Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0025955g0010 Nicotiana tabacum HOM05D004826 ORTHO05D006367 5.2e-102 374.4 190 100.0
Nitab4.5_0005696g0030 Nicotiana tabacum HOM05D004826 ORTHO05D006367 1.5e-80 303.1 159 95.6
Solyc06g008700.3 Solanum lycopersicum HOM05D004826 ORTHO05D006367 1.5e-64 250.0 245 60.8
PGSC0003DMG400005331 Solanum tuberosum HOM05D004826 ORTHO05D006367 5.6e-64 248.1 245 60.4
Sopen06g003480 Solanum pennellii HOM05D004826 ORTHO05D006367 1.6e-63 246.5 245 60.4
Peaxi162Scf00572g00217 Petunia axillaris HOM05D004826 ORTHO05D006367 4.8e-55 218.4 241 55.2
Dinv34775 Davidia involucrata HOM05D004826 ORTHO05D006367 1.3e-44 183.7 243 46.9
Hma1.2p1_0822F.1_g224310 Hydrangea macrophylla HOM05D004826 ORTHO05D006367 3.8e-44 182.2 246 47.2
Lj1A48T56 Lonicera japonica HOM05D004826 ORTHO05D006367 6.4e-44 181.4 247 48.6
Hma1.2p1_0822F.1_g224300 Hydrangea macrophylla HOM05D004826 ORTHO05D006367 4.2e-43 178.7 243 46.5
GSVIVG01001175001 Vitis vinifera HOM05D004826 ORTHO05D006367 1.3e-41 173.7 243 42.8
Cc01_g19270 Coffea canephora HOM05D004826 ORTHO05D006367 3.9e-41 172.2 245 43.7
Actinidia24908 Actinidia chinensis HOM05D004826 ORTHO05D006367 1.3e-39 167.2 241 42.7
ECA236G2315 Erigeron canadensis HOM05D004826 ORTHO05D006367 3.7e-39 165.6 239 42.7
MSTRG.18248 Avicennia marina HOM05D004826 ORTHO05D006367 4.8e-39 165.2 239 44.8
CSS0031998 Camellia sinensis var. sinensis HOM05D004826 ORTHO05D006367 4.8e-39 165.2 240 43.8
DCAR_002720 Daucus carota HOM05D004826 ORTHO05D006367 1.1e-38 164.1 234 42.3
Manes.05G079700 Manihot esculenta HOM05D004826 ORTHO05D006367 1.1e-38 164.1 242 41.7
TWI75G1621 Tripterygium wilfordii HOM05D004826 ORTHO05D006367 1.1e-38 164.1 238 42.4
MD11G1282600 Malus domestica HOM05D004826 ORTHO05D006367 1.4e-38 163.7 242 40.5
CSS0030159 Camellia sinensis var. sinensis HOM05D004826 ORTHO05D006367 1.8e-38 163.3 240 43.3
TAR633G1509 Trochodendron aralioides HOM05D004826 ORTHO05D006367 1.8e-38 163.3 242 44.6
Prupe.8G238200 Prunus persica HOM05D004826 ORTHO05D006367 5.3e-38 161.8 242 40.5
Ciclev10020269m.g Citrus clementina HOM05D004826 ORTHO05D006367 9.0e-38 161.0 241 41.1
Migut.D00320 Erythranthe guttata HOM05D004826 ORTHO05D006367 1.5e-37 160.2 245 41.6
Psat3g063080 Pisum sativum HOM05D004826 ORTHO05D006367 2.0e-37 159.8 237 42.2
SalBow4G1440 Salvia bowleyana HOM05D004826 ORTHO05D006367 3.4e-37 159.1 241 43.6
Glyma.03G155900 Glycine max HOM05D004826 ORTHO05D006367 7.6e-37 157.9 235 42.1
COL.COLO4_09064 Corchorus olitorius HOM05D004826 ORTHO05D003095 1.3e-36 157.1 242 40.5
CANSAT25G1434 Cannabis sativa HOM05D004826 ORTHO05D006367 2.9e-36 156.0 240 40.8
HanXRQChr04g0118961 Helianthus annuus HOM05D004826 ORTHO05D006367 2.9e-36 156.0 239 40.6
Oeu025741.1 Olea europaea HOM05D004826 ORTHO05D006367 2.9e-36 156.0 240 43.3
QL12p021024 Quercus lobata HOM05D004826 ORTHO05D006367 2.9e-36 156.0 239 40.6
Potri.005G211600 Populus trichocarpa HOM05D004826 ORTHO05D006367 3.8e-36 155.6 242 38.0
A09p68350 Brassica napus HOM05D004826 ORTHO05D002453 1.1e-35 154.1 228 42.1
Gohir.A12G004300 Gossypium hirsutum HOM05D004826 ORTHO05D006367 1.4e-35 153.7 239 41.0
Lj1g0007005 Lotus japonicus HOM05D004826 ORTHO05D006367 1.4e-35 153.7 234 41.5
Aqoxy5G00445 Aquilegia oxysepala HOM05D004826 ORTHO05D006367 2.5e-35 152.9 241 39.8
Ca_08614_v3 Cicer arietinum L. HOM05D004826 ORTHO05D006367 4.2e-35 152.1 237 40.1
Duzib138G1281 Durio zibethinus HOM05D004826 ORTHO05D006367 5.5e-35 151.8 239 41.0
Gorai.008G003800 Gossypium raimondii HOM05D004826 ORTHO05D006367 5.5e-35 151.8 239 40.6
arahy.Tifrunner.gnm1.ann1.HM2HLZ Arachis hypogaea HOM05D004826 ORTHO05D006367 9.3e-35 151.0 235 40.9
BraA09t42171Z Brassica rapa HOM05D004826 ORTHO05D002453 1.2e-34 150.6 230 41.7
EL10Ac5g10541 Beta vulgaris HOM05D004826 ORTHO05D006367 1.6e-34 150.2 243 42.4
CDE06G0967 Ceratophyllum demersum HOM05D004826 ORTHO05D006367 1.6e-34 150.2 234 40.2
Glyma.19G158200 Glycine max HOM05D004826 ORTHO05D006367 2.1e-34 149.8 235 40.4
Gohir.D12G004000 Gossypium hirsutum HOM05D004826 ORTHO05D006367 2.1e-34 149.8 239 40.2
RcHm_v2.0_Chr6g0290561 Rosa chinensis HOM05D004826 ORTHO05D006367 4.6e-34 148.7 243 38.7
Sabra05G0161700 Salix brachista HOM05D004826 ORTHO05D006367 4.6e-34 148.7 216 41.7
Medtr7g095190 Medicago truncatula HOM05D004826 ORTHO05D006367 6.0e-34 148.3 237 40.5
BolC8t52808H Brassica oleracea HOM05D004826 ORTHO05D002453 7.9e-34 147.9 209 43.5
Lalb_Chr01g0020091 Lupinus albus HOM05D004826 ORTHO05D006367 7.9e-34 147.9 239 41.0
arahy.Tifrunner.gnm1.ann1.ZSCD81 Arachis hypogaea HOM05D004826 ORTHO05D006367 1.0e-33 147.5 244 39.3
FAN20G2615 Fragaria x ananassa HOM05D004826 ORTHO05D006367 1.3e-33 147.1 241 39.4
BraA10t42449Z Brassica rapa HOM05D004826 ORTHO05D006367 1.8e-33 146.7 205 42.9
MD03G1261900 Malus domestica HOM05D004826 ORTHO05D006367 1.8e-33 146.7 210 43.8
TPR.G24327 Trifolium pratense HOM05D004826 ORTHO05D006367 1.8e-33 146.7 237 39.7
Thecc.01G275300 Theobroma cacao HOM05D004826 ORTHO05D006367 3.0e-33 146.0 240 40.4
C08p52920 Brassica napus HOM05D004826 ORTHO05D002453 5.1e-33 145.2 203 42.4
BolC8t46840H Brassica oleracea HOM05D004826 ORTHO05D006367 5.1e-33 145.2 230 38.3
FAN15G0865 Fragaria x ananassa HOM05D004826 ORTHO05D006367 8.7e-33 144.4 241 39.4
CiPaw.07G089800 Carya illinoinensis HOM05D004826 ORTHO05D006367 1.1e-32 144.1 244 39.8
FvH4_2g23260 Fragaria vesca HOM05D004826 ORTHO05D006367 1.1e-32 144.1 241 39.0
FAN27G1728 Fragaria x ananassa HOM05D004826 ORTHO05D006367 1.1e-32 144.1 241 38.6
BcaC07g42266 Brassica carinata HOM05D004826 ORTHO05D002453 1.5e-32 143.7 228 39.9
A10p01740 Brassica napus HOM05D004826 ORTHO05D006367 1.5e-32 143.7 220 40.0
PSO832G3843 Papaver somniferum HOM05D004826 ORTHO05D006367 1.9e-32 143.3 244 40.2
BraA08t35646Z Brassica rapa HOM05D004826 ORTHO05D006367 2.5e-32 142.9 230 37.8
AUR62028599 Chenopodium quinoa HOM05D004826 ORTHO05D006367 7.4e-32 141.4 244 40.6
vmacro14910 Vaccinium macrocarpon HOM05D004826 ORTHO05D006367 7.4e-32 141.4 267 37.8
Eucgr.K03351 Eucalyptus grandis HOM05D004826 ORTHO05D006367 9.6e-32 141.0 238 39.1
Sc17g0001330 Simmondsia chinensis HOM05D004826 ORTHO05D006367 9.6e-32 141.0 240 38.3
VMungo1383G1287 Vigna mungo HOM05D004826 ORTHO05D006367 9.6e-32 141.0 234 40.2
PSO210G5512 Papaver somniferum HOM05D004826 ORTHO05D006367 1.3e-31 140.6 244 39.8
FAN24G0969 Fragaria x ananassa HOM05D004826 ORTHO05D006367 2.8e-31 139.4 241 38.6
Cpa.g.sc2545.1 Carica papaya HOM05D004826 ORTHO05D006367 3.7e-31 139.0 277 36.8
Phvul.001G153300 Phaseolus vulgaris HOM05D004826 ORTHO05D006367 3.7e-31 139.0 235 39.1
AUR62032326 Chenopodium quinoa HOM05D004826 ORTHO05D006367 6.3e-31 138.3 246 39.8
Rhsim01G0273300 Rhododendron simsii HOM05D004826 ORTHO05D006367 1.4e-30 137.1 243 39.5
THA.LOC104801247 Tarenaya hassleriana HOM05D004826 ORTHO05D006367 1.4e-30 137.1 243 36.6
ClCG09G007220 Citrullus lanatus HOM05D004826 ORTHO05D006367 1.8e-30 136.7 244 38.1
AL1G12580 Arabidopsis lyrata HOM05D004826 ORTHO05D006367 2.4e-30 136.3 235 37.9
A08p37480 Brassica napus HOM05D004826 ORTHO05D006367 3.1e-30 136.0 230 36.5
C05p01720 Brassica napus HOM05D004826 ORTHO05D006367 1.2e-29 134.0 231 38.5
C08p00410 Brassica napus HOM05D004826 ORTHO05D006367 1.5e-29 133.7 230 36.5
Haze_04685 Corylus avellana HOM05D004826 ORTHO05D006367 2.6e-29 132.9 242 36.8
Thhalv10007706m.g Eutrema salsugineum HOM05D004826 ORTHO05D006367 2.6e-29 132.9 236 37.7
AT1G03110 Arabidopsis thaliana HOM05D004826 ORTHO05D006367 4.5e-29 132.1 233 36.5
MELO3C015814.2 Cucumis melo HOM05D004826 ORTHO05D006367 5.9e-29 131.7 240 37.5
CsaV3_7G027950 Cucumis sativus L. HOM05D004826 ORTHO05D006367 5.9e-29 131.7 240 37.5
Sp1g02120 Schrenkiella parvula HOM05D004826 ORTHO05D006367 1.7e-28 130.2 232 38.8
Os03g0746800 Oryza sativa ssp. japonica HOM05D004826 ORTHO05D006367 1.4e-27 127.1 245 36.7
Carub.0001s0225 Capsella rubella HOM05D004826 ORTHO05D006367 5.5e-27 125.2 234 35.0
CARHR002460 Cardamine hirsuta HOM05D004826 ORTHO05D006367 1.2e-26 124.0 233 35.2
Sed0001689 Sechium edule HOM05D004826 ORTHO05D006367 1.2e-26 124.0 229 38.4
Aa31LG1G9410 Aethionema arabicum HOM05D004826 ORTHO05D006367 1.0e-25 120.9 253 33.6
Ca_08622_v3 Cicer arietinum L. HOM05D004826 ORTHO05D006367 5.7e-24 115.2 193 38.3
Zm00001eb215000 Zea mays HOM05D004826 ORTHO05D006367 7.4e-24 114.8 245 34.7
Lsat_1_v5_gn_8_56761 Lactuca sativa HOM05D004826 ORTHO05D006367 4.8e-23 112.1 243 33.3
Nn1g02359 Nelumbo nucifera HOM05D004826 ORTHO05D006367 4.8e-23 112.1 122 50.8
HPP92_006117 Vanilla planifolia HOM05D004826 ORTHO05D006367 1.4e-22 110.5 212 35.8
PGR044G1874 Punica granatum HOM05D004826 ORTHO05D006367 6.9e-22 108.2 238 34.5
BolC5t28951H Brassica oleracea HOM05D004826 ORTHO05D006367 2.6e-21 106.3 192 40.6
MBI05_g20783_MAGBIO Magnolia biondii HOM05D004826 ORTHO05D006367 4.5e-21 105.5 206 38.8
Ah.02g110880 Amaranthus hybridus HOM05D004826 ORTHO05D006367 8.5e-20 101.3 209 37.3
SGA_v2.0_scaffold138G35320 Striga asiatica HOM05D004826 ORTHO05D006367 8.5e-20 101.3 160 41.2
ATR0665G626 Amborella trichopoda HOM05D004826 ORTHO05D006367 2.1e-18 96.7 104 51.0
SEGI_35891 Sequoiadendron giganteum HOM05D004826 ORTHO05D006367 2.7e-18 96.3 253 30.8
RcHm_v2.0_Chr6g0290571 Rosa chinensis HOM05D004826 ORTHO05D006367 2.3e-17 93.2 81 53.1
Mapoly0048s0007 Marchantia polymorpha HOM05D004826 ORTHO05D006367 9.7e-16 87.8 254 31.9
Hund02828 Selenicereus undatus HOM05D004826 ORTHO05D006367 6.9e-14 81.6 77 58.4
Hund27937 Selenicereus undatus HOM05D004826 ORTHO05D006367 6.9e-14 81.6 77 58.4
unitig_0.g133 Utricularia gibba HOM05D004826 ORTHO05D006367 1.2e-13 80.9 114 39.5
SMO358G0471 Selaginella moellendorffii HOM05D004826 ORTHO05D006367 3.4e-13 79.3 233 30.9
Actinidia21127 Actinidia chinensis HOM05D004826 ORTHO05D006367 1.7e-12 77.0 199 32.2
SGA_v2.0_scaffold1G00502 Striga asiatica HOM05D004826 ORTHO05D006367 6.5e-12 75.1 96 52.1
AagrBONN_evm.TU.Sc2ySwM_228.3229 Anthoceros agrestis HOM05D011762 ORTHO05D014803 4.2e-11 72.4 262 27.9
QL12p021035 Quercus lobata HOM05D004826 ORTHO05D006367 7.9e-10 68.2 188 32.4
C01p00020 Brassica napus HOM05D004826 ORTHO05D006367 1.4e-09 67.4 118 36.4
SHI16389 Sapria himalayana HOM05D000105 ORTHO05D000023 2.3e-09 66.6 44 61.4
BcaNung01310 Brassica carinata HOM05D004826 ORTHO05D006367 3.0e-09 66.2 118 35.6
BolC1t00008H Brassica oleracea HOM05D004826 ORTHO05D006367 3.0e-09 66.2 118 35.6
Pp3c3_10370 Physcomitrium patens HOM05D004826 ORTHO05D006367 3.0e-09 66.2 231 29.0
Atru.chr5.1473 Acer truncatum HOM05D004826 ORTHO05D006367 5.1e-09 65.5 43 65.1
CDE07G1977 Ceratophyllum demersum HOM05D003852 ORTHO05D003095 5.7e-08 62.0 58 58.6
BcaNung01308 Brassica carinata HOM05D004826 ORTHO05D006367 3.7e-07 59.3 157 31.8
Oeu040654.1 Olea europaea HOM05D004826 ORTHO05D006367 8.2e-07 58.2 66 48.5


User provided reference genes

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