Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0029075g0010 Nicotiana tabacum HOM05D012341 ORTHO05D014559 8.1e-141 503.8 273 100.0
Nitab4.5_0003449g0020 Nicotiana tabacum HOM05D012341 ORTHO05D014559 7.9e-136 487.3 272 97.1
Nitab4.5_0000482g0130 Nicotiana tabacum HOM05D012341 ORTHO05D014559 1.2e-99 367.1 295 74.6
Nitab4.5_0000482g0080 Nicotiana tabacum HOM05D012341 ORTHO05D014559 2.8e-85 319.3 294 67.0
Peaxi162Scf00921g00121 Petunia axillaris HOM05D012341 ORTHO05D014559 2.4e-52 209.9 299 44.5
CAN.G664.8 Capsicum annuum HOM05D012341 ORTHO05D014559 3.6e-48 196.1 310 42.9
CAN.G1861.4 Capsicum annuum HOM05D012341 ORTHO05D014559 3.6e-40 169.5 282 40.8
Sopen07g025280 Solanum pennellii HOM05D012341 ORTHO05D014559 4.6e-35 152.5 274 37.2
Sopen07g024180 Solanum pennellii HOM05D012341 ORTHO05D014559 7.8e-35 151.8 290 38.3
PGSC0003DMG400000671 Solanum tuberosum HOM05D012341 ORTHO05D014559 1.3e-34 151.0 279 41.9
Solyc07g049250.1 Solanum lycopersicum HOM05D012341 ORTHO05D014559 8.7e-34 148.3 274 41.6
Peaxi162Scf00921g00003 Petunia axillaris HOM05D012341 ORTHO05D014559 1.3e-32 144.4 165 49.7
PGSC0003DMG400006144 Solanum tuberosum HOM05D012341 ORTHO05D014559 4.8e-32 142.5 301 39.2
CAN.G664.6 Capsicum annuum HOM05D012341 ORTHO05D014559 8.1e-24 115.2 283 34.3
Peaxi162Scf00231g00246 Petunia axillaris HOM05D000007 ORTHO05D000017 1.5e-17 94.4 118 44.1
SMO119G0353 Selaginella moellendorffii HOM05D000629 ORTHO05D000576 1.6e-08 64.3 120 34.2
Dinv21339 Davidia involucrata HOM05D000629 ORTHO05D000576 6.3e-08 62.4 248 25.8
HanXRQChr14g0448871 Helianthus annuus HOM05D000629 ORTHO05D000576 6.3e-08 62.4 118 28.0
Pp3c24_13770 Physcomitrium patens HOM05D000629 ORTHO05D000576 3.1e-07 60.1 116 31.9
HanXRQChr12g0385641 Helianthus annuus HOM05D000629 ORTHO05D000576 6.9e-07 58.9 116 27.6
Manes.17G117254 Manihot esculenta HOM05D000629 ORTHO05D000576 6.9e-07 58.9 116 28.4
Cpa.g.c28922 Carica papaya HOM05D000629 ORTHO05D000576 9.0e-07 58.5 116 28.4
AUR62014568 Chenopodium quinoa HOM05D000629 ORTHO05D000576 9.0e-07 58.5 116 27.6
THA.LOC104822375 Tarenaya hassleriana HOM05D000629 ORTHO05D000576 9.0e-07 58.5 116 26.7
AUR62039393 Chenopodium quinoa HOM05D000629 ORTHO05D000576 1.2e-06 58.2 116 27.6
Pp3c24_19330 Physcomitrium patens HOM05D000629 ORTHO05D000576 1.2e-06 58.2 120 30.8
Sc11g0008010 Simmondsia chinensis HOM05D000629 ORTHO05D000576 1.2e-06 58.2 116 27.6
THA.LOC104821055 Tarenaya hassleriana HOM05D000629 ORTHO05D000576 1.5e-06 57.8 116 27.6
CARHR075690 Cardamine hirsuta HOM05D000629 ORTHO05D000576 2.6e-06 57.0 116 27.6
Sabra16G0229600 Salix brachista HOM05D000629 ORTHO05D000576 2.6e-06 57.0 116 27.6
AT5G15020 Arabidopsis thaliana HOM05D000629 ORTHO05D000576 3.4e-06 56.6 123 27.6
EL10Ac6g13094 Beta vulgaris HOM05D000629 ORTHO05D000576 3.4e-06 56.6 119 30.3
MBI15_g13425_MAGBIO Magnolia biondii HOM05D000629 ORTHO05D000576 3.4e-06 56.6 117 29.1
MBI15_g23242_MAGBIO Magnolia biondii HOM05D000629 ORTHO05D000576 4.5e-06 56.2 127 29.1
MCO01G416 Micromonas commoda HOM05D000629 ORTHO05D000576 4.5e-06 56.2 126 27.8
Pp3c8_19010 Physcomitrium patens HOM05D000629 ORTHO05D000576 4.5e-06 56.2 116 31.9
Sp6g29020 Schrenkiella parvula HOM05D000629 ORTHO05D000576 5.9e-06 55.8 116 25.9
SEGI_13294 Sequoiadendron giganteum HOM05D000629 ORTHO05D000576 5.9e-06 55.8 123 28.5
Potri.001G350200 Populus trichocarpa HOM05D000629 ORTHO05D000576 7.7e-06 55.5 116 27.6
TAR371G0714 Trochodendron aralioides HOM05D000629 ORTHO05D000576 7.7e-06 55.5 122 30.3
SMO115G0316 Selaginella moellendorffii HOM05D000629 ORTHO05D000576 1.0e-05 55.1 126 29.4


User provided reference genes

Program Settings