Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0025014g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 1.5e-98 362.8 179 100.0
Nitab4.5_0000685g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 4.0e-88 328.2 167 95.8
Peaxi162Scf00170g01111 Petunia axillaris HOM05D006814 ORTHO05D008613 1.2e-84 316.6 167 91.6
PGSC0003DMG400014801 Solanum tuberosum HOM05D006814 ORTHO05D008613 5.6e-82 307.8 167 89.8
Solyc08g076610.4 Solanum lycopersicum HOM05D006814 ORTHO05D008613 1.6e-81 306.2 167 89.2
Sopen08g025160 Solanum pennellii HOM05D006814 ORTHO05D008613 1.6e-81 306.2 167 89.2
CAN.G298.54 Capsicum annuum HOM05D006814 ORTHO05D008613 2.4e-80 302.4 167 88.6
CSS0047525 Camellia sinensis var. sinensis HOM05D006814 ORTHO05D008613 1.2e-79 300.1 167 85.0
Dinv28983 Davidia involucrata HOM05D006814 ORTHO05D008613 4.4e-79 298.1 167 85.6
Actinidia03355 Actinidia chinensis HOM05D006814 ORTHO05D008613 4.9e-78 294.7 167 85.0
Lsat_1_v5_gn_3_19041 Lactuca sativa HOM05D006814 ORTHO05D008613 6.4e-78 294.3 167 83.2
HanXRQChr17g0538211 Helianthus annuus HOM05D006814 ORTHO05D008613 1.1e-77 293.5 167 83.2
HanXRQChr17g0538231 Helianthus annuus HOM05D006814 ORTHO05D008613 1.1e-77 293.5 167 83.2
Thecc.03G307100 Theobroma cacao HOM05D006814 ORTHO05D008613 2.4e-77 292.4 167 83.2
Ciclev10032236m.g Citrus clementina HOM05D006814 ORTHO05D008613 3.2e-77 292.0 167 82.6
CiPaw.11G097800 Carya illinoinensis HOM05D006814 ORTHO05D008613 5.4e-77 291.2 167 83.2
Gohir.A08G154800 Gossypium hirsutum HOM05D006814 ORTHO05D008613 7.1e-77 290.8 167 83.2
Gohir.D08G175300 Gossypium hirsutum HOM05D006814 ORTHO05D008613 7.1e-77 290.8 167 83.2
Manes.02G107600 Manihot esculenta HOM05D006814 ORTHO05D008613 7.1e-77 290.8 167 83.2
Rhsim11G0018900 Rhododendron simsii HOM05D006814 ORTHO05D008613 9.3e-77 290.4 167 82.0
TAR629G1931 Trochodendron aralioides HOM05D006814 ORTHO05D008613 9.3e-77 290.4 167 83.8
PGR031G2224 Punica granatum HOM05D006814 ORTHO05D008613 1.6e-76 289.7 167 81.4
Duzib205G0392 Durio zibethinus HOM05D006814 ORTHO05D008613 2.1e-76 289.3 167 83.2
Cpa.g.sc87.105 Carica papaya HOM05D006814 ORTHO05D008613 2.7e-76 288.9 167 81.4
Cfa012484 Carpinus fangiana HOM05D006814 ORTHO05D008613 2.7e-76 288.9 167 82.6
CiPaw.11G096600 Carya illinoinensis HOM05D006814 ORTHO05D008613 2.7e-76 288.9 167 82.6
Potri.001G139100 Populus trichocarpa HOM05D006814 ORTHO05D008613 3.5e-76 288.5 167 82.0
Hma1.2p1_0586F.1_g183880 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 6.0e-76 287.7 167 83.2
Cc08_g03190 Coffea canephora HOM05D006814 ORTHO05D008613 1.3e-75 286.6 169 82.8
Gorai.004G183200 Gossypium raimondii HOM05D006814 ORTHO05D008613 1.3e-75 286.6 167 82.0
Sabra01G0108000 Salix brachista HOM05D006814 ORTHO05D008613 1.3e-75 286.6 167 81.4
vmacro00308 Vaccinium macrocarpon HOM05D006814 ORTHO05D008613 1.3e-75 286.6 160 85.6
Nn1g02991 Nelumbo nucifera HOM05D006814 ORTHO05D008613 2.3e-75 285.8 167 82.0
Sed0016076 Sechium edule HOM05D006814 ORTHO05D008613 3.0e-75 285.4 167 81.4
TWI60G0232 Tripterygium wilfordii HOM05D006814 ORTHO05D008613 3.9e-75 285.0 167 79.6
FAN04G0609 Fragaria x ananassa HOM05D006814 ORTHO05D008613 5.6e-74 281.2 170 80.6
FAN08G0276 Fragaria x ananassa HOM05D006814 ORTHO05D008613 5.6e-74 281.2 170 80.6
MD11G1183600 Malus domestica HOM05D006814 ORTHO05D008613 7.3e-74 280.8 167 78.4
Aqoxy4G00304 Aquilegia oxysepala HOM05D006814 ORTHO05D008613 1.6e-73 279.6 167 79.0
Hund14354 Selenicereus undatus HOM05D006814 ORTHO05D008613 1.6e-73 279.6 167 79.0
CsaV3_4G012030 Cucumis sativus L. HOM05D006814 ORTHO05D008613 2.8e-73 278.9 167 79.0
Atru.chr6.1626 Acer truncatum HOM05D006814 ORTHO05D008613 3.6e-73 278.5 167 79.0
FAN18G2202 Fragaria x ananassa HOM05D006814 ORTHO05D008613 3.6e-73 278.5 170 79.4
GSVIVG01013112001 Vitis vinifera HOM05D006814 ORTHO05D008613 3.6e-73 278.5 167 82.0
Aa31LG9G8590 Aethionema arabicum HOM05D006814 ORTHO05D008613 4.8e-73 278.1 166 78.3
FAN18G0582 Fragaria x ananassa HOM05D006814 ORTHO05D008613 4.8e-73 278.1 170 79.4
Aa31LG6G500 Aethionema arabicum HOM05D006814 ORTHO05D008613 6.2e-73 277.7 166 78.3
MELO3C008839.2 Cucumis melo HOM05D006814 ORTHO05D008613 6.2e-73 277.7 167 78.4
RcHm_v2.0_Chr7g0211071 Rosa chinensis HOM05D006814 ORTHO05D008613 6.2e-73 277.7 159 82.4
FvH4_5g22650 Fragaria vesca HOM05D006814 ORTHO05D008613 8.1e-73 277.3 170 78.8
CANSAT21G0682 Cannabis sativa HOM05D006814 ORTHO05D008613 1.1e-72 276.9 163 81.0
Lj8A305G45 Lonicera japonica HOM05D006814 ORTHO05D008613 1.8e-72 276.2 167 81.4
Oeu005300.2 Olea europaea HOM05D006814 ORTHO05D008613 3.1e-72 275.4 158 82.3
AUR62007326 Chenopodium quinoa HOM05D006814 ORTHO05D008613 4.0e-72 275.0 157 84.1
AL7G36810 Arabidopsis lyrata HOM05D006814 ORTHO05D008613 5.3e-72 274.6 166 75.9
MSTRG.24841 Avicennia marina HOM05D006814 ORTHO05D008613 1.2e-71 273.5 170 77.6
Migut.A01081 Erythranthe guttata HOM05D006814 ORTHO05D008613 1.2e-71 273.5 171 76.0
Carub.0007s2360 Capsella rubella HOM05D006814 ORTHO05D008613 1.5e-71 273.1 166 75.3
HPP92_020943 Vanilla planifolia HOM05D003640 ORTHO05D008613 1.5e-71 273.1 167 77.8
BcaNung04035 Brassica carinata HOM05D006814 ORTHO05D008613 3.4e-71 271.9 166 76.5
CARHR224480 Cardamine hirsuta HOM05D006814 ORTHO05D008613 4.5e-71 271.6 166 75.3
A03p50690 Brassica napus HOM05D006814 ORTHO05D008613 7.6e-71 270.8 166 75.9
BraA03t14161Z Brassica rapa HOM05D006814 ORTHO05D008613 7.6e-71 270.8 166 75.9
DCAR_032083 Daucus carota HOM05D006814 ORTHO05D008613 7.6e-71 270.8 167 77.8
PSO063G6077 Papaver somniferum HOM05D006814 ORTHO05D008613 1.3e-70 270.0 167 74.9
ClCG04G005520 Citrullus lanatus HOM05D006814 ORTHO05D008613 1.7e-70 269.6 184 72.3
Thhalv10025847m.g Eutrema salsugineum HOM05D006814 ORTHO05D008613 1.7e-70 269.6 166 75.3
SGA_v2.0_scaffold36G14306 Striga asiatica HOM05D006814 ORTHO05D008613 1.7e-70 269.6 161 82.0
BcaC06g33591 Brassica carinata HOM05D006814 ORTHO05D008613 2.9e-70 268.9 166 75.9
BolC7t45420H Brassica oleracea HOM05D006814 ORTHO05D008613 2.9e-70 268.9 166 75.9
Eucgr.D02215 Eucalyptus grandis HOM05D006814 ORTHO05D008613 2.9e-70 268.9 166 74.7
Sp7g16350 Schrenkiella parvula HOM05D006814 ORTHO05D008613 3.8e-70 268.5 166 74.7
ECA246G4850 Erigeron canadensis HOM05D006814 ORTHO05D008613 1.9e-69 266.2 180 73.3
Medtr8g447310 Medicago truncatula HOM05D006814 ORTHO05D008613 3.2e-69 265.4 163 75.5
Ca_26271_v3 Cicer arietinum L. HOM05D006814 ORTHO05D008613 5.4e-69 264.6 163 75.5
Os06g0132600 Oryza sativa ssp. japonica HOM05D006814 ORTHO05D008613 7.1e-69 264.2 165 75.8
THA.LOC104798334 Tarenaya hassleriana HOM05D006814 ORTHO05D008613 4.6e-68 261.5 166 73.5
Psat4g131760 Pisum sativum HOM05D006814 ORTHO05D008613 1.0e-67 260.4 163 74.2
TPR.G8183 Trifolium pratense HOM05D006814 ORTHO05D008613 1.3e-67 260.0 161 75.2
Lj3g0020867 Lotus japonicus HOM05D006814 ORTHO05D008613 5.1e-67 258.1 160 75.0
VMungo0251G2608 Vigna mungo HOM05D006814 ORTHO05D008613 1.9e-66 256.1 160 75.0
Sc07g0008590 Simmondsia chinensis HOM05D006814 ORTHO05D008613 2.5e-66 255.8 167 73.7
arahy.Tifrunner.gnm1.ann1.DD0PLV Arachis hypogaea HOM05D006814 ORTHO05D008613 3.3e-66 255.4 166 71.7
Haze_08181 Corylus avellana HOM05D006814 ORTHO05D008613 3.3e-66 255.4 169 75.7
Zm00001eb269700 Zea mays HOM05D006814 ORTHO05D008613 3.3e-66 255.4 166 71.7
C07p49120 Brassica napus HOM05D006814 ORTHO05D008613 4.3e-66 255.0 191 66.0
CDE11G0551 Ceratophyllum demersum HOM05D006814 ORTHO05D008613 4.3e-66 255.0 167 70.1
AUR62018677 Chenopodium quinoa HOM05D006814 ORTHO05D008613 4.3e-66 255.0 167 75.4
arahy.Tifrunner.gnm1.ann1.S7AV19 Arachis hypogaea HOM05D006814 ORTHO05D008613 5.6e-66 254.6 166 70.5
COL.COLO4_16971 Corchorus olitorius HOM05D006814 ORTHO05D008613 2.1e-65 252.7 145 82.1
Phvul.003G283200 Phaseolus vulgaris HOM05D006814 ORTHO05D008613 2.1e-65 252.7 167 72.5
QL12p004459 Quercus lobata HOM05D006814 ORTHO05D008613 5.3e-64 248.1 186 68.8
EL10Ac5g12048 Beta vulgaris HOM05D006814 ORTHO05D008613 2.6e-63 245.7 170 73.5
Glyma.20G095300 Glycine max HOM05D006814 ORTHO05D008613 1.7e-62 243.0 164 72.6
ATR0772G225 Amborella trichopoda HOM05D006814 ORTHO05D008613 4.2e-61 238.4 159 71.7
Lalb_Chr05g0228761 Lupinus albus HOM05D006814 ORTHO05D008613 4.6e-60 235.0 158 67.7
Prupe.4G270400 Prunus persica HOM05D006814 ORTHO05D008613 1.4e-56 223.4 128 82.0
SEGI_31198 Sequoiadendron giganteum HOM05D006814 ORTHO05D008613 4.0e-56 221.9 159 65.4
Pp3c10_20230 Physcomitrium patens HOM05D006814 ORTHO05D008613 8.2e-49 197.6 156 57.7
AagrBONN_evm.TU.Sc2ySwM_228.215 Anthoceros agrestis HOM05D006814 ORTHO05D008613 4.2e-45 185.3 153 57.5
SMO358G0599 Selaginella moellendorffii HOM05D006814 ORTHO05D008613 5.5e-45 184.9 156 56.4
Mapoly0097s0033 Marchantia polymorpha HOM05D006814 ORTHO05D008613 1.4e-43 180.3 159 57.2
GSVIVG01003310001 Vitis vinifera HOM05D006814 ORTHO05D008613 9.7e-34 147.5 100 70.0
Hma1.2p1_0586F.1_g183890 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 7.7e-31 137.9 118 63.6
Actinidia25985 Actinidia chinensis HOM05D006814 ORTHO05D008613 1.2e-28 130.6 72 87.5
CBR_g3124 Chara braunii HOM05D006814 ORTHO05D008613 1.6e-23 113.6 114 49.1
AT4G17760 Arabidopsis thaliana HOM05D006814 ORTHO05D008613 2.5e-13 79.7 55 61.8
PRCOL_00006064 Prasinoderma coloniale HOM05D006814 ORTHO05D008613 2.7e-12 76.3 144 34.7
Glyma.10G145666 Glycine max HOM05D006814 ORTHO05D008613 8.8e-11 71.2 49 65.3
EL10As1g23070 Beta vulgaris HOM05D006814 ORTHO05D088401 1.5e-10 70.5 40 82.5
Cre03.g162250 Chlamydomonas reinhardtii HOM05D006814 ORTHO05D008613 1.2e-07 60.8 119 32.8


User provided reference genes

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