 ORTHO05D008899 2.0e-12 75.9 40 87.5
HanXRQChr00c0451g0574831 Helianthus annuus HOM05D000540 ORTHO05D008899 2.6e-12 75.5 53 69.8
ClCG00G001500 Citrullus lanatus HOM05D000540 ORTHO05D008899 3.4e-12 75.1 37 94.6
CAN.G1690.3 Capsicum annuum HOM05D000540 ORTHO05D000681 1.9e-10 69.3 32 96.9
Lsat_1_v5_gn_3_85660 Lactuca sativa HOM05D000445 ORTHO05D008899 7.1e-10 67.4 58 63.8
Migut.K00974 Erythranthe guttata HOM05D000540 ORTHO05D000681 2.7e-09 65.5 30 96.7
Potri.011G074401 Populus trichocarpa HOM05D000540 ORTHO05D000681 4.6e-09 64.7 47 68.1
GSVIVG01010311001 Vitis vinifera HOM05D000540 ORTHO05D008899 1.3e-08 63.2 44 70.5
HanXRQChr03g0073071 Helianthus annuus HOM05D000540 ORTHO05D008899 2.5e-07 58.9 45 68.9


User provided reference genes

Program Settings