Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn012s41456 Nelumbo nucifera HOM05D020747 ORTHO05D009471 2.0e-92 342.4 174 100.0
Nn1g02822 Nelumbo nucifera HOM05D020747 ORTHO05D009471 2.5e-87 325.5 207 84.1
Nn1g03743 Nelumbo nucifera HOM05D020747 ORTHO05D009471 2.6e-76 288.9 206 75.7
Dinv18547 Davidia involucrata HOM05D007657 ORTHO05D009471 7.2e-34 147.9 186 48.9
ClCG02G001620 Citrullus lanatus HOM05D007657 ORTHO05D009471 3.6e-25 119.0 175 43.4
Hma1.2p1_2477F.1_g322870 Hydrangea macrophylla HOM05D007657 ORTHO05D009471 4.7e-25 118.6 180 43.9
Thecc.02G164200 Theobroma cacao HOM05D007657 ORTHO05D009471 6.1e-25 118.2 169 43.8
CsaV3_7G003870 Cucumis sativus L. HOM05D007657 ORTHO05D009471 8.0e-25 117.9 175 44.0
Sed0004603 Sechium edule HOM05D007657 ORTHO05D009471 1.4e-24 117.1 131 50.4
VMungo1080G1905 Vigna mungo HOM05D007657 ORTHO05D009471 1.4e-24 117.1 114 55.3
MELO3C018792.2 Cucumis melo HOM05D007657 ORTHO05D009471 2.3e-24 116.3 102 57.8
Phvul.005G112100 Phaseolus vulgaris HOM05D007657 ORTHO05D009471 2.3e-24 116.3 114 54.4
Gohir.D02G186500 Gossypium hirsutum HOM05D007657 ORTHO05D009471 2.6e-23 112.8 141 46.8
Nn6g32371 Nelumbo nucifera HOM05D020747 ORTHO05D009471 3.4e-23 112.5 111 60.4
Psat0s3329g0040 Pisum sativum HOM05D007657 ORTHO05D009471 3.4e-23 112.5 158 43.0
Gohir.A03G163000 Gossypium hirsutum HOM05D007657 ORTHO05D009471 4.4e-23 112.1 141 49.6
Ca_01565_v3 Cicer arietinum L. HOM05D007657 ORTHO05D009471 7.5e-23 111.3 124 50.8
MBI18_g45174_MAGBIO Magnolia biondii HOM05D007657 ORTHO05D009471 7.5e-23 111.3 169 45.0
Oeu034340.1 Olea europaea HOM05D007657 ORTHO05D009471 7.5e-23 111.3 118 55.1
Glyma.12G196900 Glycine max HOM05D007657 ORTHO05D009471 9.8e-23 110.9 118 50.8
Duzib052G0340 Durio zibethinus HOM05D007657 ORTHO05D009471 1.3e-22 110.5 160 41.2
Duzib248G0741 Durio zibethinus HOM05D007657 ORTHO05D009471 2.2e-22 109.8 137 48.2
Rhsim04G0057500 Rhododendron simsii HOM05D007657 ORTHO05D009471 2.2e-22 109.8 170 40.0
Lj3g0008282 Lotus japonicus HOM05D007657 ORTHO05D009471 3.7e-22 109.0 114 50.9
Gorai.005G208700 Gossypium raimondii HOM05D007657 ORTHO05D009471 8.3e-22 107.8 141 47.5
Cpa.g.sc8.253 Carica papaya HOM05D007657 ORTHO05D009471 3.1e-21 105.9 175 44.6
MBI18_g21102_MAGBIO Magnolia biondii HOM05D007657 ORTHO05D009471 3.1e-21 105.9 172 43.6
MD17G1091100 Malus domestica HOM05D007657 ORTHO05D009471 3.1e-21 105.9 101 53.5
TWI18G0648 Tripterygium wilfordii HOM05D007657 ORTHO05D009471 7.0e-21 104.8 151 41.7
Medtr2g089070 Medicago truncatula HOM05D007657 ORTHO05D009471 2.7e-20 102.8 119 48.7
CAN.G86.24 Capsicum annuum HOM05D007657 ORTHO05D009471 3.5e-20 102.4 161 42.2
arahy.Tifrunner.gnm1.ann1.X70W6B Arachis hypogaea HOM05D007657 ORTHO05D009471 4.5e-20 102.1 124 47.6
Lalb_Chr14g0375601 Lupinus albus HOM05D007657 ORTHO05D009471 5.9e-20 101.7 104 52.9
MBI18_g21101_MAGBIO Magnolia biondii HOM05D007657 ORTHO05D009471 7.8e-20 101.3 169 44.4
Nn3g17815 Nelumbo nucifera HOM05D020747 ORTHO05D009471 7.8e-20 101.3 78 69.2
QL08p034229 Quercus lobata HOM05D007657 ORTHO05D009471 1.0e-19 100.9 144 41.0
Actinidia30501 Actinidia chinensis HOM05D007657 ORTHO05D009471 1.3e-19 100.5 175 38.9
Prupe.3G222500 Prunus persica HOM05D007657 ORTHO05D009471 1.3e-19 100.5 112 47.3
CiPaw.03G164200 Carya illinoinensis HOM05D007657 ORTHO05D009471 6.6e-19 98.2 136 43.4
Lsat_1_v5_gn_3_43060 Lactuca sativa HOM05D007657 ORTHO05D009471 8.6e-19 97.8 154 40.9
TPR.G30798 Trifolium pratense HOM05D007657 ORTHO05D009471 1.5e-18 97.1 106 50.0
CANSAT64G1489 Cannabis sativa HOM05D007657 ORTHO05D009471 1.9e-18 96.7 103 51.5
Cfa014460 Carpinus fangiana HOM05D007657 ORTHO05D009471 1.9e-18 96.7 103 47.6
HanXRQChr15g0479591 Helianthus annuus HOM05D007657 ORTHO05D009471 2.5e-18 96.3 163 39.9
Sopen07g026480 Solanum pennellii HOM05D007657 ORTHO05D009471 4.3e-18 95.5 117 45.3
Aqoxy7G03995 Aquilegia oxysepala HOM05D007657 ORTHO05D009471 7.3e-18 94.7 110 48.2
Cc05_g05320 Coffea canephora HOM05D007657 ORTHO05D009471 7.3e-18 94.7 110 46.4
Solyc07g052930.3 Solanum lycopersicum HOM05D007657 ORTHO05D009471 7.3e-18 94.7 117 45.3
Atru.chr6.3119 Acer truncatum HOM05D007657 ORTHO05D009471 1.2e-17 94.0 102 50.0
PGSC0003DMG400026164 Solanum tuberosum HOM05D007657 ORTHO05D009471 1.2e-17 94.0 117 45.3
Nitab4.5_0003429g0020 Nicotiana tabacum HOM05D007657 ORTHO05D009471 8.0e-17 91.3 118 44.9
Thhalv10021235m.g Eutrema salsugineum HOM05D007657 ORTHO05D009471 4.0e-16 89.0 131 40.5
SGA_v2.0_scaffold159G37602 Striga asiatica HOM05D007657 ORTHO05D009471 4.0e-16 89.0 126 42.9
HPP92_000868 Vanilla planifolia HOM05D007657 ORTHO05D009471 4.0e-16 89.0 123 43.1
COL.COLO4_13025 Corchorus olitorius HOM05D007657 ORTHO05D009471 8.9e-16 87.8 97 48.5
FAN05G3329 Fragaria x ananassa HOM05D007657 ORTHO05D009471 8.9e-16 87.8 150 38.7
RcHm_v2.0_Chr2g0160481 Rosa chinensis HOM05D007657 ORTHO05D009471 1.5e-15 87.0 165 38.2
Nn4g23029 Nelumbo nucifera HOM05D020747 ORTHO05D009471 2.0e-15 86.7 45 88.9
Peaxi162Scf00007g01411 Petunia axillaris HOM05D007657 ORTHO05D009471 2.6e-15 86.3 161 37.9
ATR0804G080 Amborella trichopoda HOM05D007657 ORTHO05D009471 3.4e-15 85.9 114 44.7
SalBow1G6397 Salvia bowleyana HOM05D007657 ORTHO05D009471 3.4e-15 85.9 124 41.9
FAN02G3547 Fragaria x ananassa HOM05D007657 ORTHO05D009471 5.8e-15 85.1 151 39.1
FAN09G3022 Fragaria x ananassa HOM05D007657 ORTHO05D009471 7.5e-15 84.7 151 39.1
Psat7g073040 Pisum sativum HOM05D007657 ORTHO05D009471 1.3e-14 84.0 80 53.8
CDE05G1372 Ceratophyllum demersum HOM05D007657 ORTHO05D009471 1.7e-14 83.6 99 45.5
Sp3g19920 Schrenkiella parvula HOM05D007657 ORTHO05D009471 2.2e-14 83.2 127 39.4
FvH4_6g43750 Fragaria vesca HOM05D007657 ORTHO05D009471 2.9e-14 82.8 152 38.2
FAN14G5828 Fragaria x ananassa HOM05D007657 ORTHO05D009471 2.9e-14 82.8 152 38.2
THA.LOC104802534 Tarenaya hassleriana HOM05D007657 ORTHO05D009471 8.3e-14 81.3 115 40.9
Carub.0003s2227 Capsella rubella HOM05D007657 ORTHO05D009471 1.4e-13 80.5 96 44.8
Aa31LG8G8650 Aethionema arabicum HOM05D007657 ORTHO05D009471 3.2e-13 79.3 172 36.0
Psat7g073080 Pisum sativum HOM05D007657 ORTHO05D009471 3.2e-13 79.3 80 51.2
BcaC05g28104 Brassica carinata HOM05D007657 ORTHO05D009471 4.1e-13 79.0 119 37.0
C05p41310 Brassica napus HOM05D007657 ORTHO05D009471 4.1e-13 79.0 119 37.0
BolC5t32872H Brassica oleracea HOM05D007657 ORTHO05D009471 4.1e-13 79.0 119 37.0
AT3G22100 Arabidopsis thaliana HOM05D007657 ORTHO05D009471 7.0e-13 78.2 95 43.2
unitig_62.g23194 Utricularia gibba HOM05D007657 ORTHO05D009471 9.2e-13 77.8 122 38.5
AL3G36280 Arabidopsis lyrata HOM05D007657 ORTHO05D009471 1.2e-12 77.4 94 43.6
Sc12g0002470 Simmondsia chinensis HOM05D007657 ORTHO05D009471 2.7e-12 76.3 117 39.3
BcaB06g26306 Brassica carinata HOM05D007657 ORTHO05D009471 7.8e-12 74.7 156 32.1
A05p26740 Brassica napus HOM05D007657 ORTHO05D009471 3.0e-11 72.8 96 40.6
SGA_v2.0_scaffold4400G54479 Striga asiatica HOM05D007657 ORTHO05D009471 3.0e-11 72.8 96 41.7
BraA05t21556Z Brassica rapa HOM05D007657 ORTHO05D009471 8.6e-11 71.2 96 39.6
BcaB04g20544 Brassica carinata HOM05D007657 ORTHO05D009471 5.6e-10 68.6 130 33.8
Migut.H01205 Erythranthe guttata HOM05D007657 ORTHO05D009471 2.3e-08 63.2 74 54.1
Nitab4.5_0001134g0150 Nicotiana tabacum HOM05D007657 ORTHO05D009471 2.0e-07 60.1 88 43.2
SEGI_20902 Sequoiadendron giganteum HOM05D000850 ORTHO05D014998 2.0e-07 60.1 75 44.0
FvH4_1g29760 Fragaria vesca HOM05D007657 ORTHO05D009471 2.6e-07 59.7 112 32.1
MBI18_g42709_MAGBIO Magnolia biondii HOM05D003734 ORTHO05D004270 2.6e-07 59.7 112 33.0
ATR0772G185 Amborella trichopoda HOM05D007657 ORTHO05D009471 7.5e-07 58.2 77 40.3
SEGI_09905 Sequoiadendron giganteum HOM05D000850 ORTHO05D014998 7.5e-07 58.2 66 43.9
TPR.G8316 Trifolium pratense HOM05D001118 ORTHO05D000266 7.5e-07 58.2 149 31.5
FAN19G0836 Fragaria x ananassa HOM05D007657 ORTHO05D009471 9.8e-07 57.8 112 31.2
PGR004G2748 Punica granatum HOM05D003734 ORTHO05D004270 2.2e-06 56.6 132 32.6
PGR038G0002 Punica granatum HOM05D003734 ORTHO05D004270 2.2e-06 56.6 132 32.6
Sabra07G0088500 Salix brachista HOM05D000850 ORTHO05D000266 2.2e-06 56.6 111 28.8
MBI18_g40231_MAGBIO Magnolia biondii HOM05D003734 ORTHO05D004270 2.9e-06 56.2 112 32.1
MBI18_g46680_MAGBIO Magnolia biondii HOM05D003734 ORTHO05D004270 2.9e-06 56.2 112 32.1
Potri.007G108000 Populus trichocarpa HOM05D000850 ORTHO05D000266 2.9e-06 56.2 81 35.8
unitig_32.g10876 Utricularia gibba HOM05D003734 ORTHO05D004270 2.9e-06 56.2 117 31.6
Duzib147G1616 Durio zibethinus HOM05D000850 ORTHO05D000266 4.9e-06 55.5 83 36.1
FAN21G1749 Fragaria x ananassa HOM05D003734 ORTHO05D004270 4.9e-06 55.5 135 32.6
SEGI_02134 Sequoiadendron giganteum HOM05D000850 ORTHO05D014998 6.4e-06 55.1 65 46.2
Aqoxy7G03787 Aquilegia oxysepala HOM05D003734 ORTHO05D004270 8.3e-06 54.7 102 41.2
COL.COLO4_22896 Corchorus olitorius HOM05D003734 ORTHO05D004270 8.3e-06 54.7 101 37.6
FAN25G3016 Fragaria x ananassa HOM05D003734 ORTHO05D004270 8.3e-06 54.7 135 34.8
PSO541G1280 Papaver somniferum HOM05D003734 ORTHO05D004270 8.3e-06 54.7 76 38.2
Potri.005G060900 Populus trichocarpa HOM05D000850 ORTHO05D000266 8.3e-06 54.7 123 29.3
SEGI_25827 Sequoiadendron giganteum HOM05D000850 ORTHO05D014998 8.3e-06 54.7 65 44.6
TAR629G0335 Trochodendron aralioides HOM05D003734 ORTHO05D004270 8.3e-06 54.7 99 37.4


User provided reference genes

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