Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0026472g0010 Nicotiana tabacum HOM05D003893 ORTHO05D005167 4.4e-175 617.8 312 100.0
CAN.G572.10 Capsicum annuum HOM05D003893 ORTHO05D005167 7.2e-125 451.1 433 59.6
Peaxi162Scf00301g00417 Petunia axillaris HOM05D003893 ORTHO05D005167 9.3e-125 450.7 432 60.6
Solyc08g077850.2 Solanum lycopersicum HOM05D003893 ORTHO05D005167 5.7e-122 441.4 433 59.8
Sopen08g026360 Solanum pennellii HOM05D003893 ORTHO05D005167 5.7e-122 441.4 433 60.0
Nitab4.5_0000500g0300 Nicotiana tabacum HOM05D003893 ORTHO05D005167 3.1e-112 409.1 313 71.6
Oeu054285.1 Olea europaea HOM05D003893 ORTHO05D005167 1.4e-59 234.2 438 38.1
Atru.chr9.1207 Acer truncatum HOM05D003893 ORTHO05D005167 2.3e-59 233.4 436 38.5
Lj8C277G4 Lonicera japonica HOM05D003893 ORTHO05D005167 4.4e-58 229.2 411 38.9
Dinv25135 Davidia involucrata HOM05D003893 ORTHO05D005167 6.4e-57 225.3 435 36.8
Manes.01G088800 Manihot esculenta HOM05D003893 ORTHO05D005167 6.4e-57 225.3 435 36.3
Actinidia25908 Actinidia chinensis HOM05D003893 ORTHO05D005167 4.6e-55 219.2 441 34.9
CSS0002187 Camellia sinensis var. sinensis HOM05D003893 ORTHO05D005167 6.0e-55 218.8 456 35.5
TAR375G0027 Trochodendron aralioides HOM05D003893 ORTHO05D005167 5.1e-54 215.7 429 35.2
Eucgr.E00353 Eucalyptus grandis HOM05D003893 ORTHO05D005167 2.1e-52 210.3 412 36.4
Prupe.5G055400 Prunus persica HOM05D003893 ORTHO05D005167 2.1e-52 210.3 433 36.7
MSTRG.1953 Avicennia marina HOM05D003893 ORTHO05D005167 1.4e-51 207.6 436 33.9
Potri.001G150900 Populus trichocarpa HOM05D003893 ORTHO05D005167 1.4e-51 207.6 436 35.8
Cfa012326 Carpinus fangiana HOM05D003893 ORTHO05D005167 3.1e-51 206.5 431 36.2
Thecc.03G240200 Theobroma cacao HOM05D003893 ORTHO05D005167 4.0e-51 206.1 436 36.2
Lalb_Chr09g0329781 Lupinus albus HOM05D003893 ORTHO05D005167 5.2e-51 205.7 429 34.5
MD04G1055600 Malus domestica HOM05D003893 ORTHO05D005167 5.2e-51 205.7 437 36.4
SGA_v2.0_scaffold20G09254 Striga asiatica HOM05D003893 ORTHO05D005167 6.8e-51 205.3 441 34.2
Sabra01G0120900 Salix brachista HOM05D003893 ORTHO05D005167 8.9e-51 204.9 436 35.6
Migut.E01633 Erythranthe guttata HOM05D003893 ORTHO05D005167 1.2e-50 204.5 437 34.8
QL12p008764 Quercus lobata HOM05D003893 ORTHO05D005167 1.5e-50 204.1 430 34.7
Duzib205G1731 Durio zibethinus HOM05D003893 ORTHO05D005167 2.0e-50 203.8 424 35.8
Glyma.17G148200 Glycine max HOM05D003893 ORTHO05D005167 7.6e-50 201.8 428 33.6
Ciclev10024446m.g Citrus clementina HOM05D003893 ORTHO05D005167 2.9e-49 199.9 431 33.4
Lsat_1_v5_gn_6_67000 Lactuca sativa HOM05D003893 ORTHO05D005167 8.4e-49 198.4 394 36.5
DCAR_005586 Daucus carota HOM05D003893 ORTHO05D005167 5.4e-48 195.7 435 32.9
FvH4_5g20370 Fragaria vesca HOM05D003893 ORTHO05D005167 2.1e-47 193.7 431 35.7
FAN18G3472 Fragaria x ananassa HOM05D003893 ORTHO05D005167 2.1e-47 193.7 431 35.7
PGR042G1290 Punica granatum HOM05D003893 ORTHO05D005167 2.1e-47 193.7 432 35.4
RcHm_v2.0_Chr7g0205631 Rosa chinensis HOM05D003893 ORTHO05D005167 2.1e-47 193.7 433 35.3
CANSAT21G1178 Cannabis sativa HOM05D003893 ORTHO05D005167 2.7e-47 193.4 434 35.0
Medtr4g099300 Medicago truncatula HOM05D003893 ORTHO05D005167 1.0e-46 191.4 432 33.6
FAN08G3381 Fragaria x ananassa HOM05D003893 ORTHO05D005167 1.3e-46 191.0 431 35.3
Psat4g076000 Pisum sativum HOM05D003893 ORTHO05D005167 1.3e-46 191.0 430 32.8
vmacro17755 Vaccinium macrocarpon HOM05D003893 ORTHO05D005167 1.3e-46 191.0 469 32.6
arahy.Tifrunner.gnm1.ann1.763U0W Arachis hypogaea HOM05D003893 ORTHO05D005167 3.0e-46 189.9 426 32.6
TPR.G25755 Trifolium pratense HOM05D003893 ORTHO05D005167 5.1e-46 189.1 429 32.9
arahy.Tifrunner.gnm1.ann1.TA1JJE Arachis hypogaea HOM05D003893 ORTHO05D005167 1.1e-45 188.0 426 32.4
PSO675G1423 Papaver somniferum HOM05D003893 ORTHO05D005167 1.5e-45 187.6 427 33.7
PSO732G0344 Papaver somniferum HOM05D003893 ORTHO05D005167 1.5e-45 187.6 427 33.7
Gohir.A12G212800 Gossypium hirsutum HOM05D003893 ORTHO05D005167 5.6e-45 185.7 436 34.6
Phvul.003G225400 Phaseolus vulgaris HOM05D003893 ORTHO05D005167 7.3e-45 185.3 429 32.6
Rhsim11G0002100 Rhododendron simsii HOM05D003893 ORTHO05D005167 1.2e-44 184.5 443 33.6
Sc07g0009060 Simmondsia chinensis HOM05D003893 ORTHO05D005167 1.2e-44 184.5 428 31.3
Lj4g0018101 Lotus japonicus HOM05D003893 ORTHO05D005167 2.1e-44 183.7 429 31.7
SalBow1G6370 Salvia bowleyana HOM05D003893 ORTHO05D005167 3.6e-44 183.0 441 31.5
Gorai.008G230900 Gossypium raimondii HOM05D003893 ORTHO05D005167 1.1e-43 181.4 433 34.2
Gohir.D12G215300 Gossypium hirsutum HOM05D003893 ORTHO05D005167 1.4e-43 181.0 433 34.2
THA.LOC104798352 Tarenaya hassleriana HOM05D003893 ORTHO05D005167 1.4e-43 181.0 419 33.4
Sed0003705 Sechium edule HOM05D003893 ORTHO05D005167 1.8e-43 180.6 421 33.0
CiPaw.11G072600 Carya illinoinensis HOM05D003893 ORTHO05D005167 2.4e-43 180.3 380 35.0
HanXRQChr16g0504541 Helianthus annuus HOM05D003893 ORTHO05D005167 2.4e-43 180.3 393 34.9
GSVIVG01003688001 Vitis vinifera HOM05D003893 ORTHO05D005167 1.2e-42 177.9 305 39.3
CsaV3_3G002270 Cucumis sativus L. HOM05D003893 ORTHO05D005167 1.5e-42 177.6 434 33.2
Cc08_g11340 Coffea canephora HOM05D003893 ORTHO05D005167 2.2e-41 173.7 355 36.9
MELO3C013898.2 Cucumis melo HOM05D003893 ORTHO05D005167 4.9e-41 172.6 434 33.6
AUR62007166 Chenopodium quinoa HOM05D003893 ORTHO05D005167 1.1e-40 171.4 418 30.6
ECA233G0269 Erigeron canadensis HOM05D003893 ORTHO05D005167 3.2e-40 169.9 428 31.3
Sp7g16550 Schrenkiella parvula HOM05D003893 ORTHO05D005167 1.2e-39 167.9 434 30.4
Thhalv10024195m.g Eutrema salsugineum HOM05D003893 ORTHO05D005167 1.6e-39 167.5 432 31.5
BraA01t00910Z Brassica rapa HOM05D003893 ORTHO05D005167 2.1e-39 167.2 418 32.1
CARHR224310 Cardamine hirsuta HOM05D003893 ORTHO05D005167 2.7e-39 166.8 428 32.2
EL10Ac5g12271 Beta vulgaris HOM05D003893 ORTHO05D005167 7.8e-39 165.2 431 29.9
C01p11280 Brassica napus HOM05D003893 ORTHO05D005167 1.3e-38 164.5 433 31.2
Ah.07g199160 Amaranthus hybridus HOM05D003893 ORTHO05D005167 1.7e-38 164.1 434 28.3
BcaC09g51627 Brassica carinata HOM05D003893 ORTHO05D005167 1.7e-38 164.1 432 31.2
Ca_22016_v3 Cicer arietinum L. HOM05D003893 ORTHO05D005167 2.3e-38 163.7 465 31.0
Ca_30504_v3 Cicer arietinum L. HOM05D003893 ORTHO05D005167 2.3e-38 163.7 465 31.0
VMungo0251G3747 Vigna mungo HOM05D003893 ORTHO05D005167 2.3e-38 163.7 464 29.7
Carub.0007s2378 Capsella rubella HOM05D003893 ORTHO05D005167 3.0e-38 163.3 431 30.9
AL7G36990 Arabidopsis lyrata HOM05D003893 ORTHO05D005167 8.7e-38 161.8 433 31.2
A01p09670 Brassica napus HOM05D003893 ORTHO05D005167 1.5e-37 161.0 433 30.9
AT4G17610 Arabidopsis thaliana HOM05D003893 ORTHO05D005167 1.9e-37 160.6 432 31.5
BcaNung00076 Brassica carinata HOM05D003893 ORTHO05D005167 9.6e-37 158.3 432 30.3
Hund14479 Selenicereus undatus HOM05D003893 ORTHO05D005167 9.6e-37 158.3 433 29.6
Aqoxy5G02623 Aquilegia oxysepala HOM05D003893 ORTHO05D005167 1.3e-36 157.9 424 30.2
COL.COLO4_07201 Corchorus olitorius HOM05D003893 ORTHO05D005167 1.3e-36 157.9 420 33.6
BolC1t01093H Brassica oleracea HOM05D003893 ORTHO05D005167 4.8e-36 156.0 455 29.7
AUR62018840 Chenopodium quinoa HOM05D003893 ORTHO05D005167 2.4e-35 153.7 420 29.0
Zm00001eb000190 Zea mays HOM05D003893 ORTHO05D005167 2.4e-32 143.7 415 30.8
Aa31LG6G350 Aethionema arabicum HOM05D003893 ORTHO05D005167 5.4e-32 142.5 431 29.9
Haze_08367 Corylus avellana HOM05D003893 ORTHO05D005167 1.8e-27 127.5 153 51.0
unitig_21.g20369 Utricularia gibba HOM05D003893 ORTHO05D005167 5.1e-22 109.4 311 29.3
CDE12G0047 Ceratophyllum demersum HOM05D003893 ORTHO05D005167 1.6e-20 104.4 333 25.5
Psat7g156960 Pisum sativum HOM05D003893 ORTHO05D005167 4.0e-19 99.8 293 27.6
ClCG10G002230 Citrullus lanatus HOM05D003893 ORTHO05D005167 2.0e-18 97.4 207 37.2
ATR0665G346 Amborella trichopoda HOM05D003893 ORTHO05D005167 2.9e-17 93.6 131 42.7
Mapoly0105s0045 Marchantia polymorpha HOM05D003893 ORTHO05D005167 1.1e-16 91.7 402 25.1
SalBow1G5499 Salvia bowleyana HOM05D003893 ORTHO05D005167 1.9e-16 90.9 148 39.9
Cpa.g.sc98.30 Carica papaya HOM05D003893 ORTHO05D005167 5.7e-13 79.3 88 48.9
Haze_08366 Corylus avellana HOM05D003893 ORTHO05D005167 4.2e-08 63.2 82 47.6


User provided reference genes

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